FFCP PHASE1:Hg19::chr15:39880843..39880887,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39880843..39880887,- | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39880843..39880887,- | |description=CAGE_peak_at_chr15:39880843..39880887,- | ||
|id=chr15:39880843..39880887,- | |id=chr15:39880843..39880887,- | ||
|ontology_enrichment_celltype=CL:0000055!6.58e-19!180;CL:0002371!1.21e-16!591;CL:0000057!2.09e-15!75;CL:0000144!1.47e-14!625;CL:0000548!6.47e-13!679;CL:0000004!6.47e-13!679;CL:0000255!6.47e-13!679;CL:0000012!8.39e-13!682;CL:0000222!2.50e-10!119;CL:0002334!1.79e-08!12;CL:0002139!5.56e-08!24;CL:0000003!5.93e-08!722;CL:0000220!1.37e-07!246;CL:0000723!1.56e-07!436;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0002321!2.72e-07!248;CL:0000048!4.72e-07!430;CL:0000034!5.49e-07!444 | |ontology_enrichment_celltype=CL:0000055!6.58e-19!180;CL:0002371!1.21e-16!591;CL:0000057!2.09e-15!75;CL:0000144!1.47e-14!625;CL:0000548!6.47e-13!679;CL:0000004!6.47e-13!679;CL:0000255!6.47e-13!679;CL:0000012!8.39e-13!682;CL:0000222!2.50e-10!119;CL:0002334!1.79e-08!12;CL:0002139!5.56e-08!24;CL:0000003!5.93e-08!722;CL:0000220!1.37e-07!246;CL:0000723!1.56e-07!436;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0002321!2.72e-07!248;CL:0000048!4.72e-07!430;CL:0000034!5.49e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0002334;4.76e-10;12!CL:0002139;9.35e-09;24!CL:0002620;3.61e-08;23!CL:0000349;4.80e-07;19!CL:0000057;5.85e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.38e-19,76;CL:0002334,4.25e-10,12;CL:0002139,8.85e-09,24;CL:0000723,2.45e-08,433;CL:0002620,5.02e-08,23;CL:0000034,1.01e-07,441;CL:0000048,1.11e-07,427;CL:0000349,4.73e-07,19;CL:0000115,8.64e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.32e-07;5!DOID:450;3.32e-07;5!DOID:66;3.32e-07;5!DOID:423;3.32e-07;5!DOID:0080000;3.32e-07;5!DOID:11722;3.32e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.51e-07,5;DOID:450,3.51e-07,5;DOID:66,3.51e-07,5;DOID:423,3.51e-07,5;DOID:0080000,3.51e-07,5;DOID:11722,3.51e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.53e-11!84;UBERON:0000055!1.03e-10!69;UBERON:0002049!1.28e-10!79;UBERON:0007798!1.28e-10!79;UBERON:0001981!3.11e-10!60;UBERON:0007500!3.11e-10!60;UBERON:0004537!3.11e-10!60;UBERON:0006965!3.11e-10!60;UBERON:0001637!4.96e-09!42;UBERON:0003509!4.96e-09!42;UBERON:0004572!4.96e-09!42;UBERON:0000490!6.19e-09!138;UBERON:0003102!1.57e-08!95;UBERON:0000486!1.82e-08!82;UBERON:0000468!2.69e-08!659;UBERON:0004535!1.41e-07!110;UBERON:0003914!1.51e-07!118;UBERON:0000914!1.65e-07!83;UBERON:0002329!1.65e-07!83;UBERON:0003077!1.65e-07!83;UBERON:0003059!1.65e-07!83;UBERON:0007282!1.65e-07!83;UBERON:0009618!1.65e-07!83;UBERON:0007285!1.65e-07!83;UBERON:0004573!2.88e-07!33;UBERON:0004571!2.88e-07!33;UBERON:0001009!3.20e-07!113;UBERON:0004923!4.50e-07!57 | |ontology_enrichment_uberon=UBERON:0004872!2.53e-11!84;UBERON:0000055!1.03e-10!69;UBERON:0002049!1.28e-10!79;UBERON:0007798!1.28e-10!79;UBERON:0001981!3.11e-10!60;UBERON:0007500!3.11e-10!60;UBERON:0004537!3.11e-10!60;UBERON:0006965!3.11e-10!60;UBERON:0001637!4.96e-09!42;UBERON:0003509!4.96e-09!42;UBERON:0004572!4.96e-09!42;UBERON:0000490!6.19e-09!138;UBERON:0003102!1.57e-08!95;UBERON:0000486!1.82e-08!82;UBERON:0000468!2.69e-08!659;UBERON:0004535!1.41e-07!110;UBERON:0003914!1.51e-07!118;UBERON:0000914!1.65e-07!83;UBERON:0002329!1.65e-07!83;UBERON:0003077!1.65e-07!83;UBERON:0003059!1.65e-07!83;UBERON:0007282!1.65e-07!83;UBERON:0009618!1.65e-07!83;UBERON:0007285!1.65e-07!83;UBERON:0004573!2.88e-07!33;UBERON:0004571!2.88e-07!33;UBERON:0001009!3.20e-07!113;UBERON:0004923!4.50e