FFCP PHASE1:Hg19::chr15:96829121..96829123,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:96829121..96829123,- | |||
|description=CAGE_peak_at_chr15:96829121..96829123,- | |description=CAGE_peak_at_chr15:96829121..96829123,- | ||
|id=chr15:96829121..96829123,- | |id=chr15:96829121..96829123,- | ||
|ontology_enrichment_celltype=CL:0002057!3.86e-11!42;CL:0000003!1.01e-10!722;CL:0002032!1.39e-09!165;CL:0000837!1.39e-09!165;CL:0000860!2.61e-09!45;CL:0000763!8.22e-09!112;CL:0000049!8.22e-09!112;CL:0000548!1.07e-08!679;CL:0000004!1.07e-08!679;CL:0000255!1.07e-08!679;CL:0000012!1.17e-08!682;CL:0000037!1.99e-08!172;CL:0000566!1.99e-08!172;CL:0000144!1.66e-07!625;CL:0002031!3.25e-07!124;CL:0000988!3.86e-07!182 | |ontology_enrichment_celltype=CL:0002057!3.86e-11!42;CL:0000003!1.01e-10!722;CL:0002032!1.39e-09!165;CL:0000837!1.39e-09!165;CL:0000860!2.61e-09!45;CL:0000763!8.22e-09!112;CL:0000049!8.22e-09!112;CL:0000548!1.07e-08!679;CL:0000004!1.07e-08!679;CL:0000255!1.07e-08!679;CL:0000012!1.17e-08!682;CL:0000037!1.99e-08!172;CL:0000566!1.99e-08!172;CL:0000144!1.66e-07!625;CL:0002031!3.25e-07!124;CL:0000988!3.86e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.18e-11;33!CL:0002057;3.18e-11;33!CL:0002561;5.82e-08;2!CL:0000576;8.59e-08;48!CL:0000473;1.95e-07;39!CL:0000234;1.95e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.59e-15,42;CL:0002057,3.59e-15,42;CL:0000473,8.12e-13,48;CL:0000234,8.12e-13,48;CL:0002009,1.47e-10,61;CL:0002194,1.53e-09,59;CL:0000576,1.53e-09,59;CL:0000040,1.53e-09,59;CL:0000559,1.53e-09,59;CL:0000557,2.70e-09,67;CL:0000763,7.86e-09,108;CL:0000049,7.86e-09,108;CL:0000766,2.55e-08,72;CL:0000839,3.47e-08,66;CL:0000037,4.60e-08,168;CL:0002561,6.42e-08,2;CL:0002032,7.87e-08,161;CL:0000837,7.87e-08,161;CL:0000738,1.69e-07,136;CL:0000988,2.41e-07,177;CL:0002031,2.62e-07,120;CL:0002087,6.53e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.67e-10;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005933;5.82e-08;2!UBERON:0005942;5.82e-08;2!UBERON:0005932;5.82e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.86e-09,76;UBERON:0001474,5.00e-08,82;UBERON:0004765,5.26e-08,90;UBERON:0005933,6.42e-08,2;UBERON:0005942,6.42e-08,2;UBERON:0005932,6.42e-08,2;UBERON:0001434,8.22e-07,100 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,1.34088328328186,0,0,0.631719873426831,0.522371256399677,0.491467873003018,0,0.218441372130172,0.263766978228454,0.37129905888014,0.662794751455832,0.672325146451775,2.41077811209591,1.46062018077475,1.46379839637152,0,0.204000691244253,0,0.286235987131057,0,0.376627918784408,0.229240217243854,0.246301768349837,0.0787107813136792,0,1.15148819429164,0.464448369948228,0,0,0.369754010166788,0.154934401160603,0.142169232487422,1.76160263600908,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0.145398238779565,1.13362783106643,0.727752183563449,0.232429036905685,0.822335776043652,2.16794459626573,0.575384784644301,0.256160706529101,0.709446689665756,0,1.93645405075148,0,0.376484679085209,1.36453075028923,2.02251136000576,0.306083892370903,1.28371610830437,3.19668562899521,0.329851300186716,0.797854630486527,0.426224750532694,0.580418477257168,0,2.4912889959823,0.251248665256743,1.5644487552606,3.9093992046921,0,1.47311054395026,3.16462387440884,0.845021145247767,1.91343869968539,1.46761051855863,0.44931452458598,0.600707571366025,0.48217676009124,0.570025487482497,2.58591680358817,0.91332076882317,1.75996244461323,0,1.77901850772711,1.28019066769952,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0.790152254325231,0.196709770113833,0,0.205601498999509,2.00623794468814,0.977766799900771,0.473447805734733,0,0.779873198196215,0.294605907474837,0.664601683750863,1.08321545506006,0.640456598628376,0.520237390239513,0.328875809207352,0.552700035571697,1.15921234294021,0.889719378972363,1.87278579662799,1.04535523804977,0.226618685395132,0.766440987203842,1.37450978193052,4.80737414837055,0,0.651083453856419,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0.670700859703636,0.639312809217652,0.722878304769133,1.00267582127178,0.434539556882471,0,0.486634870302636,0.0945348171640679,0.886917589850256,0.351339142772504,0.0654895377488563,0.364295288292542,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0.860234595106124,0.694281003