FFCP PHASE1:Hg19::chr1:17906670..17906682,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55160 | |EntrezGene=55160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25540 | |HGNC=25540 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HCE6 | |UniProt=Q9HCE6 | ||
|association_with_transcript=-365bp_to_ENST00000375415,NM_001011722,uc001bao.2,uc001bap.2_5end | |association_with_transcript=-365bp_to_ENST00000375415,NM_001011722,uc001bao.2,uc001bap.2_5end | ||
|cluster_id=chr1:17906670..17906682,+ | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_17_at_ARHGEF10L_5end | |description=CAGE_peak_17_at_ARHGEF10L_5end | ||
|id=chr1:17906670..17906682,+ | |id=chr1:17906670..17906682,+ | ||
|ontology_enrichment_celltype=CL:0000181!9.22e-11!12;CL:0000417!9.22e-11!12;CL:0000668!9.22e-11!12;CL:0000414!9.22e-11!12;CL:0000412!9.22e-11!12;CL:0000182!9.22e-11!12 | |ontology_enrichment_celltype=CL:0000181!9.22e-11!12;CL:0000417!9.22e-11!12;CL:0000668!9.22e-11!12;CL:0000414!9.22e-11!12;CL:0000412!9.22e-11!12;CL:0000182!9.22e-11!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.00e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.00e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004872;6.48e-20;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.86e-18!35;UBERON:0000160!3.64e-13!27;UBERON:0009854!3.66e-13!23;UBERON:0004921!1.30e-12!129;UBERON:0004185!1.30e-12!129;UBERON:0009497!4.21e-12!25;UBERON:0000015!4.21e-12!25;UBERON:0002423!4.21e-12!25;UBERON:0006235!4.21e-12!25;UBERON:0004161!4.21e-12!25;UBERON:0005057!8.58e-12!26;UBERON:0009856!1.69e-11!26;UBERON:0005172!4.16e-11!55;UBERON:0005173!4.16e-11!55;UBERON:0001007!6.14e-11!155;UBERON:0001555!6.14e-11!155;UBERON:0007026!6.14e-11!155;UBERON:0004119!9.92e-11!169;UBERON:0000925!9.92e-11!169;UBERON:0006595!9.92e-11!169;UBERON:0008835!1.06e-10!22;UBERON:0003894!1.06e-10!22;UBERON:0002417!8.90e-10!61;UBERON:0000916!8.90e-10!61;UBERON:0002107!2.24e-09!19;UBERON:0006925!2.24e-09!19;UBERON:0008836!2.24e-09!19;UBERON:0007499!2.66e-09!25;UBERON:0002106!2.96e-08!3;UBERON:0004854!2.96e-08!3;UBERON:0009034!2.96e-08!3;UBERON:0002095!2.96e-08!3;UBERON:0004782!2.96e-08!3;UBERON:0003281!2.96e-08!3;UBERON:0009664!2.96e-08!3;UBERON:0002296!2.96e-08!3;UBERON:0005602!2.96e-08!3;UBERON:0001179!2.96e-08!3;UBERON:0006293!2.96e-08!3;UBERON:0000059!1.30e-07!11;UBERON:0002075!4.87e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.81e-45;3!UBERON:0004177;2.08e-27;5!UBERON:0005057;2.08e-27;5!UBERON:0002075;2.25e-08;18!UBERON:0002107;6.59e-08;19!UBERON:0006925;6.59e-08;19!UBERON:0005172;1.41e-07;52!UBERON:0005173;1.41e-07;52!UBERON:0002417;3.13e-07;58!UBERON:0000916;3.13e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.81e-45,3;UBERON:0004854,7.81e-45,3;UBERON:0009034,7.81e-45,3;UBERON:0002095,7.81e-45,3;UBERON:0004782,7.81e-45,3;UBERON:0003281,7.81e-45,3;UBERON:0009664,7.81e-45,3;UBERON:0002296,7.81e-45,3;UBERON:0005602,7.81e-45,3;UBERON:0001179,7.81e-45,3;UBERON:0006293,7.81e-45,3;UBERON:0004177,6.48e-20,7;UBERON:0005057,6.48e-20,7;UBERON:0000945,1.44e-17,8;UBERON:0010039,1.44e-17,8;UBERON:0004457,4.54e-12,12;UBERON:0000042,4.54e-12,12;UBERON:0003887,4.54e-12,12;UBERON:0005172,2.40e-10,54;UBERON:0005173,2.40e-10,54;UBERON:0002417,2.30e-09,60;UBERON:0000916,2.30e-09,60;UBERON:0002075,2.25e-08,18;UBERON:0002107,6.59e-08,19;UBERON:0006925,6.59e-08,19;UBERON:0008836,6.59e-08,19;UBERON:0008835,5.91e-07,22;UBERON:0003894,5.91e-07,22 | |||
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|short_description=p17@ARHGEF10L | |short_description=p17@ARHGEF10L | ||
}} | }} |
Latest revision as of 22:06, 18 September 2015
Short description: | p17@ARHGEF10L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_ARHGEF10L_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | -365bp_to_ENST00000375415, NM_001011722, uc001bao.2, uc001bap.2_5end |
EntrezGene: | ARHGEF10L |
HGNC: | 25540 |
UniProt: | Q9HCE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.00e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.81e-45 | 3 |
gastrointestinal system mesentery | 7.81e-45 | 3 |
stomach region | 7.81e-45 | 3 |
mesentery | 7.81e-45 | 3 |
gastrointestinal system serosa | 7.81e-45 | 3 |
mesentery of stomach | 7.81e-45 | 3 |
gut mesentery | 7.81e-45 | 3 |
dorsal mesentery | 7.81e-45 | 3 |
dorsal mesogastrium | 7.81e-45 | 3 |
peritoneal cavity | 7.81e-45 | 3 |
spleen primordium | 7.81e-45 | 3 |
hemopoietic organ | 6.48e-20 | 7 |
immune organ | 6.48e-20 | 7 |
stomach | 1.44e-17 | 8 |
food storage organ | 1.44e-17 | 8 |
cavity lining | 4.54e-12 | 12 |
serous membrane | 4.54e-12 | 12 |
intraembryonic coelom | 4.54e-12 | 12 |
abdomen element | 2.40e-10 | 54 |
abdominal segment element | 2.40e-10 | 54 |
abdominal segment of trunk | 2.30e-09 | 60 |
abdomen | 2.30e-09 | 60 |
viscus | 2.25e-08 | 18 |
liver | 6.59e-08 | 19 |
digestive gland | 6.59e-08 | 19 |
liver bud | 6.59e-08 | 19 |
hepatic diverticulum | 5.91e-07 | 22 |
liver primordium | 5.91e-07 | 22 |