FFCP PHASE1:Hg19::chr16:55522512..55522527,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4313 | |EntrezGene=4313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7166 | |HGNC=7166 | ||
|TSSclassifier=strong | |||
|UniProt=Q2EF79 | |UniProt=Q2EF79 | ||
|association_with_transcript=0bp_to_DQ385623_5end | |association_with_transcript=0bp_to_DQ385623_5end | ||
|cluster_id=chr16:55522512..55522527,+ | |||
|coexpression_cluster_id=C351 | |||
|description=CAGE_peak_6_at_MMP2_5end | |description=CAGE_peak_6_at_MMP2_5end | ||
|id=chr16:55522512..55522527,+ | |id=chr16:55522512..55522527,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.16e-30!180;CL:0000057!3.70e-17!75;CL:0000680!6.55e-15!57;CL:0000056!6.55e-15!57;CL:0000355!6.55e-15!57;CL:0000187!2.29e-14!54;CL:0000183!9.27e-14!59;CL:0000192!9.91e-14!42;CL:0000514!9.91e-14!42;CL:0000393!3.01e-12!60;CL:0000211!3.01e-12!60;CL:0000359!2.75e-10!32;CL:0000048!1.25e-08!430;CL:0002334!1.30e-08!12;CL:0000723!5.96e-08!436;CL:0000034!4.21e-07!444;CL:0000222!4.48e-07!119;CL:0002371!7.98e-07!591;CL:0000499!9.00e-07!27 | |ontology_enrichment_celltype=CL:0000055!3.16e-30!180;CL:0000057!3.70e-17!75;CL:0000680!6.55e-15!57;CL:0000056!6.55e-15!57;CL:0000355!6.55e-15!57;CL:0000187!2.29e-14!54;CL:0000183!9.27e-14!59;CL:0000192!9.91e-14!42;CL:0000514!9.91e-14!42;CL:0000393!3.01e-12!60;CL:0000211!3.01e-12!60;CL:0000359!2.75e-10!32;CL:0000048!1.25e-08!430;CL:0002334!1.30e-08!12;CL:0000723!5.96e-08!436;CL:0000034!4.21e-07!444;CL:0000222!4.48e-07!119;CL:0002371!7.98e-07!591;CL:0000499!9.00e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.08e-13;12!CL:0000359;4.60e-08;32!CL:0000134;1.32e-07;55!CL:0000569;2.96e-07;4!CL:0000135;4.25e-07;3!CL:0000388;4.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.57e-17,76;CL:0000048,3.77e-15,427;CL:0000723,1.33e-14,433;CL:0002334,4.25e-14,12;CL:0000034,6.70e-14,441;CL:0002320,1.48e-10,361;CL:0000134,3.67e-10,354;CL:0000359,2.79e-08,32;CL:0000192,3.52e-08,43;CL:0000514,3.52e-08,43;CL:0000219,1.11e-07,386;CL:0000569,1.79e-07,4;CL:0000011,1.79e-07,4;CL:0000135,4.52e-07,3;CL:0000388,4.52e-07,3;CL:0000499,7.63e-07,28;CL:0002539,7.94e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000011;2.96e-07;4 | |||
|ontology_enrichment_disease=DOID:2394!7.77e-09!14 | |ontology_enrichment_disease=DOID:2394!7.77e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.18e-09;14!DOID:17;7.13e-08;5!DOID:450;7.13e-08;5!DOID:66;7.13e-08;5!DOID:423;7.13e-08;5!DOID:0080000;7.13e-08;5!DOID:11722;7.13e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.17e-09,14;DOID:17,1.19e-07,5;DOID:450,1.19e-07,5;DOID:66,1.19e-07,5;DOID:423,1.19e-07,5;DOID:0080000,1.19e-07,5;DOID:11722,1.19e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!5.54e-15!63;UBERON:0001015!5.54e-15!63;UBERON:0000383!5.54e-15!63;UBERON:0001134!1.26e-14!61;UBERON:0002036!1.26e-14!61;UBERON:0003082!1.26e-14!61;UBERON:0000914!2.42e-13!83;UBERON:0002329!2.42e-13!83;UBERON:0003077!2.42e-13!83;UBERON:0003059!2.42e-13!83;UBERON:0007282!2.42e-13!83;UBERON:0009618!