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.89e-08;6!UBERON:0002358;9.89e-08;6!UBERON:0003684;9.89e-08;6!UBERON:0001178;9.89e-08;6!UBERON:0002097;1.29e-07;41!UBERON:0002199;2.75e-07;46!UBERON:0002416;2.75e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.46e-10,68;UBERON:0004923,1.11e-09,66;UBERON:0003102,2.34e-09,99;UBERON:0002199,2.41e-09,46;UBERON:0002416,2.41e-09,46;UBERON:0007500,3.04e-09,59;UBERON:0001981,3.04e-09,59;UBERON:0004537,3.04e-09,59;UBERON:0006965,3.04e-09,59;UBERON:0002049,3.44e-09,78;UBERON:0007798,3.44e-09,78;UBERON:0002097,6.27e-09,41;UBERON:0004872,1.65e-08,83;UBERON:0003688,8.41e-08,6;UBERON:0002358,8.41e-08,6;UBERON:0003684,8.41e-08,6;UBERON:0001178,8.41e-08,6;UBERON:0001637,2.24e-07,42;UBERON:0003509,2.24e-07,42;UBERON:0004572,2.24e-07,42;UBERON:0004871,2.91e-07,8;UBERON:0005631,4.16e-07,14;UBERON:0000158,4.16e-07,14 | |||
|phase1_expression=13.0808433074801,12.631930909568,4.22863212287913,11.0080628188443,2.68176656656373,13.0850778615055,0,0,0,0.737201809504527,1.39560233594486,2.40285509343189,2.90143676051299,0.866364470720326,1.98838425436749,5.3786011716142,6.02694528023977,4.38186054232424,7.3189919818576,0,0.408001382488506,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0.401088894940283,0,0,0,0,0.436194716338694,0,0,0.929716147622738,0,0.309706370895104,3.45230870786581,0.512321413058201,0,2.75796544589295,0,0,1.50593871634084,0,0.224723484445085,1.22433556948361,0,0,0,0,0,4.64334781805734,0,0.622822248995575,1.7587406567972,0.521482918420201,0.217188844705117,1.81619850790011,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,4.2194645408365,0.722878304769133,1.00267582127178,4.49024208778554,0,3.40644409211845,0,0.665188192387692,0.527008714158756,0.130979075497713,0.728590576585084,0,0,0,0,0,0,0,0.198762407366705,0,1.73570250803797,0.56530794192401,6.71199097935849,9.07889538402223,0.626984899610432,2.06733407335463,0.71153252537342,0,3.62546385398232,1.52054421143703,7.56592378399325,3.67663080345869,19.4434067491622,2.05389375053383,0.673588117878509,1.68917220724983,0,0,1.28241220751285,0,0,0.872188104285069,10.4364109856017,2.78587125662075,3.04541115870403,4.30254931123221,0.709336764396714,0.560677600142307,0,16.0333906471154,0,0.538842688278752,1.79808093424805,0,1.15235184896,0.234321431833797,0,0,1.34503812496621,0,0.161872944368132,0,0.816616685019573,1.10550885580591,0.309977343527296,4.75201142912821,13.8469480395992,0,0,0,0.125118519871964,0,1.75591048352335,12.5659996277598,4.5071417671979,6.80593098960126,16.862625754753,4.48470516518992,4.02670612203168,9.00273288253207,1.44273540933814,7.72921620136887,2.04728541964749,3.03797398034279,1.16924406193438,4.03894038790583,2.48534726334208,0.80823028409406,6.74518225781567,0.806016785821122,4.0694542154517,1.35282597214308,2.45471508531751,0.860413786167011,0,0,0.116193942869518,0,0,0,3.12899064659632,32.1620469096443,0,7.89425477654364,11.5500717067134,0.236613600079688,0.168584690078102,0,0.220587945464788,0.653638332277218,0.474541238222193,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,2.19500570817251,0,2.71428225511403,1.01847289674383,0,0,0,0.115930404975077,0,2.16549671641611,5.55582615091933,8.37118269832232,0,0,0,0,0,0,1.00789276919316,0.992425680696705,4.38836761243957,2.03443756959773,3.06706143332169,0,0,0,0,0,0.126995788584338,0,0,0,0.719792448923265,0,0,0,0,0,0.517086863031111,0,1.690605505112,2.92531928243358,3.12022310734098,0.771622122786426,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0.325736184293735,1.06617584622764,0.791951872933429,0,0,0,0,0,0,2.39624855491583,5.7430967