FFCP PHASE1:Hg19::chr1:183207499..183207519,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:183207499..183207519,+ | |||
|coexpression_cluster_id=C268 | |||
|description=CAGE_peak_at_chr1:183207499..183207519,+ | |description=CAGE_peak_at_chr1:183207499..183207519,+ | ||
|id=chr1:183207499..183207519,+ | |id=chr1:183207499..183207519,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.45e-23!43;CL:0000066!2.99e-21!254;CL:0000220!1.77e-15!246;CL:0002321!3.53e-15!248;CL:0000223!1.63e-14!59;CL:0002251!5.25e-12!21;CL:0002159!1.44e-11!13;CL:0002368!4.52e-11!13;CL:0000548!4.42e-10!679;CL:0000004!4.42e-10!679;CL:0000255!4.42e-10!679;CL:0000012!7.15e-10!682;CL:0000076!1.72e-08!62;CL:0000244!1.22e-07!4;CL:0000731!1.22e-07!4;CL:0000003!2.95e-07!722;CL:0002077!6.59e-07!33 | |ontology_enrichment_celltype=CL:0002076!1.45e-23!43;CL:0000066!2.99e-21!254;CL:0000220!1.77e-15!246;CL:0002321!3.53e-15!248;CL:0000223!1.63e-14!59;CL:0002251!5.25e-12!21;CL:0002159!1.44e-11!13;CL:0002368!4.52e-11!13;CL:0000548!4.42e-10!679;CL:0000004!4.42e-10!679;CL:0000255!4.42e-10!679;CL:0000012!7.15e-10!682;CL:0000076!1.72e-08!62;CL:0000244!1.22e-07!4;CL:0000731!1.22e-07!4;CL:0000003!2.95e-07!722;CL:0002077!6.59e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.47e-27;14!CL:0000244;4.08e-21;4!CL:0000731;4.08e-21;4!CL:0002076;2.29e-20;42!CL:0002368;5.63e-18;13!CL:0002166;4.12e-16;3!CL:0002621;4.56e-16;3!CL:0000362;7.11e-14;9!CL:0000240;1.56e-13;6!CL:0000311;1.56e-13;6!CL:0000079;1.56e-13;6!CL:0000237;1.56e-13;6!CL:0002327;2.42e-11;4!CL:0000317;3.69e-11;2!CL:1000448;3.69e-11;2!CL:0002308;3.69e-11;2!CL:0002140;3.69e-11;2!CL:0002536;6.10e-11;2!CL:0002596;3.23e-10;2!CL:0000312;1.21e-09;5!CL:0002077;1.39e-09;34!CL:0002251;1.68e-08;20!CL:0002231;1.16e-07;3!CL:0000307;1.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.08e-27,14;CL:0002076,2.27e-23,42;CL:0000244,4.76e-21,4;CL:0000731,4.76e-21,4;CL:0000066,2.52e-18,253;CL:0002368,4.89e-18,13;CL:0002166,2.82e-16,3;CL:0000223,5.27e-16,58;CL:0002621,7.01e-16,3;CL:0000362,6.74e-14,9;CL:0000240,1.28e-13,6;CL:0000311,1.28e-13,6;CL:0000079,1.28e-13,6;CL:0000237,1.28e-13,6;CL:0000036,1.28e-13,6;CL:0000357,1.28e-13,6;CL:0000114,1.28e-13,6;CL:0002327,2.38e-11,4;CL:0000317,4.30e-11,2;CL:1000448,4.30e-11,2;CL:0002308,4.30e-11,2;CL:0002140,4.30e-11,2;CL:0002536,4.75e-11,2;CL:0002077,1.80e-10,34;CL:0002596,3.08e-10,2;CL:0002321,3.45e-10,250;CL:0000312,1.05e-09,5;CL:0002251,2.09e-08,20;CL:0002231,1.18e-07,3;CL:0000068,1.54e-07,3;CL:0000069,1.54e-07,3;CL:0000307,1.54e-07,3;CL:0000377,1.54e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;1.56e-13;6!CL:0000114;1.56e-13;6!CL:0000223;3.71e-10;58!CL:0000377;1.44e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!1.05e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005910!7.25e-09!6;UBERON:0005631!1.89e-08!14;UBERON:0000158!1.89e-08!14;UBERON:0000365!3.33e-08!5;UBERON:0003729!2.28e-07!5;UBERON:0000486!9.50e