FFCP PHASE1:Hg19::chr1:163116977..163117007,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:163116977..163117007,- | |||
|coexpression_cluster_id=C1252 | |||
|description=CAGE_peak_at_chr1:163116977..163117007,- | |description=CAGE_peak_at_chr1:163116977..163117007,- | ||
|id=chr1:163116977..163117007,- | |id=chr1:163116977..163117007,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002543;2.77e-08;6!CL:0002618;8.27e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002543,2.64e-08,6;CL:0002618,8.00e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.68e-13;4!UBERON:0007284;3.68e-13;4!UBERON:0004874;4.45e-07;1!UBERON:0010226;6.60e-07;1!UBERON:0005754;6.60e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.96e-60!115;UBERON:0001049!5.50e-23!57;UBERON:0005068!5.50e-23!57;UBERON:0006241!5.50e-23!57;UBERON:0007135!5.50e-23!57;UBERON:0003075!7.12e-22!86;UBERON:0007284!7.12e-22!86;UBERON:0001017!1.48e-20!82;UBERON:0002616!1.55e-20!59;UBERON:0002346!2.90e-20!90;UBERON:0005743!4.45e-20!86;UBERON:0002780!9.36e-20!41;UBERON:0001890!9.36e-20!41;UBERON:0006240!9.36e-20!41;UBERON:0000073!2.82e-19!94;UBERON:0001016!2.82e-19!94;UBERON:0003080!4.44e-19!42;UBERON:0000955!7.00e-19!69;UBERON:0006238!7.00e-19!69;UBERON:0002020!5.82e-17!34;UBERON:0003528!5.82e-17!34;UBERON:0002619!1.56e-16!22;UBERON:0001893!1.76e-16!34;UBERON:0002791!7.84e-16!33;UBERON:0000025!2.12e-15!194;UBERON:0001869!8.34e-15!32;UBERON:0001950!1.14e-14!20;UBERON:0000956!5.80e-14!25;UBERON:0000203!5.80e-14!25;UBERON:0004111!1.24e-13!241;UBERON:0003056!2.03e-13!61;UBERON:0000477!1.41e-12!286;UBERON:0004121!2.61e-11!169;UBERON:0000153!3.64e-11!129;UBERON:0007811!3.64e-11!129;UBERON:0000924!1.06e-10!173;UBERON:0006601!1.06e-10!173;UBERON:0000033!3.13e-10!123;UBERON:0000119!8.60e-10!312;UBERON:0000483!1.11e-09!309;UBERON:0001871!2.14e-08!7;UBERON:0000481!9.16e-08!347;UBERON:0002298!1.77e-07!8;UBERON:0000468!2.88e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.24e-17;3!UBERON:0000946;2.24e-17;3!UBERON:0002133;5.20e-12;2!UBERON:0004151;2.22e-08;3!UBERON:0000989;4.45e-07;1!UBERON:0002146;4.45e-07;1!UBERON:0008811;4.45e-07;1!UBERON:0005623;4.45e-07;1!UBERON:0002084;6.60e-07;1!UBERON:0000998;6.60e-07;1!UBERON:0002134;6.60e-07;1!UBERON:0006868;6.60e-07;1!UBERON:0002082;6.60e-07;1!UBERON:0005208;6.60e-07;1!UBERON:0004145;6.60e-07;1!UBERON:0005946;6.60e-07;1!UBERON:0005965;6.60e-07;1!UBERON:0002078;6.60e-07;1!UBERON:0005795;9.21e-07;1!UBERON:0002135;9.21e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.85e-17,3;UBERON:0009751,1.85e-17,3;UBERON:0000946,1.85e-17,3;UBERON:0002523,1.85e-17,3;UBERON:0005983,1.85e-17,3;UBERON:0002165,1.85e-17,3;UBERON:0002062,1.85e-17,3;UBERON:0007280,1.85e-17,3;UBERON:0002133,4.43e-12,2;UBERON:0007023,2.85e-11,114;UBERON:0004151,2.07e-08,3;UBERON:0004797,9.68e-08,7;UBERON:0002146,4.33e-07,1;UBERON:0005623,4.33e-07,1;UBERON:0000989,4.58e-07,1;UBERON:0008811,4.58e-07,1;UBERON:0006258,4.58e-07,1;UBERON:0005876,4.58e-07,1;UBERON:0004874,4.58e-07,1;UBERON:0002134,5.75e-07,1;UBERON:0005208,5.75e-07,1;UBERON:0005946,5.75e-07,1;UBERON:0005965,5.75e-07,1;UBERON:0002078,5.75e-07,1;UBERON:0000998,6.43e-07,1;UBERON:0006868,6.43e-07,1;UBERON:0002084,6.80e-07,1;UBERON:0002082,6.80e-07,1;UBERON:0010226,6.80e-07,1;UBERON:0002135,8.97e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,1.42879565254528,1.57170560838319,0.112611480483322,0,0.949265659568129,