FFCP PHASE1:Hg19::chr15:88120158..88120161,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=145978 | |EntrezGene=145978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26455 | |HGNC=26455 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560153,NR_026869,uc002bmc.1_5end | |association_with_transcript=0bp_to_ENST00000560153,NR_026869,uc002bmc.1_5end | ||
|cluster_id=chr15:88120158..88120161,+ | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_1_at_LINC00052_5end | |description=CAGE_peak_1_at_LINC00052_5end | ||
|id=chr15:88120158..88120161,+ | |id=chr15:88120158..88120161,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.21e-16!254;CL:0000221!3.31e-09!71;CL:0002319!3.65e-09!25;CL:0000095!3.38e-08!17;CL:0000123!3.38e-08!17;CL:0000133!6.69e-08!59;CL:0000243!7.60e-07!15;CL:0000125!7.60e-07!15;CL:0000030!7.60e-07!15;CL:0000339!7.60e-07!15 | |ontology_enrichment_celltype=CL:0000066!1.21e-16!254;CL:0000221!3.31e-09!71;CL:0002319!3.65e-09!25;CL:0000095!3.38e-08!17;CL:0000123!3.38e-08!17;CL:0000133!6.69e-08!59;CL:0000243!7.60e-07!15;CL:0000125!7.60e-07!15;CL:0000030!7.60e-07!15;CL:0000339!7.60e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.17e-10;5!CL:0000128;9.20e-09;7!CL:0000126;9.20e-09;7!CL:0000127;9.20e-09;7!CL:0000095;1.73e-08;17!CL:0002605;1.99e-08;3!CL:0000064;2.39e-08;3!CL:0000067;2.39e-08;3!CL:0005012;2.39e-08;3!CL:0002304;2.39e-08;3!CL:0000243;1.16e-07;15!CL:0000125;1.16e-07;15!CL:0000174;7.01e-07;3!CL:0002319;8.17e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.27e-14,253;CL:0002322,5.09e-11,5;CL:0000128,8.23e-09,7;CL:0000126,8.23e-09,7;CL:0000127,8.23e-09,7;CL:0002453,8.23e-09,7;CL:0000095,1.35e-08,17;CL:0000123,1.35e-08,17;CL:0002605,2.01e-08,3;CL:0000064,2.32e-08,3;CL:0000067,2.32e-08,3;CL:0005012,2.32e-08,3;CL:0002304,2.32e-08,3;CL:0000243,9.02e-08,15;CL:0000125,9.02e-08,15;CL:0000030,9.02e-08,15;CL:0000339,9.02e-08,15;CL:0000174,4.35e-07,3;CL:0002319,6.83e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.85e-08;29!CL:0000339;1.16e-07;15 | |||
|ontology_enrichment_disease=DOID:162!1.03e-36!235;DOID:14566!5.28e-35!239;DOID:0050687!9.67e-29!143;DOID:305!4.22e-23!106;DOID:0050686!1.71e-12!137;DOID:1749!6.08e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.72e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.82e-19,235;DOID:14566,3.01e-18,239;DOID:305,1.14e-17,106;DOID:0050687,2.82e-17,143;DOID:0050686,1.27e-07,137;DOID:1036,3.63e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.73e-09!9 | |ontology_enrichment_uberon=UBERON:0001737!5.73e-09!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.49e-17;9!UBERON:0001557;2.49e-17;9!UBERON:0000488;4.53e-10;4!UBERON:0001778;2.39e-08;3!UBERON:0001775;2.39e-08;3!UBERON:0002369;2.97e-07;3!UBERON:0001235;2.97e-07;3!UBERON:0006858;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.22e-18,9;UBERON:0000488,5.04e-10,4;UBERON:0001778,2.32e-08,3;UBERON:0001775,2.32e-08,3;UBERON:0001557,1.44e-07,19;UBERON:0002369,2.57e-07,3;UBERON:0001235,2.57e-07,3;UBERON:0006858,2.57e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,1.47745269692145,0.612002073732759,0,9.73202356245593,11.4974517061223,14.0607756346179,0,0,0.0787107813136792,0,0,0.309632246632152,0,0,0,0.232401601740905,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5834759925166,6.87361132133948,7.81729592668822,0.392937226493138,0.364295288292542,0.370784442784429,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0.193260853163297,0,0.286804595389004,1.95157929807353,1.19276791489337,1.2781333715647,1.86589899027667,2.52320850875628,0.36497735907583,0,0,0,0,0,1.77460200059766,1.18009283054671,1.20505514941741,1.98529150918309,1.96091499683166,1.18635309555548,1.34831308160164,1.56977172100277,1.53898862778556,0,0,0,0,0,0,0,0,0.368965315629341,1.20097467208968,3.73150970389327,1.1240175325762,0,0.277765335475589,0,0,0,20.0559600606883,0.70445216541493,0,0,0,79.0204397959275,105.593797937669,0,0,0,0,0.503946384596579,0.283550194484773,1.07470227243418,4.65014301622339,18.0189859207649,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,1.08524321078289,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,1.20859449591622,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0.671624264166535,0,0,0,0.328014645699706,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,0.405820753925408,0,0.563391205064483,0,0.196498082026242,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,46.2548227981959,268.531879618477,0.490080431