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.87e-20;12!UBERON:0000365;6.37e-17;5!UBERON:0001949;4.56e-16;3!UBERON:0005910;4.04e-14;6!UBERON:0001708;3.30e-12;4!UBERON:0008895;3.30e-12;4!UBERON:0001911;2.42e-11;4!UBERON:0002419;3.69e-11;2!UBERON:0007771;3.69e-11;2!UBERON:0003297;3.69e-11;2!UBERON:0001821;3.69e-11;2!UBERON:0003487;3.69e-11;2!UBERON:0001820;3.69e-11;2!UBERON:0005396;3.23e-10;2!UBERON:0011159;7.43e-10;5!UBERON:0003729;1.80e-09;13!UBERON:0010371;3.81e-09;31!UBERON:0001003;3.26e-08;15!UBERON:0007376;3.26e-08;15!UBERON:0003929;3.89e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,7.20e-17,5;UBERON:0001949,7.01e-16,3;UBERON:0005910,4.47e-14,6;UBERON:0001708,2.49e-12,4;UBERON:0008895,2.49e-12,4;UBERON:0001911,2.38e-11,4;UBERON:0005333,2.38e-11,4;UBERON:0008425,2.38e-11,4;UBERON:0005311,2.38e-11,4;UBERON:0002419,4.30e-11,2;UBERON:0007771,4.30e-11,2;UBERON:0003297,4.30e-11,2;UBERON:0001821,4.30e-11,2;UBERON:0003487,4.30e-11,2;UBERON:0001820,4.30e-11,2;UBERON:0005089,4.30e-11,2;UBERON:0005088,4.30e-11,2;UBERON:0005396,3.08e-10,2;UBERON:0011159,5.94e-10,5;UBERON:0003102,2.24e-09,99;UBERON:0003729,2.30e-09,13;UBERON:0010188,2.31e-08,6;UBERON:0002539,2.31e-08,6;UBERON:0008816,2.31e-08,6;UBERON:0001003,3.16e-08,15;UBERON:0007376,3.16e-08,15;UBERON:0007383,3.16e-08,15;UBERON:0004119,5.49e-07,160;UBERON:0000925,5.49e-07,160;UBERON:0006595,5.49e-07,160 | |||
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|short_description=p@chr1:183207499..183207519,+ | |short_description=p@chr1:183207499..183207519,+ | ||
}} | }} |
Latest revision as of 01:10, 28 July 2015
Short description: | p@chr1:183207499..183207519, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183207499..183207519, + |
Coexpression cluster: | C268_Mallassezderived_Urothelial_Gingival_Small_Bronchial_Tracheal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 7.20e-17 | 5 |
gingival epithelium | 7.01e-16 | 3 |
transitional epithelium | 4.47e-14 | 6 |
jaw skeleton | 2.49e-12 | 4 |
splanchnocranium | 2.49e-12 | 4 |
mammary gland | 2.38e-11 | 4 |
mammary bud | 2.38e-11 | 4 |
mammary ridge | 2.38e-11 | 4 |
mammary placode | 2.38e-11 | 4 |
skin gland | 4.30e-11 | 2 |
epidermis gland | 4.30e-11 | 2 |
gland of integumental system | 4.30e-11 | 2 |
sebaceous gland | 4.30e-11 | 2 |
skin sebaceous gland | 4.30e-11 | 2 |
sweat gland | 4.30e-11 | 2 |
sweat gland placode | 4.30e-11 | 2 |
sebaceous gland placode | 4.30e-11 | 2 |
carotid artery segment | 3.08e-10 | 2 |
primary subdivision of cranial skeletal system | 5.94e-10 | 5 |
surface structure | 2.24e-09 | 99 |
mouth mucosa | 2.30e-09 | 13 |
protuberance | 2.31e-08 | 6 |
pharyngeal arch | 2.31e-08 | 6 |
embryonic head | 2.31e-08 | 6 |
skin epidermis | 3.16e-08 | 15 |
outer epithelium | 3.16e-08 | 15 |
enveloping layer of ectoderm | 3.16e-08 | 15 |
endoderm-derived structure | 5.49e-07 | 160 |
endoderm | 5.49e-07 | 160 |
presumptive endoderm | 5.49e-07 | 160 |