1.46561395144326,0,0,0,0,0.12663051166458,0,0,0.354668382198357,1.12135520028461,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,3.79897366491817,0,0,0,0.239624855491583,3.44585807502342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0.284136146806413,0,0,0,0.994147647766298,0.281338832821026,0,0,4.43363357068786,16.1390870483366,0,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0,1.15425387755696,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,1.83309043480088,0,0,0,0.067401132980677,1.60515529459758,0,0,0,1.21390189767046,0.789168805698781,4.83962864194656,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.969890164884194,0,1.12990370390266,0,0,0.253243183823515,0,0,1.28071796843612,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0.136905378891993,0,0.429765441419957,0,2.79282401272254,7.79145441639724,3.58936512288407,0.199679000498991,0.429226048136571,0.446342914883745,0.403100834920358,0,0,0,0.0824158583811665,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0,1.24632101408756,0,0,0.121499113316049,0,0.630445658393585,0.0524545881349981,0,0,0,0.714695326373367,3.31045985182716,0,0,0.864221491201268,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0.320362237703084,0.314408610199332,1.65695622138878,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,3.05065662254908,0.500763722825999,0.573409195690071,0.554645257684261,0.124192805882767,0,0,0.303298235083296,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63814457288021,0,0,0,0,0,0,0,0,0,0.256916900385838,2.8339315265117,0.638535436228605,1.23069818544453,0,0.207471757392654,1.45328081068666,1.42769420259154,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0.546974809018219,0,7.44316767583941,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0.227662191351298,0,0,0,0.339848664884159,0.197318320688547,0,0,0.470958557103084,0,0,1.82631744101899,0,0,0.285906176706625,0,3.25475991030751,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,0,0.923965261706223,0,0,0,0,0,0,0,0,0.771741581079447,0.655678681511872,0,3.18692818280077,0,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0,0,0,0,0,0,0,0.860037498908708,0,0.271965960763659,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0.985123076837112,0.267964130156178,0,0.620597975171371,0.639701945702943,0.23806443146374,0.258355639344024,0,0,0.445530107947154,2.02117188958219,1.95945073107265,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.488965776731466,2.03448089157869,0.665756774185513,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,1.42879565254528,1.57170560838319,0.112611480483322,0,0.949265659568129,1.46561395144326,0,0,0,0,0.12663051166458,0,0,0.354668382198357,1.12135520028461,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,3.79897366491817,0,0,0,0.239624855491583,3.44585807502342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0,0.284136146806413,0,0,0,0.994147647766298,0.281338832821026,0,0,4.43363357068786,16.1390870483366,0,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0,0,1.15425387755696,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,1.83309043480088,0,0,0,0.067401132980677,1.60515529459758,0,0,0,1.21390189767046,0.789168805698781,4.83962864194656,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.969890164884194,0,1.12990370390266,0,0,0.253243183823515,0,0,1.28071796843612,0,0,0,0,0,0,0,0.271808412147228,0.209205692624666,0