962063,0.185803175125719,0.721346064882224,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0.343505344755765,0,0,0,0,0.835218521685727,0,0.270455678475983,0,0,0,0,4.00489721773394,0,0.568272293612826,0.95497793895076,0.593929361665277,1.53580351049616,0,0,0.333926115068718,0,0.211125408127993,0,0,0.251932747854276,45.2027576659524,2.21552649829925,0,2.87578723671446,0,0,0,0,0,0,0.0927680981618513,0,51.5646966948762,0.0874599999961957,0,2.38966241399549,0,0,11.3765313169683,0,0,0,0,0,0,0,0,0.871507708151921,0.139423744278603,0.461701551022782,0,0,0.179515288819544,0.217294743844016,0.638002319463839,0,0,0,0,0.332423363800313,1.80476528493745,1.17637520590644,2.18168063068596,73.0551870988113,0.953619473882272,0,0.489698424477443,9.75336192894192,0,0,0,0,0.593042257361244,0,0,0,0,0,0,31.1106744102023,0,0,0,0,0.063186579628488,1.50323419414493,0.103688191397247,0,0,0,0,0,1.10939738410511,0,0.685946781900644,1.74118413160805,0.17472666824203,0.171986032471617,0.483781656445426,0.219267951258557,0.328461828212837,0,0,0,1.09633539717401,1.19228767021794,0,0,0.801588202515337,0,0,0.288180834308212,0.229073192331831,0.171594997861965,1.29649318189335,0.124252535565433,1.17847017308398,1.35904206073614,0.836822770498666,0.611989305817931,0.577901179803038,0,0,0,1.71906176567983,0.262887354279314,0,0,0,0,0,0,0.134366944973453,0,2.32991899054908,0,0,0,0,2.79421995817089,0,0,6.43012593860077,0.687697182986169,0.83088067605837,0,0,0,0.335434687599266,0.157611414598396,0,0,0,4.79787993298613,0,0,0,0,0,0,0,7.55251190893918,0.511164065356265,1.13312091520126,0,0,0,0.39669780522807,0,0,0,0,0,0,0.197611631897944,0.487170393523584,13.4051664131738,0,0,0,0,1.25643277000187,0,0,0,0,0.554645257684261,0.0620964029413835,1.798532254171,5.24917713440848,30.4814726258712,0.285465333544967,0.235265819698172,2.34167452903441,0.724605143054126,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0.53168342911599,0,0.150257608997218,0.761610424337591,1.62748293281865,0,0.107410557042488,0,0,0,0,0,0,1.15571898244382,1.92997432237433,0.782982875895635,1.36023555307363,2.08370226891451,0,0.358177682162975,0,0,0.353378291891762,0.578742114812744,1.01365464391844,0.256241518587947,4.14516410077438,0,0,0,0,0,0.655219697692825,1.2288645437686,0,0,0.106691729694141,0.172214979660816,2.27006381426734,0,0.139879507719444,0,0.895260599125562,0,0.471797825567689,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,2.47736419030255,0.183428598521679,0.346576998451015,0,0,0,0,0.80682027481408,0,0.261906694481422,1.80149109261106,0,0.270150338473579,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0.455324382702595,0.0887023701626388,0.691403925334676,0.171488009437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| ||
|short_description=p1@LINC00052 | |short_description=p1@LINC00052 | ||
}} | }} |
Latest revision as of 15:00, 19 September 2015
Short description: | p1@LINC00052 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00052_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 0bp_to_ENST00000560153, NR_026869, uc002bmc.1_5end |
EntrezGene: | LINC00052 |
HGNC: | 26455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.27e-14 | 253 |
embryonic stem cell | 5.09e-11 | 5 |
oligodendrocyte | 8.23e-09 | 7 |
macroglial cell | 8.23e-09 | 7 |
astrocyte | 8.23e-09 | 7 |
oligodendrocyte precursor cell | 8.23e-09 | 7 |
neuron associated cell | 1.35e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 1.35e-08 | 17 |
astrocyte of the cerebral cortex | 2.01e-08 | 3 |
ciliated cell | 2.32e-08 | 3 |
ciliated epithelial cell | 2.32e-08 | 3 |
multi-ciliated epithelial cell | 2.32e-08 | 3 |
non-pigmented ciliary epithelial cell | 2.32e-08 | 3 |
glial cell (sensu Vertebrata) | 9.02e-08 | 15 |
glial cell | 9.02e-08 | 15 |
glioblast | 9.02e-08 | 15 |
glioblast (sensu Vertebrata) | 9.02e-08 | 15 |
steroid hormone secreting cell | 4.35e-07 | 3 |
neural cell | 6.83e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.22e-18 | 9 |
atypical epithelium | 5.04e-10 | 4 |
ciliary epithelium | 2.32e-08 | 3 |
ciliary body | 2.32e-08 | 3 |
upper respiratory tract | 1.44e-07 | 19 |
adrenal gland | 2.57e-07 | 3 |
adrenal cortex | 2.57e-07 | 3 |
adrenal/interrenal gland | 2.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.82e-19 | 235 |
disease of cellular proliferation | 3.01e-18 | 239 |
carcinoma | 1.14e-17 | 106 |
cell type cancer | 2.82e-17 | 143 |
organ system cancer | 1.27e-07 | 137 |
chronic leukemia | 3.63e-07 | 8 |