FFCP PHASE1:Hg19::chr15:77861183..77861202,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-109bp_to_ENST00000560590,ENST00000561123_5end | |association_with_transcript=-109bp_to_ENST00000560590,ENST00000561123_5end | ||
|cluster_id=chr15:77861183..77861202,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_2_at_ENST00000560590_5end,CAGE_peak_2_at_ENST00000561123_5end | |description=CAGE_peak_2_at_ENST00000560590_5end,CAGE_peak_2_at_ENST00000561123_5end | ||
|id=chr15:77861183..77861202,+ | |id=chr15:77861183..77861202,+ | ||
|ontology_enrichment_celltype=CL:0000148!2.24e-27!10;CL:0000541!2.24e-27!10;CL:0000147!1.99e-19!14;CL:0000710!1.89e-13!20;CL:0002567!1.97e-11!3;CL:0000075!7.96e-10!27;CL:0002566!3.31e-09!1;CL:0002077!6.13e-08!33;CL:0000333!6.51e-08!41;CL:0000453!7.48e-07!5 | |ontology_enrichment_celltype=CL:0000148!2.24e-27!10;CL:0000541!2.24e-27!10;CL:0000147!1.99e-19!14;CL:0000710!1.89e-13!20;CL:0002567!1.97e-11!3;CL:0000075!7.96e-10!27;CL:0002566!3.31e-09!1;CL:0002077!6.13e-08!33;CL:0000333!6.51e-08!41;CL:0000453!7.48e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.92e-53;3!CL:0002566;1.81e-40;1!CL:0000148;3.05e-36;10!CL:0000147;3.45e-26;14!CL:0000710;1.26e-18;20!CL:0000075;4.96e-14;27!CL:0002077;1.67e-09;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.68e-53,3;CL:0002566,9.91e-41,1;CL:0000148,2.40e-36,10;CL:0000541,2.40e-36,10;CL:0000147,2.90e-26,14;CL:0000710,1.12e-18,20;CL:0000075,4.53e-14,27;CL:0002077,2.39e-11,34;CL:0000333,3.87e-09,41 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.49e-16!57;UBERON:0005068!6.49e-16!57;UBERON:0006241!6.49e-16!57;UBERON:0007135!6.49e-16!57;UBERON:0002346!3.77e-13!90;UBERON:0002616!9.46e-13!59;UBERON:0003076!4.85e-12!15;UBERON:0003057!4.85e-12!15;UBERON:0003075!8.04e-12!86;UBERON:0007284!8.04e-12!86;UBERON:0005743!1.16e-11!86;UBERON:0000988!8.06e-11!3;UBERON:0000955!1.73e-10!69;UBERON:0006238!1.73e-10!69;UBERON:0000073!2.32e-10!94;UBERON:0001016!2.32e-10!94;UBERON:0001017!2.45e-10!82;UBERON:0004733!6.82e-10!12;UBERON:0002028!6.82e-10!12;UBERON:0007277!6.82e-10!12;UBERON:0004732!3.83e-09!13;UBERON:0002298!9.27e-09!8;UBERON:0002336!1.13e-08!1;UBERON:0001018!1.13e-08!1;UBERON:0002473!1.13e-08!1;UBERON:0005340!1.13e-08!1;UBERON:0002316!1.13e-08!1;UBERON:0003544!1.13e-08!1;UBERON:0001020!1.13e-08!1;UBERON:0005970!1.13e-08!1;UBERON:0002437!1.13e-08!1;UBERON:0007190!1.78e-08!1;UBERON:0002022!2.22e-08!1;UBERON:0002680!7.02e-08!9;UBERON:0001895!7.02e-08!9;UBERON:0010092!7.02e-08!9;UBERON:0002780!1.01e-07!41;UBERON:0001890!1.01e-07!41;UBERON:0006240!1.01e-07!41;UBERON:0003080!1.59e-07!42;UBERON:0007023!4.81e-07!115;UBERON:0001893!5.55e-07!34 | |ontology_enrichment_uberon=UBERON:0001049!6.49e-16!57;UBERON:0005068!6.49e-16!57;UBERON:0006241!6.49e-16!57;UBERON:0007135!6.49e-16!57;UBERON:0002346!3.77e-13!90;UBERON:0002616!9.46e-13!59;UBERON:0003076!4.85e-12!15;UBERON:0003057!4.85e-12!15;UBERON:0003075!8.04e-12!86;UBERON:0007284!8.04e-12!86;UBERON:0005743!1.16e-11!86;UBERON:0000988!8.06e-11!3;UBERON:0000955!1.73e-10!69;UBERON:0006238!1.73e-10!69;UBERON:0000073!2.32e-10!94;UBERON:0001016!2.32e-10!94;UBERON:0001017!2.45e-10!82;UBERON:0004733!6.82e-10!12;UBERON:0002028!6.82e-10!12;UBERON:0007277!6.82e-10!12;UBERON:0004732!3.83e-09!13;UBERON:0002298!9.27e-09!8;UBERON:0002336!1.13e-08!1;UBERON:0001018!1.13e-08!1;UBERON:0002473!1.13e-08!1;UBERON:0005340!1.13e-08!1;UBERON:0002316!1.13e-08!1;UBERON:0003544!1.13e-08!1;UBERON:0001020!1.13e-08!1;UBERON:0005970!1.13e-08!1;UBERON:0002437!1.13e-08!1;UBERON:0007190!1.78e-08!1;UBERON:0002022!2.22e-08!1;UBERON:0002680!7.02e-08!9;UBERON:0001895!7.02e-08!9;UBERON:0010092!7.02e-08!9;UBERON:0002780!1.01e-07!41;UBERON:0001890!1.01e-07!41;UBERON:0006240!1.01e-07!41;UBERON:0003080!1.59e-07!42;UBERON:0007023!4.81e-07!115;UBERON:0001893!5.55e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.10e-09;5!UBERON:0005388;3.10e-09;5!UBERON:0001802;3.10e-09;5!UBERON:0000970;6.17e-09;20!UBERON:0002104;1.48e-08;21!UBERON:0000020;6.75e-08;23!UBERON:0001032;1.31e-07;24!UBERON:0004456;1.31e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.59e-08,21;UBERON:0002104,1.59e-08,21;UBERON:0000966,6.78e-08,6;UBERON:0005388,6.78e-08,6;UBERON:0001802,6.78e-08,6;UBERON:0000020,1.40e-07,24;UBERON:0001032,1.40e-07,24;UBERON:0004456,1.40e-07,24 | |||
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|short_description=p2@ENST00000560590,p2@ENST00000561123 | |short_description=p2@ENST00000560590,p2@ENST00000561123 | ||
}} | }} |
Latest revision as of 04:29, 25 July 2015
Short description: | p2@ENST00000560590, p2@ENST00000561123 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000560590_5end, CAGE_peak_2_at_ENST00000561123_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -109bp_to_ENST00000560590, ENST00000561123_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.68e-53 | 3 |
dark melanocyte | 9.91e-41 | 1 |
melanocyte | 2.40e-36 | 10 |
melanoblast | 2.40e-36 | 10 |
pigment cell | 2.90e-26 | 14 |
neurecto-epithelial cell | 1.12e-18 | 20 |
columnar/cuboidal epithelial cell | 4.53e-14 | 27 |
ecto-epithelial cell | 2.39e-11 | 34 |
migratory neural crest cell | 3.87e-09 | 41 |
Ontology term | p-value | n |
---|---|---|
eye | 1.59e-08 | 21 |
visual system | 1.59e-08 | 21 |
retina | 6.78e-08 | 6 |
photoreceptor array | 6.78e-08 | 6 |
posterior segment of eyeball | 6.78e-08 | 6 |
sense organ | 1.40e-07 | 24 |
sensory system | 1.40e-07 | 24 |
entire sense organ system | 1.40e-07 | 24 |