215189,0,0.419499436209906,0.275118041940067,0.417989933073621,0.258416759169329,0.35576626268671,0.33472061276467,0,1.52054421143703,0.732186172644509,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,1.1409436430889,0.149448680551801,0.117434498643765,0.161872944368132,0,0.408308342509787,0.737005903870608,0.516628905878827,0,0,0,0,0.336672227908132,0.500474079487857,0,0,0,0.300476117813194,0.340296549480063,0,1.06778694409284,1.05965950579781,0.600182192168805,0.103052529238439,0,0.930584281657949,0.506328996723799,0.68205903612839,0.252433774244115,0,1.45481451136931,0,0,0.508681776931463,0.193260853163297,0.272746120590835,0,0.243947412259191,0,0.116193942869518,0.518305275076852,1.26160425437814,0.72995471815166,0,0,0,1.39310378409594,2.16563844500876,0,0.168584690078102,0.241011029883482,0.110293972732394,0.435758888184812,0.474541238222193,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.686271241194102,0,0,0.100528972411631,0.277765335475589,0,0,0,0.811512834825538,0.234817388471643,0.144366447761074,0.462985512576611,0.570762456703795,0.790204397959275,0,0,0,0.148631162288728,0,0.839910640994298,1.70130116690864,0.0895585227028483,0.290633938513962,0,0,0.528290604079356,0.207328115540772,0.144119953416961,0.12624243342638,0.190493682876507,0,0,0,0.411309970813294,0,1.14330573052231,0,0.87192013766656,0.1466765716419,0.387815147273333,0,0,1.59562869950922,0,0.514414748524284,0,0.266422179016099,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0.499864955910285,0,0,0,0.958499421966331,0,0,0,0.410952645100767,0,0.224170287987055,0.591092280605782,0.215627574859517,0.128343036279748,0,0,1.54657762555539,0.335032530668698,1.27587750330633,0,0,0,0.49076596687656,0,0.813795071099207,0.623912584592421,0.178428988797162,0.946214490203608,0.819989904948992,0.601892199455438,0,0,0.664225598535437,0,0.347534457872331,0,0,0,0,0,0.303127571446259,1.66435439510497,0,0.496215615637554,0.153461973288062,0.561320188866147,0.128139149255701,0,0,0,0,0.887808626565635,0.164254312027618,0,0.232420756919918,0.120859449591622,0.200506470303285,0.736647911487171,0.229628896329213,0,0.131124414959424,0.451199612907412,0,0,0,0.422206515571503,0,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0.656029291399411,0,0.309123034943167,0.183138929636687,0.165018999841176,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0.322260734604821,0.290033387828457,0,0.0890320356467374,0.165284915360978,0.576570202095319,0.382838137483752,0.10115778085555,2.32422774648643,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0.571890581771475,0,0.42793898803392,0,0,0,0.823611089208164,0,0.404364963146632,0,0,0.48763373908959,0,0,0.136499911407986,0.565621727814851,0,0,0,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| ||
|short_description=p@chr15:96829121..96829123,- | |short_description=p@chr15:96829121..96829123,- | ||
}} | }} |
Latest revision as of 05:52, 25 July 2015
Short description: | p@chr15:96829121..96829123, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:96829121..96829123, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.59e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.59e-15 | 42 |
defensive cell | 8.12e-13 | 48 |
phagocyte | 8.12e-13 | 48 |
macrophage dendritic cell progenitor | 1.47e-10 | 61 |
monopoietic cell | 1.53e-09 | 59 |
monocyte | 1.53e-09 | 59 |
monoblast | 1.53e-09 | 59 |
promonocyte | 1.53e-09 | 59 |
granulocyte monocyte progenitor cell | 2.70e-09 | 67 |
myeloid cell | 7.86e-09 | 108 |
common myeloid progenitor | 7.86e-09 | 108 |
myeloid leukocyte | 2.55e-08 | 72 |
myeloid lineage restricted progenitor cell | 3.47e-08 | 66 |
hematopoietic stem cell | 4.60e-08 | 168 |
outer root sheath cell | 6.42e-08 | 2 |
hematopoietic oligopotent progenitor cell | 7.87e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.87e-08 | 161 |
leukocyte | 1.69e-07 | 136 |
hematopoietic cell | 2.41e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 2.62e-07 | 120 |
nongranular leukocyte | 6.53e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.86e-09 | 76 |
bone element | 5.00e-08 | 82 |
skeletal element | 5.26e-08 | 90 |
hair root sheath | 6.42e-08 | 2 |
hair outer root sheath | 6.42e-08 | 2 |
bulb of hair follicle | 6.42e-08 | 2 |
skeletal system | 8.22e-07 | 100 |