,0,0,0.136905378891993,0,0.429765441419957,0,2.79282401272254,7.79145441639724,3.58936512288407,0.199679000498991,0.429226048136571,0.446342914883745,0.403100834920358,0,0,0,0.0824158583811665,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0,1.24632101408756,0,0,0.121499113316049,0,0.630445658393585,0.0524545881349981,0,0,0,0.714695326373367,3.31045985182716,0,0,0.864221491201268,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0.320362237703084,0.314408610199332,1.65695622138878,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,3.05065662254908,0.500763722825999,0.573409195690071,0.554645257684261,0.124192805882767,0,0,0.303298235083296,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63814457288021,0,0,0,0,0,0,0,0,0,0.256916900385838,2.8339315265117,0.638535436228605,1.23069818544453,0,0.207471757392654,1.45328081068666,1.42769420259154,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0.546974809018219,0,7.44316767583941,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0.227662191351298,0,0,0,0.339848664884159,0.197318320688547,0,0,0.470958557103084,0,0,1.82631744101899,0,0,0.285906176706625,0,3.25475991030751,0,0,0,0,0,0,0,0,3.38709640152743,0,0,0,0,0,0,0,0.923965261706223,0,0,0,0,0,0,0,0,0.771741581079447,0.655678681511872,0,3.18692818280077,0,0.196308467114945,0,0.4226557275834,0,0.187967835959707,0,0,0,0,0,0,0,0.860037498908708,0,0.271965960763659,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0.985123076837112,0.267964130156178,0,0.620597975171371,0.639701945702943,0.23806443146374,0.258355639344024,0,0,0.445530107947154,2.02117188958219,1.95945073107265,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.488965776731466,2.03448089157869,0.665756774185513,0.805095174364105,0 | ||
|short_description=p@chr1:163116977..163117007,- | |short_description=p@chr1:163116977..163117007,- | ||
}} | }} |
Latest revision as of 23:47, 27 July 2015
Short description: | p@chr1:163116977..163117007, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:163116977..163117007, - |
Coexpression cluster: | C1252_aorta_heart_Mesothelial_neuroblastoma_Endothelial_rhabdomyosarcoma_bladder |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vein endothelial cell | 2.64e-08 | 6 |
endothelial cell of umbilical vein | 8.00e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
valve | 1.85e-17 | 3 |
cardiac mesenchyme | 1.85e-17 | 3 |
cardial valve | 1.85e-17 | 3 |
tunica intima | 1.85e-17 | 3 |
heart layer | 1.85e-17 | 3 |
endocardium | 1.85e-17 | 3 |
endocardial cushion | 1.85e-17 | 3 |
presumptive endocardium | 1.85e-17 | 3 |
atrioventricular valve | 4.43e-12 | 2 |
adult organism | 2.85e-11 | 114 |
cardiac chamber | 2.07e-08 | 3 |
blood vessel layer | 9.68e-08 | 7 |
pulmonary valve | 4.33e-07 | 1 |
semi-lunar valve | 4.33e-07 | 1 |
penis | 4.58e-07 | 1 |
intromittent organ | 4.58e-07 | 1 |
lateral plate mesenchyme | 4.58e-07 | 1 |
undifferentiated genital tubercle | 4.58e-07 | 1 |
somatopleure | 4.58e-07 | 1 |
tricuspid valve | 5.75e-07 | 1 |
right atrium valve | 5.75e-07 | 1 |
outflow tract of atrium | 5.75e-07 | 1 |
outflow part of right atrium | 5.75e-07 | 1 |
right cardiac atrium | 5.75e-07 | 1 |
seminal vesicle | 6.43e-07 | 1 |
seminal fluid secreting gland | 6.43e-07 | 1 |
heart left ventricle | 6.80e-07 | 1 |
cardiac ventricle | 6.80e-07 | 1 |
future cardiac ventricle | 6.80e-07 | 1 |
mitral valve | 8.97e-07 | 1 |