FFCP PHASE1:Hg19::chr11:61062762..61062809,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:61062762..61062809,-
|short_description=p1@VWCE
|description=CAGE_peak_1_at_VWCE_5end
|association_with_transcript=0bp_to_NM_152718,uc001nra.2,uc001nrb.2_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=220001 | |EntrezGene=220001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26487 | |HGNC=26487 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DN2 | |UniProt=Q96DN2 | ||
|association_with_transcript=0bp_to_NM_152718,uc001nra.2,uc001nrb.2_5end | |||
|cluster_id=chr11:61062762..61062809,- | |||
|description=CAGE_peak_1_at_VWCE_5end | |||
|id=chr11:61062762..61062809,- | |||
|ontology_enrichment_celltype=CL:0000115!1.13e-13!35;CL:0002139!1.82e-12!24;CL:0002078!3.98e-12!44;CL:0000222!7.83e-09!119;CL:0000071!1.73e-08!18;CL:0002546!1.73e-08!18;CL:0002321!6.39e-08!248;CL:0000220!2.27e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.74e-16;36!CL:0002139;3.20e-16;24!CL:0002078;5.84e-11;45!CL:0000071;1.93e-09;18!CL:0002138;2.26e-09;6!CL:0000182;3.27e-08;12!CL:0002322;1.52e-07;5!CL:0000213;4.18e-07;58!CL:0000215;4.18e-07;58!CL:0002543;5.54e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.23e-19,36;CL:0002078,1.79e-16,45;CL:0002139,1.96e-16,24;CL:0000213,7.61e-11,58;CL:0000215,7.61e-11,58;CL:0000222,8.18e-10,121;CL:0000071,1.14e-09,18;CL:0002546,1.14e-09,18;CL:0002321,1.56e-09,250;CL:0005020,2.72e-09,6;CL:0002138,2.72e-09,6;CL:0005022,2.72e-09,6;CL:0000182,2.92e-08,12;CL:0002322,1.40e-07,5;CL:0002543,3.92e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.93e-09;18!CL:0005022;2.26e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.20e-11!118;UBERON:0000483!5.48e-10!309;UBERON:0005256!1.56e-09!143;UBERON:0000119!1.88e-09!312;UBERON:0004872!6.54e-09!84;UBERON:0001986!1.73e-08!18;UBERON:0004638!1.73e-08!18;UBERON:0004852!1.73e-08!18;UBERON:0000490!1.86e-08!138;UBERON:0004111!1.91e-07!241;UBERON:0000055!6.13e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.93e-09;18!UBERON:0001986;1.93e-09;18!UBERON:0004852;1.93e-09;18!UBERON:0006914;1.78e-08;25!UBERON:0000487;4.07e-07;22!UBERON:0002107;4.26e-07;19!UBERON:0006925;4.26e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.14e-09,18;UBERON:0001986,1.14e-09,18;UBERON:0004852,1.14e-09,18;UBERON:0000490,4.70e-09,148;UBERON:0006914,1.15e-08,25;UBERON:0003914,3.16e-08,117;UBERON:0000487,2.71e-07,22;UBERON:0002107,3.98e-07,19;UBERON:0006925,3.98e-07,19;UBERON:0008836,3.98e-07,19;UBERON:0000055,4.36e-07,68 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,6.52964070499596,0,0.697801167972428,0,0,0.618831764800233,0.662794751455832,0,0,0,0.487932798790507,0,0.612002073732759,0,0,0,0,0.916960868975415,1.14940825229924,0.472264687882075,0,0.383829398097213,0,0,0.30120591877825,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84368859342554,0,0,0,0.668745981562712,0,0,0,0.111410456885174,0,0,0,1.15282187753108,1.30059347559878,0,0,0,0,0,0,0.339928028092699,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,4.87613732627923,4.69490601792545,0.895037932904712,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0,0,0,0.982343066232845,0.728590576585084,0,0.97364218096405,1.0447784237956,2.52620124985844,0,0,0,1.39133685156694,0,0.694281003215189,0.56530794192401,2.93649605346934,5.22724279686128,1.46296476575767,5.42675194255591,6.40379272836078,3.01248551488203,6.8480983908555,0.760272105718513,11.9590408198603,0.735326160691737,2.43042584364528,2.67899184852239,1.34717623575702,1.12611480483322,3.06633274931766,1.89853131913626,2.74802615895611,1.31780417436063,0,0.436094052142534,0.496971951695318,0,1.98613771219828,3.72887606973458,0.354668382198357,0.560677600142307,0,0,3.11211035399766,1.0776853765575,2.45192854670188,0.151357427644931,0,0.468642863667593,0.936480230490962,0,0.298897361103602,0.704606991862589,0.485618833104395,1.12360645361799,0.204154171254893,0.491337269247072,0.929932030581889,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,1.35214253015937,0.794025282120147,0.179389635688862,0.640672166455702,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.504867548488229,0.368199594569197,1.13152239773168,0,0.201504196455281,0.339121184620975,0.386521706326594,0.272746120590835,0,4.75697453905422,3.04818467139416,4.53156377191122,3.93912009058408,3.5324919122588