2.42e-13!83;UBERON:0007285!2.42e-13!83;UBERON:0004290!3.56e-13!70;UBERON:0000486!7.19e-12!82;UBERON:0001637!5.18e-11!42;UBERON:0003509!5.18e-11!42;UBERON:0004572!5.18e-11!42;UBERON:0004872!1.93e-10!84;UBERON:0001981!3.64e-10!60;UBERON:0007500!3.64e-10!60;UBERON:0004537!3.64e-10!60;UBERON:0006965!3.64e-10!60;UBERON:0004573!1.44e-09!33;UBERON:0004571!1.44e-09!33;UBERON:0002049!2.73e-09!79;UBERON:0007798!2.73e-09!79;UBERON:0000055!8.19e-09!69;UBERON:0000490!1.25e-08!138;UBERON:0005256!5.67e-08!143;UBERON:0004535!7.75e-08!110;UBERON:0001009!1.22e-07!113;UBERON:0003102!5.81e-07!95;UBERON:0001135!7.91e-07!15 | |ontology_enrichment_uberon=UBERON:0002385!5.54e-15!63;UBERON:0001015!5.54e-15!63;UBERON:0000383!5.54e-15!63;UBERON:0001134!1.26e-14!61;UBERON:0002036!1.26e-14!61;UBERON:0003082!1.26e-14!61;UBERON:0000914!2.42e-13!83;UBERON:0002329!2.42e-13!83;UBERON:0003077!2.42e-13!83;UBERON:0003059!2.42e-13!83;UBERON:0007282!2.42e-13!83;UBERON:0009618!2.42e-13!83;UBERON:0007285!2.42e-13!83;UBERON:0004290!3.56e-13!70;UBERON:0000486!7.19e-12!82;UBERON:0001637!5.18e-11!42;UBERON:0003509!5.18e-11!42;UBERON:0004572!5.18e-11!42;UBERON:0004872!1.93e-10!84;UBERON:0001981!3.64e-10!60;UBERON:0007500!3.64e-10!60;UBERON:0004537!3.64e-10!60;UBERON:0006965!3.64e-10!60;UBERON:0004573!1.44e-09!33;UBERON:0004571!1.44e-09!33;UBERON:0002049!2.73e-09!79;UBERON:0007798!2.73e-09!79;UBERON:0000055!8.19e-09!69;UBERON:0000490!1.25e-08!138;UBERON:0005256!5.67e-08!143;UBERON:0004535!7.75e-08!110;UBERON:0001009!1.22e-07!113;UBERON:0003102!5.81e-07!95;UBERON:0001135!7.91e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.03e-11;33!UBERON:0004571;5.03e-11;33!UBERON:0004457;1.19e-09;9!UBERON:0000042;1.19e-09;9!UBERON:0003688;1.30e-07;6!UBERON:0002358;1.30e-07;6!UBERON:0003684;1.30e-07;6!UBERON:0001178;1.30e-07;6!UBERON:0001637;1.82e-07;42!UBERON:0003509;1.82e-07;42!UBERON:0004572;1.82e-07;42!UBERON:0007846;4.25e-07;3!UBERON:0000043;4.25e-07;3!UBERON:0007845;4.25e-07;3!UBERON:0000947;5.35e-07;21!UBERON:0010191;5.35e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,4.68e-12,33;UBERON:0004571,4.68e-12,33;UBERON:0002384,9.33e-10,371;UBERON:0001637,1.07e-09,42;UBERON:0003509,1.07e-09,42;UBERON:0004572,1.07e-09,42;UBERON:0003688,1.22e-07,6;UBERON:0002358,1.22e-07,6;UBERON:0003684,1.22e-07,6;UBERON:0001178,1.22e-07,6;UBERON:0003102,2.24e-07,99;UBERON:0000947,3.74e-07,21;UBERON:0010191,3.74e-07,21;UBERON:0007846,4.52e-07,3;UBERON:0000043,4.52e-07,3;UBERON:0007845,4.52e-07,3;UBERON:0004457,6.65e-07,12;UBERON:0000042,6.65e-07,12;UBERON:0004237,7.94e-07,10;UBERON:0004695,7.94e-07,10;UBERON:0002111,7.94e-07,10;UBERON:0004178,7.94e-07,10 | |||
