FFCP PHASE1:Hg19::chr1:208443938..208443947,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:208443938..208443947,- | |||
|coexpression_cluster_id=C1418 | |||
|description=CAGE_peak_at_chr1:208443938..208443947,- | |description=CAGE_peak_at_chr1:208443938..208443947,- | ||
|id=chr1:208443938..208443947,- | |id=chr1:208443938..208443947,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.44e-09;6!CL:0000404;1.44e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.32e-09,6;CL:0000031,1.32e-09,6;CL:0000404,1.32e-09,6;CL:0000047,1.59e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.44e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.68e-71!41;UBERON:0001890!4.68e-71!41;UBERON:0006240!4.68e-71!41;UBERON:0003080!2.44e-69!42;UBERON:0001869!1.59e-64!32;UBERON:0002619!1.47e-61!22;UBERON:0001893!1.08e-60!34;UBERON:0001950!9.52e-58!20;UBERON:0002791!9.64e-55!33;UBERON:0000956!3.16e-54!25;UBERON:0000203!3.16e-54!25;UBERON:0002020!4.13e-53!34;UBERON:0003528!4.13e-53!34;UBERON:0001049!1.14e-50!57;UBERON:0005068!1.14e-50!57;UBERON:0006241!1.14e-50!57;UBERON:0007135!1.14e-50!57;UBERON:0002616!6.92e-49!59;UBERON:0003056!3.24e-47!61;UBERON:0001017!1.15e-46!82;UBERON:0000955!1.66e-45!69;UBERON:0006238!1.66e-45!69;UBERON:0005743!2.10e-44!86;UBERON:0000073!5.35e-40!94;UBERON:0001016!5.35e-40!94;UBERON:0003075!1.27e-36!86;UBERON:0007284!1.27e-36!86;UBERON:0000200!1.53e-36!6;UBERON:0002346!7.05e-35!90;UBERON:0007023!3.11e-33!115;UBERON:0001871!2.30e-27!7;UBERON:0000033!2.31e-27!123;UBERON:0002771!3.56e-27!3;UBERON:0000153!5.78e-26!129;UBERON:0007811!5.78e-26!129;UBERON:0004121!3.64e-21!169;UBERON:0000924!1.31e-20!173;UBERON:0006601!1.31e-20!173;UBERON:0002021!4.83e-16!5;UBERON:0000349!7.30e-16!5;UBERON:0000025!6.30e-13!194;UBERON:0001894!1.82e-11!7;UBERON:0006222!1.82e-11!7;UBERON:0002022!1.65e-10!1;UBERON:0003112!2.16e-10!1;UBERON:0000032!2.16e-10!1;UBERON:0005253!2.16e-10!1;UBERON:0003128!2.16e-10!1;UBERON:0002241!2.16e-10!1;UBERON:0001703!2.16e-10!1;UBERON:0004761!2.16e-10!1;UBERON:0009617!2.16e-10!1;UBERON:0007190!2.84e-10!1;UBERON:0001882!4.44e-10!1;UBERON:0005403!4.44e-10!1;UBERON:0002581!5.79e-10!1;UBERON:0002902!6.91e-10!1;UBERON:0009899!6.91e-10!1;UBERON:0004111!8.58e-10!241;UBERON:0001874!8.99e-10!1;UBERON:0000369!1.59e-09!4;UBERON:0002435!1.59e-09!4;UBERON:0000204!1.59e-09!4;UBERON:0010082!1.59e-09!4;UBERON:0002420!4.39e-09!9;UBERON:0007245!4.39e-09!9;UBERON:0010009!4.39e-09!9;UBERON:0010011!4.39e-09!9;UBERON:0000454!4.39e-09!9;UBERON:0000477!7.25e-09!286;UBERON:0000483!6.09e-08!309;UBERON:0001872!6.31e-08!5;UBERON:0000119!7.83e-08!312;UBERON:0000064!2.26e-07!219;UBERON:0000475!4.30e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002022;1.46e-50;1!UBERON:0003112;3.99e-50;1!UBERON:0011158;3.99e-50;1!UBERON:0003128;3.99e-50;1!UBERON:0001703;3.99e-50;1!UBERON:0002241;3.99e-50;1!UBERON:0011159;3.26e-11;5!UBERON:0001950;1.61e-10;20!UBERON:0002619;1.07e-09;22!UBERON:0000956;1.07e-08;25!UBERON:0000203;1.07e-08;25!UBERON:0001871;2.18e-08;6!UBERON:0003129;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002022,1.46e-50,1;UBERON:0003112,6.58e-50,1;UBERON:0011158,6.58e-50,1;UBERON:0003128,6.58e-50,1;UBERON:0001703,6.58e-50,1;UBERON:0002241,6.58e-50,1;UBERON:0004761,6.58e-50,1;UBERON:0009617,6.58e-50,1;UBERON:0005253,9.18e-26,2;UBERON:0011159,3.60e-11,5;UBERON:0001950,1.61e-10,20;UBERON:0002619,1.07e-09,22;UBERON:0000956,1.07e-08,25;UBERON:0000203,1.07e-08,25;UBERON:0001871,2.18e-08,6;UBERON:0003129,2.35e-08,7;UBERON:0002791,4.60e-07,32;UBERON:0001869,4.60e-07,32 | |||
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|short_description=p@chr1:208443938..208443947,- | |short_description=p@chr1:208443938..208443947,- | ||
}} | }} |
Latest revision as of 03:16, 28 July 2015
Short description: | p@chr1:208443938..208443947, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:208443938..208443947, - |
Coexpression cluster: | C1418_insula_temporal_frontal_brain_occipital_paracentral_nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.32e-09 | 6 |
neuroblast | 1.32e-09 | 6 |
electrically signaling cell | 1.32e-09 | 6 |
neuronal stem cell | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
insula | 1.46e-50 | 1 |
olfactory region | 6.58e-50 | 1 |
primary subdivision of skull | 6.58e-50 | 1 |
cranium | 6.58e-50 | 1 |
neurocranium | 6.58e-50 | 1 |
chondrocranium | 6.58e-50 | 1 |
cartilaginous neurocranium | 6.58e-50 | 1 |
head paraxial mesoderm | 6.58e-50 | 1 |
head mesenchyme | 9.18e-26 | 2 |
primary subdivision of cranial skeletal system | 3.60e-11 | 5 |
neocortex | 1.61e-10 | 20 |
regional part of cerebral cortex | 1.07e-09 | 22 |
cerebral cortex | 1.07e-08 | 25 |
pallium | 1.07e-08 | 25 |
temporal lobe | 2.18e-08 | 6 |
skull | 2.35e-08 | 7 |
regional part of telencephalon | 4.60e-07 | 32 |
cerebral hemisphere | 4.60e-07 | 32 |