FFCP PHASE1:Hg19::chr20:34026051..34026075,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8200 | |EntrezGene=8200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4220 | |HGNC=4220 | ||
|TSSclassifier=strong | |||
|UniProt=P43026 | |UniProt=P43026 | ||
|association_with_transcript=-24bp_to_NM_000557,uc002xck.1_5end | |association_with_transcript=-24bp_to_NM_000557,uc002xck.1_5end | ||
|cluster_id=chr20:34026051..34026075,- | |||
|coexpression_cluster_id=C2614 | |||
|description=CAGE_peak_4_at_GDF5_5end | |description=CAGE_peak_4_at_GDF5_5end | ||
|id=chr20:34026051..34026075,- | |id=chr20:34026051..34026075,- | ||
|ontology_enrichment_celltype=CL:0000055!4.99e-28!180;CL:0000183!6.32e-20!59;CL:0000187!1.16e-17!54;CL:0000680!4.80e-17!57;CL:0000056!4.80e-17!57;CL:0000355!4.80e-17!57;CL:0000393!2.00e-15!60;CL:0000211!2.00e-15!60;CL:0000057!8.27e-13!75;CL:0000192!1.36e-10!42;CL:0000514!1.36e-10!42;CL:0000222!1.36e-09!119;CL:0002371!4.05e-08!591;CL:0000144!1.13e-07!625;CL:0000188!1.79e-07!9 | |ontology_enrichment_celltype=CL:0000055!4.99e-28!180;CL:0000183!6.32e-20!59;CL:0000187!1.16e-17!54;CL:0000680!4.80e-17!57;CL:0000056!4.80e-17!57;CL:0000355!4.80e-17!57;CL:0000393!2.00e-15!60;CL:0000211!2.00e-15!60;CL:0000057!8.27e-13!75;CL:0000192!1.36e-10!42;CL:0000514!1.36e-10!42;CL:0000222!1.36e-09!119;CL:0002371!4.05e-08!591;CL:0000144!1.13e-07!625;CL:0000188!1.79e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002540;8.81e-11;6!CL:0002564;2.79e-08;3!CL:0002623;1.41e-07;3!CL:0000499;1.44e-07;28!CL:0002622;1.70e-07;3!CL:0000064;2.38e-07;3!CL:0000067;2.38e-07;3!CL:0005012;2.38e-07;3!CL:0002304;2.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,6.82e-11,6;CL:0002564,2.85e-08,3;CL:0000499,1.64e-07,28;CL:0002623,2.27e-07,3;CL:0002622,2.32e-07,3;CL:0000064,6.13e-07,3;CL:0000067,6.13e-07,3;CL:0005012,6.13e-07,3;CL:0002304,6.13e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.54e-17!83;UBERON:0002329!5.54e-17!83;UBERON:0003077!5.54e-17!83;UBERON:0003059!5.54e-17!83;UBERON:0007282!5.54e-17!83;UBERON:0009618!5.54e-17!83;UBERON:0007285!5.54e-17!83;UBERON:0001134!5.77e-15!61;UBERON:0002036!5.77e-15!61;UBERON:0003082!5.77e-15!61;UBERON:0004290!1.70e-14!70;UBERON:0002385!4.90e-14!63;UBERON:0001015!4.90e-14!63;UBERON:0000383!4.90e-14!63;UBERON:0000475!1.74e-12!365;UBERON:0001444!2.96e-12!48;UBERON:0005256!6.64e-12!143;UBERON:0000481!1.03e-11!347;UBERON:0000486!4.55e-11!82;UBERON:0001801!2.48e-10!14;UBERON:0001456!5.38e-10!21;UBERON:0003102!1.93e-09!95;UBERON:0000019!1.35e-08!19;UBERON:0000047!1.35e-08!19;UBERON:0004088!1.35e-08!19;UBERON:0003072!1.35e-08!19;UBERON:0003071!1.35e-08!19;UBERON:0004128!1.35e-08!19;UBERON:0002200!5.01e-08!11;UBERON:0006876!5.01e-08!11;UBERON:0000970!6.40e-08!20;UBERON:0000119!1.69e-07!312;UBERON:0002104!2.59e-07!21;UBERON:0005085!4.06e-07!29;UBERON:0000483!5.89e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002203;1.26e-13;6!UBERON:0001768;1.26e-13;6!UBERON:0002200;1.26e-13;6!UBERON:0001456;