|phase1_expression=2.36181893051724,7.70761886007539,0.704772020479856,1.0007329835313,6.70441641640932,0.872338524100369,0,1.26343974685366,1.56711376919903,0,0,0,0,0.123766352960047,0.331397375727916,5.3786011716142,3.61616716814386,5.11217063271161,4.87932798790507,0.369363174230364,0,0.313454721478088,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.0843174571537,0.50133791063589,0.869079113764942,1.5905718941022,2.91980922181582,0,0,0.43917392846563,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.417989933073621,0,0,0,0,0,0.976248230192678,0,1.62028389576352,0.267899184852239,0,0,0,0,0.366403487860815,0,0,0,0.993943903390637,1.13967460498122,0.397227542439656,10.0392817262085,1.41867352879343,0,0,1.2333377420858,0.622422070799533,0.404132016209064,0.163461903113459,0.756787138224657,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0.408308342509787,0.122834317311768,1.03325781175765,2.37600571456411,4.20353779773547,0,0.718618141816238,0,0.125118519871964,0.277064115484183,0,2.14541457059314,2.55404700141215,0.113432183160021,1.25572744982203,1.06778694409284,1.05965950579781,1.20036438433761,1.44273540933814,0.257640540045629,0.18611685633159,1.18143432568886,0.68205903612839,1.00973509697646,0.644349290496095,1.45481451136931,3.55009592516614,0.302256294682921,0.508681776931463,0,0,0,0,0,0,0,0,0,0,8.36213219650751,0,2.3218396401599,3.60939740834793,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,1.44331342025273,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0.571652865261156,0.112131084345361,0.43596006883328,0,1.16344544182,0,0,2.39344304926383,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,3.49309748335652,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,1.03985430765404,3.03329280955175,1.57702415033935,0.702848489956279,1.20378439891088,6.82222512167955,5.17365356462525,0.664225598535437,0,0.434418072340414,0.783204629850962,1.02943027143257,0,0,0,0,0,0,2.97729369382532,1.07423381301644,6.45518217196069,1.92208723883551,2.55853624533352,3.21707842287215,0,2.46735510084249,2.84098760501003,0.410635780069046,4.15403543346897,1.85936605535935,0,1.60405176242628,0.0920809889358963,0.918515585316854,1.27463817604702,1.70461739447251,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0.773365746336976,0.154048617114644,0.15350367472613,0.275673144969061,0.322260734604821,0.435050081742686,0.0852266274161009,0.178064071293475,0,0.192190067365106,0.127612712494584,0,1.85938219718914,5.35180989612088,0,0.308033580176089,0.532306030317022,0,1.29726953372744,0,0.372158369359667,0.949138274156178,0.190630193923825,0.511795582622668,0.42793898803392,0,0,0.179872457583315,1.64722217841633,0.824686816419805,0.404364963146632,3.17020642346017,1.68503382495592,0,1.70599442741899,8.45201174054043,0.409499734223957,2.82810863907426,2.26016233240486,0.551365343546124,1.32687795048244,2.19225442626881,1.15755106853338,0.655894752046633,0.202910376962704,0.92947049429925,0.563391205064483,0,0.294747123039363,0,0.709522128141196,3.16661452946496,6.25660296623814,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0.667852230137435,0,0,0.597743964753209,0.276283915531148,0,0.306806047506464,0,1.24415835064723,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,1.02547850262301,0,0.179515288819544,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0.611030144933625,0,0,0,0,0,0.468528891450678,0,0,0,0.789168805698781,1.20990716