,0.72995471815166,1.56449532329816,2.57296375277154,0,0.464367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,2.95262181849859,2.80483547606892,0.4115740113314,0,2.53510069643662,6.87979051674338,1.18157981336281,0.882926198829301,8.97815601364729,0.171567810298526,0,0,0.301586917234893,0.277765335475589,2.6064664424826,1.03993478527958,0,0.115930404975077,0.234817388471643,7.36268883581476,7.87075371380238,3.23432058798817,0,0,0.246217006087397,1.17002132569619,1.0404181360211,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0.864719720501769,0.25248486685276,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0,0,0,0,0.258543431515556,14.3062578340753,0,0,0,0,0,0.266422179016099,0.428933980974443,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,1.02738161275192,1.43248770591916,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0.434418072340414,1.76221041716467,0.686286847621712,0,0,0.106727557803444,0.303127571446259,0,1.5119514666484,0.248107807818777,0,0,0.128139149255701,0,0.321707842287215,0,0.308419387605311,1.42049380250502,0.739144404124282,1.55776328755086,0.929683027679674,4.95523743325651,0.200506470303285,0.0920809889358963,0.459257792658427,0.546273504020151,1.04899531967539,0.902399225814824,0.924184045252977,3.13739907670742,0,0.316654886678627,4.54933536283586,1.02056223165909,1.29549549661284,10.7959076883203,0.270946437543853,0.501689773854853,0,0.831076008928724,0.223874754722178,0.657779629937804,0.522870902049801,0.769350375349168,0.656029291399411,0,4.43076350085206,0,0,0.574265537996172,0,0,2.22342652071881,1.3864375540318,0.614014698904518,0.551346289938122,1.6113036730241,1.0151168573996,1.10794615640931,0.267096106940212,0.165284915360978,0.576570202095319,1.27612712494584,0.50578890427775,0,0.31481234683064,0,1.23213432070436,0.532306030317022,0,0.37064843820784,0,0,0.316379424718726,0.38126038784765,3.58256907835867,1.71175595213568,0.318203247925937,0,1.07923474549989,2.47083326762449,0.706874414074119,0,0,0,2.43816869544795,0.731140468893853,0,0.136499911407986,0.848432591722276,0,0,2.65375590096488,2.19225442626881,3.47265320560013,0.655894752046633,0.405820753925408,0.30982349809975,0,0.430234056612155,0.294747123039363,0.35667105148125,0,4.43326034125095,6.91519275215794,2.65631221636001,0.699869440489966,0.384888450902048,0,0,5.17790904272285,0.86101074534246,0,0,0,0,0,0,0.238231775457789,0,0,0,0,3.95249063171651,0,0,1.67222857613147,5.33796088012846,0,1.27541018183058,0.399158742865633,0,0,5.19395104439289,0,0,0,0,4.40158622284169,0,2.21979677910152,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0.121360521749513,0,0,1.43246690842614,0,0,0,0.281338832821026,0,0,3.3780065300479,0.597743964753209,0.276283915531148,3.02319297425131,0,0.492339221844278,0,0.0898683511473268,0,0,0.197286811273867,0,0,1.93866549219044,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,2.43074992906609,0,0.3617893158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| ||
|short_description=p1@VWCE | |||
}} | }} |
Latest revision as of 15:23, 18 September 2015
Short description: | p1@VWCE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VWCE_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_152718, uc001nra.2, uc001nrb.2_5end |
EntrezGene: | VWCE |
HGNC: | 26487 |
UniProt: | Q96DN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.23e-19 | 36 |
meso-epithelial cell | 1.79e-16 | 45 |
endothelial cell of vascular tree | 1.96e-16 | 24 |
lining cell | 7.61e-11 | 58 |
barrier cell | 7.61e-11 | 58 |
mesodermal cell | 8.18e-10 | 121 |
blood vessel endothelial cell | 1.14e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.14e-09 | 18 |
embryonic cell | 1.56e-09 | 250 |
lymphangioblast | 2.72e-09 | 6 |
endothelial cell of lymphatic vessel | 2.72e-09 | 6 |
vascular lymphangioblast | 2.72e-09 | 6 |
hepatocyte | 2.92e-08 | 12 |
embryonic stem cell | 1.40e-07 | 5 |
vein endothelial cell | 3.92e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.14e-09 | 18 |
endothelium | 1.14e-09 | 18 |
cardiovascular system endothelium | 1.14e-09 | 18 |
unilaminar epithelium | 4.70e-09 | 148 |
squamous epithelium | 1.15e-08 | 25 |
epithelial tube | 3.16e-08 | 117 |
simple squamous epithelium | 2.71e-07 | 22 |
liver | 3.98e-07 | 19 |
digestive gland | 3.98e-07 | 19 |
liver bud | 3.98e-07 | 19 |
vessel | 4.36e-07 | 68 |