4.28e-13;21!UBERON:0001044;6.09e-13;6!UBERON:0003293;6.09e-13;6!UBERON:0003294;6.09e-13;6!UBERON:0010047;6.09e-13;6!UBERON:0003408;6.09e-13;6!UBERON:0000167;6.09e-13;6!UBERON:0011135;7.69e-13;5!UBERON:0002216;7.69e-13;5!UBERON:0011134;7.69e-13;5!UBERON:0002209;7.69e-13;5!UBERON:0002213;7.69e-13;5!UBERON:0007844;7.69e-13;5!UBERON:0011138;7.69e-13;5!UBERON:0001130;7.69e-13;5!UBERON:0001066;7.69e-13;5!UBERON:0001468;7.69e-13;5!UBERON:0006876;4.34e-12;11!UBERON:0001801;5.03e-12;14!UBERON:0004905;9.86e-11;8!UBERON:0000982;9.86e-11;8!UBERON:0004770;9.86e-11;8!UBERON:0000019;2.79e-10;19!UBERON:0000047;2.79e-10;19!UBERON:0004088;2.79e-10;19!UBERON:0010230;2.79e-10;19!UBERON:0003891;6.40e-10;4!UBERON:0000970;1.17e-09;20!UBERON:0000488;1.80e-09;4!UBERON:0004765;2.21e-09;26!UBERON:0002104;4.25e-09;21!UBERON:0000075;2.72e-08;16!UBERON:0002242;2.79e-08;3!UBERON:0000020;4.00e-08;23!UBERON:0001032;1.06e-07;24!UBERON:0004456;1.06e-07;24!UBERON:0000033;1.56e-07;50!UBERON:0001434;1.94e-07;36!UBERON:0001778;2.38e-07;3!UBERON:0001775;2.38e-07;3!UBERON:0000153;2.45e-07;54!UBERON:0001444;2.96e-07;48!UBERON:0007625;6.10e-07;11!UBERON:0007811;9.28e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002203,4.40e-13,6;UBERON:0001768,4.40e-13,6;UBERON:0002200,4.40e-13,6;UBERON:0011135,8.61e-13,5;UBERON:0002216,8.61e-13,5;UBERON:0011134,8.61e-13,5;UBERON:0002209,8.61e-13,5;UBERON:0002213,8.61e-13,5;UBERON:0005856,8.61e-13,5;UBERON:0005866,8.61e-13,5;UBERON:0005863,8.61e-13,5;UBERON:0007844,8.61e-13,5;UBERON:0011138,8.61e-13,5;UBERON:0001130,8.61e-13,5;UBERON:0001066,8.61e-13,5;UBERON:0001468,8.61e-13,5;UBERON:0001044,1.64e-12,6;UBERON:0003293,1.64e-12,6;UBERON:0003294,1.64e-12,6;UBERON:0010047,1.64e-12,6;UBERON:0000167,1.64e-12,6;UBERON:0001456,5.24e-12,22;UBERON:0001801,1.09e-11,14;UBERON:0006876,1.37e-11,11;UBERON:0001444,2.16e-11,49;UBERON:0004905,9.17e-11,8;UBERON:0000982,9.17e-11,8;UBERON:0004770,9.17e-11,8;UBERON:0003891,4.68e-10,4;UBERON:0000033,2.19e-09,56;UBERON:0000019,2.20e-09,20;UBERON:0000047,2.20e-09,20;UBERON:0010312,2.20e-09,20;UBERON:0004088,2.20e-09,20;UBERON:0010230,2.20e-09,20;UBERON:0003072,2.20e-09,20;UBERON:0004128,2.20e-09,20;UBERON:0003071,2.20e-09,20;UBERON:0000488,4.64e-09,4;UBERON:0000970,7.74e-09,21;UBERON:0002104,7.74e-09,21;UBERON:0000075,2.34e-08,16;UBERON:0002242,2.85e-08,3;UBERON:0003068,2.85e-08,3;UBERON:0002328,2.85e-08,3;UBERON:0004880,2.85e-08,3;UBERON:0000153,4.81e-08,62;UBERON:0007811,4.81e-08,62;UBERON:0005085,6.33e-08,31;UBERON:0000020,1.77e-07,24;UBERON:0001032,1.77e-07,24;UBERON:0004456,1.77e-07,24;UBERON:0003408,3.15e-07,10;UBERON:0001778,6.13e-07,3;UBERON:0001775,6.13e-07,3;UBERON:0007625,9.82e-07,11 