FFCP PHASE1:Hg19::chr1:185409237..185409244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:185409237..185409244,- | |||
|coexpression_cluster_id=C110 | |||
|description=CAGE_peak_at_chr1:185409237..185409244,- | |description=CAGE_peak_at_chr1:185409237..185409244,- | ||
|id=chr1:185409237..185409244,- | |id=chr1:185409237..185409244,- | ||
|ontology_enrichment_celltype=CL:0000080!2.58e-15!6;CL:0000988!2.64e-11!182;CL:0000037!6.71e-10!172;CL:0000566!6.71e-10!172;CL:0000623!5.67e-09!3;CL:0000825!5.67e-09!3;CL:0000838!8.35e-09!52;CL:0000542!1.44e-08!53;CL:0000051!1.44e-08!53;CL:0000738!1.56e-08!140;CL:0002032!2.30e-08!165;CL:0000837!2.30e-08!165;CL:0000842!3.59e-08!3;CL:0002087!1.01e-07!119;CL:0002393!2.58e-07!9;CL:0002397!2.58e-07!9 | |ontology_enrichment_celltype=CL:0000080!2.58e-15!6;CL:0000988!2.64e-11!182;CL:0000037!6.71e-10!172;CL:0000566!6.71e-10!172;CL:0000623!5.67e-09!3;CL:0000825!5.67e-09!3;CL:0000838!8.35e-09!52;CL:0000542!1.44e-08!53;CL:0000051!1.44e-08!53;CL:0000738!1.56e-08!140;CL:0002032!2.30e-08!165;CL:0000837!2.30e-08!165;CL:0000842!3.59e-08!3;CL:0002087!1.01e-07!119;CL:0002393!2.58e-07!9;CL:0002397!2.58e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.05e-29;1!CL:0000911;2.05e-29;1!CL:0000814;2.05e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.20e-29,1;CL:0000914,4.20e-29,1;CL:0000911,4.20e-29,1;CL:0000814,4.20e-29,1;CL:0002042,4.20e-29,1;CL:0002039,4.20e-29,1;CL:0002040,4.20e-29,1;CL:0002041,4.20e-29,1;CL:0000893,2.74e-15,2;CL:0002489,2.74e-15,2;CL:0000809,2.74e-15,2;CL:0000808,2.74e-15,2;CL:0000894,2.74e-15,2;CL:0000806,2.74e-15,2;CL:0000807,2.74e-15,2;CL:0000805,2.74e-15,2;CL:0002425,2.74e-15,2 | |||
|ontology_enrichment_development_v019=CL:0002425;1.91e-15;2!UBERON:0007123;5.86e-07;5 | |||
|ontology_enrichment_disease=DOID:1749!8.87e-11!14;DOID:162!7.81e-10!235;DOID:14566!2.08e-09!239;DOID:0060058!2.87e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:3112;2.05e-29;1!DOID:1036;3.17e-15;8!DOID:1240;3.84e-09;39!DOID:2531;5.81e-08;51!DOID:0060083;5.81e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.78e-29,1;DOID:1036,3.29e-15,8;DOID:1240,4.44e-12,39;DOID:2531,2.38e-09,51;DOID:0060083,2.38e-09,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009722,3.14e-11,11;UBERON:0007690,3.14e-11,11;UBERON:0002370,2.61e-08,4;UBERON:0005058,2.61e-08,4;UBERON:0009113,2.61e-08,4;UBERON:0003295,2.61e-08,4;UBERON:0005562,2.61e-08,4;UBERON:0008814,3.14e-07,18;UBERON:0002046,5.70e-07,5;UBERON:0004117,5.70e-07,5;UBERON:0007689,5.70e-07,5;UBERON:0007123,5.70e-07,5;UBERON:0003091,5.70e-07,5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,1.40381113229099,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0.552700035571697,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0.394061520403854,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0,0,0,0,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,1.13852239634511,0.794682894901893,0,0,0,0,0,0,0,1.77912677208373,0.370691816839509,0.208843899010911,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0.138674673013139,0,0,0.34823682632161,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.674921674654501,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,5.58229141095505,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0.163565394255844,0.655219697692825,0,0,0.999936979274649,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.231051332300676,0,0,0,0,0,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr1:185409237..185409244,- | |short_description=p@chr1:185409237..185409244,- | ||
}} | }} |
Latest revision as of 01:27, 28 July 2015
Short description: | p@chr1:185409237..185409244, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:185409237..185409244, - |
Coexpression cluster: | C110_leukemia_chronic_Eosinophils_acute_Whole_CD34_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.20e-29 | 1 |
immature NK T cell | 4.20e-29 | 1 |
effector T cell | 4.20e-29 | 1 |
mature NK T cell | 4.20e-29 | 1 |
immature NK T cell stage IV | 4.20e-29 | 1 |
immature NK T cell stage I | 4.20e-29 | 1 |
immature NK T cell stage II | 4.20e-29 | 1 |
immature NK T cell stage III | 4.20e-29 | 1 |
thymocyte | 2.74e-15 | 2 |
double negative thymocyte | 2.74e-15 | 2 |
double-positive, alpha-beta thymocyte | 2.74e-15 | 2 |
DN4 thymocyte | 2.74e-15 | 2 |
DN1 thymic pro-T cell | 2.74e-15 | 2 |
DN2 thymocyte | 2.74e-15 | 2 |
DN3 thymocyte | 2.74e-15 | 2 |
immature single positive thymocyte | 2.74e-15 | 2 |
early T lineage precursor | 2.74e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
entire pharyngeal arch endoderm | 3.14e-11 | 11 |
early pharyngeal endoderm | 3.14e-11 | 11 |
thymus | 2.61e-08 | 4 |
hemolymphoid system gland | 2.61e-08 | 4 |
thymic region | 2.61e-08 | 4 |
pharyngeal gland | 2.61e-08 | 4 |
thymus primordium | 2.61e-08 | 4 |
pharyngeal arch system | 3.14e-07 | 18 |
thyroid gland | 5.70e-07 | 5 |
pharyngeal pouch | 5.70e-07 | 5 |
thyroid diverticulum | 5.70e-07 | 5 |
pharyngeal pouch 2 | 5.70e-07 | 5 |
thyroid primordium | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.78e-29 | 1 |
chronic leukemia | 3.29e-15 | 8 |
leukemia | 4.44e-12 | 39 |
hematologic cancer | 2.38e-09 | 51 |
immune system cancer | 2.38e-09 | 51 |