917057,0,1.30303176000821,1.2328579353023,0.358121926479791,0,0,0,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.613457458595699,2.50085260529839,1.62759014219841,28.6999788912514,26.7643483195743,25.0746839903956,15.11124253406,0.601892199455438,2.27407504055985,2.0694614258501,1.99267679560631,0.921845842708516,3.47534457872331,0.195801157462741,0,0,0,0.106727557803444,4.24378600024763,0,6.95497674658265,3.96972492510043,13.6581156226376,16.2782854771183,2.56278298511402,1.53512174720011,6.59501076688791,7.42090332224955,3.23840356985577,7.63515418846446,0.821271560138091,0.519254429183621,2.20799719073923,0,4.81215528727884,0.276242966807689,0.918515585316854,0.182091168006717,1.96686622439136,0,0,0,0,0,1.13733384070897,0.850468526382578,1.51141141271498,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0,0,0,0.650756789328606,0.309123034943167,0,0,0,0,4.82051789532479,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.580066775656914,0.170453254832202,0.890320356467374,0.495854746082934,1.15314040419064,0.893288987462089,0.4046311234222,0,4.09256050879832,0.6970372701606,0.924100740528266,0,0.869932992075073,0.9266210955196,0,0,0.632758849437452,1.33441135746677,0,0,0,0.78494864019923,2.87795932133304,0.274537029736055,0.942499218765491,0.404364963146632,0,0.421258456238981,0,3.1682753652067,1.05650146756755,1.09199929126389,1.27264888758341,0,0,9.95158462861829,1.31535265576129,0.578775534266688,0,1.01455188481352,1.239293992399,0.281695602532241,1.57752487424457,2.45622602532803,0,0,2.32218398827431,0.329294892959902,0,0,0,0,0,0.188287601553558,0.43050537267123,1.68471475667626,1.7737206141467,10.3375530093132,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,2.3874448473769,0.890894042497916,3.37876772309155,0,0,0,0,0,0,0,0,0.102268682502155,0,4.3545542272653,2.51631383212515,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr15:39880843..39880887,- | |short_description=p@chr15:39880843..39880887,- | ||
}} | }} |
Latest revision as of 01:16, 25 July 2015
Short description: | p@chr15:39880843..39880887, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39880843..39880887, - |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.38e-19 | 76 |
preadipocyte | 4.25e-10 | 12 |
endothelial cell of vascular tree | 8.85e-09 | 24 |
somatic stem cell | 2.45e-08 | 433 |
skin fibroblast | 5.02e-08 | 23 |
stem cell | 1.01e-07 | 441 |
multi fate stem cell | 1.11e-07 | 427 |
extraembryonic cell | 4.73e-07 | 19 |
endothelial cell | 8.64e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.46e-10 | 68 |
organ component layer | 1.11e-09 | 66 |
surface structure | 2.34e-09 | 99 |
integument | 2.41e-09 | 46 |
integumental system | 2.41e-09 | 46 |
epithelial tube open at both ends | 3.04e-09 | 59 |
blood vessel | 3.04e-09 | 59 |
blood vasculature | 3.04e-09 | 59 |
vascular cord | 3.04e-09 | 59 |
vasculature | 3.44e-09 | 78 |
vascular system | 3.44e-09 | 78 |
skin of body | 6.27e-09 | 41 |
splanchnic layer of lateral plate mesoderm | 1.65e-08 | 83 |
omentum | 8.41e-08 | 6 |
peritoneum | 8.41e-08 | 6 |
abdominal cavity | 8.41e-08 | 6 |
visceral peritoneum | 8.41e-08 | 6 |
artery | 2.24e-07 | 42 |
arterial blood vessel | 2.24e-07 | 42 |
arterial system | 2.24e-07 | 42 |
somatic layer of lateral plate mesoderm | 2.91e-07 | 8 |
extraembryonic membrane | 4.16e-07 | 14 |
membranous layer | 4.16e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.51e-07 | 5 |
myotonic disease | 3.51e-07 | 5 |
muscle tissue disease | 3.51e-07 | 5 |
myopathy | 3.51e-07 | 5 |
muscular disease | 3.51e-07 | 5 |
myotonic dystrophy | 3.51e-07 | 5 |