048664,0,0.379119477770928,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.04836000945218,0,0,0,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0,0,0,0.0801588202515337,0,0.39961921916426,0,0,0,0,0,0,0,0,0.713987523454252,0,0,0,0,0.859530882839914,0,0.837847203816763,0.458320848023367,0,0.399358000997982,0,0,0.201550417460179,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0.662091970365432,0,1.62899880526114,2.5926644736038,2.93928624098468,1.19730191562487,0,0.511164065356265,0.113312091520126,0,0,0,0,0,0,0,0.943225830597996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0,0.895528817321244,1.40227985908335,1.10961172300523,2.08343305802598,1.50940741051545,5.33886732957922,2.97492088916001,2.7221566277383,1.08806040407946,1.77426179987561,0.477890301491107,4.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| ||
|short_description=p6@MMP2 | |short_description=p6@MMP2 | ||
}} | }} |
Latest revision as of 00:02, 17 September 2015
Short description: | p6@MMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MMP2_5end |
Coexpression cluster: | C351_Fibroblast_Smooth_mesenchymal_Adipocyte_tenocyte_Synoviocyte_Hair |
Association with transcript: | 0bp_to_DQ385623_5end |
EntrezGene: | MMP2 |
HGNC: | 7166 |
UniProt: | Q2EF79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.57e-17 | 76 |
multi fate stem cell | 3.77e-15 | 427 |
somatic stem cell | 1.33e-14 | 433 |
preadipocyte | 4.25e-14 | 12 |
stem cell | 6.70e-14 | 441 |
connective tissue cell | 1.48e-10 | 361 |
mesenchymal cell | 3.67e-10 | 354 |
vascular associated smooth muscle cell | 2.79e-08 | 32 |
smooth muscle cell | 3.52e-08 | 43 |
smooth muscle myoblast | 3.52e-08 | 43 |
motile cell | 1.11e-07 | 386 |
cardiac mesenchymal cell | 1.79e-07 | 4 |
migratory trunk neural crest cell | 1.79e-07 | 4 |
fibrocyte | 4.52e-07 | 3 |
tendon cell | 4.52e-07 | 3 |
stromal cell | 7.63e-07 | 28 |
aortic smooth muscle cell | 7.94e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 4.68e-12 | 33 |
systemic arterial system | 4.68e-12 | 33 |
connective tissue | 9.33e-10 | 371 |
artery | 1.07e-09 | 42 |
arterial blood vessel | 1.07e-09 | 42 |
arterial system | 1.07e-09 | 42 |
omentum | 1.22e-07 | 6 |
peritoneum | 1.22e-07 | 6 |
abdominal cavity | 1.22e-07 | 6 |
visceral peritoneum | 1.22e-07 | 6 |
surface structure | 2.24e-07 | 99 |
aorta | 3.74e-07 | 21 |
aortic system | 3.74e-07 | 21 |
dense regular connective tissue | 4.52e-07 | 3 |
tendon | 4.52e-07 | 3 |
regular connective tissue | 4.52e-07 | 3 |
cavity lining | 6.65e-07 | 12 |
serous membrane | 6.65e-07 | 12 |
blood vessel smooth muscle | 7.94e-07 | 10 |
arterial system smooth muscle | 7.94e-07 | 10 |
artery smooth muscle tissue | 7.94e-07 | 10 |
aorta smooth muscle tissue | 7.94e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.17e-09 | 14 |
musculoskeletal system disease | 1.19e-07 | 5 |
myotonic disease | 1.19e-07 | 5 |
muscle tissue disease | 1.19e-07 | 5 |
myopathy | 1.19e-07 | 5 |
muscular disease | 1.19e-07 | 5 |
myotonic dystrophy | 1.19e-07 | 5 |