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,2.53299878168311,0.631719873426831,0,0.245733936501509,0,0,0,9.15871011904345,2.31978163009541,1.34465029290355,1.20538905604795,0.730310090387373,0.487932798790507,0.492484232307152,1.63200552995402,1.56727360739044,0.286235987131057,0.958120975510189,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.639312809217652,1.0843174571537,2.00535164254356,1.15877215168659,0,0,1.03988298880475,2.4390233720882,1.05401742831751,0,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,2.02608818663328,0.926864265692532,0.573673241497627,1.06400514659507,1.12135520028461,0,0.49333509683432,3.11211035399766,0,0,0.605429710579726,0,0.70296429550139,0.312160076830321,0,0,0,0,0.140450806702248,0.408308342509787,0.491337269247072,0.619954687054593,0,0.494533858557114,0,0.718618141816238,0.336672227908132,0.375355559615893,0,1.31693286264251,1.83892677479412,0.901428353439581,0.226864366320042,0,0.213557388818567,1.27159140695737,0.300091096084402,0.412210116953756,0.257640540045629,0.18611685633159,0.168776332241266,0,0.504867548488229,0.644349290496095,0,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0.36497735907583,0,0.643240938192885,1.38134921352481,0.464367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,0,0,0,0,0,0,2.40194934417936,0,0,0,0.277765335475589,1.3032332212413,3.11980435583874,2.88662684050547,0.695582429850461,0.939269553886573,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.129271715757778,0,0.845302752556,0,0,3.60090323966999,0,3.99633268524149,0.142977993658148,1.08524321078289,0.823240336780769,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,2.15662369942424,0,1.42636905040718,0,0.61642896765115,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,6.25726607767613,7.50255781589516,1.35632511849868,0,0.178428988797162,0,0.117141414992713,1.50473049863859,2.27407504055985,3.10419213877515,1.99267679560631,3.50301420229236,1.65078867489357,1.17480694477644,0.686286847621712,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0,0,0.616838775210622,0.177561725313127,1.14978018419333,0.519254429183621,0.116210378459959,0,0.200506470303285,0.184161977871793,1.37777337797528,3.09554985611419,1.18011973463482,0.451199612907412,0,3.92174884588428,0,0.211103257785751,0,0,0,0,1.89662506280697,7.5253466078228,0.509752546090077,0,0.447749509444357,0,0,0,0,1.30151357865721,0.103041011647722,0,0,0,0,0,2.90012154876366,0.462145851343933,0.307007349452259,0.275673144969061,2.36324538710202,1.88521702088497,0.767039646744908,0.890320356467374,0,0,0.127612712494584,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0.532306030317022,0,0,0,1.116475108079,0.632758849437452,1.33441135746677,3.58256907835867,0.42793898803392,0.636406495851874,0,0.539617372749944,0.54907405947211,0.235624804691373,0.202182481573316,1.58510321173008,0,0.48763373908959,0,0,0.409499734223957,0.141405431953713,0,0,1.32687795048244,0.876901770507525,5.20897980840019,1.9676842561399,0.608731130888112,0,0.281695602532241,0.430234056612155,0.88424136911809,0.35667105148125,0.354761064070598,1.47775344708365,0,1.13841952129715,5.94889024416471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,3.0957485844891,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,2.17199840701485,0.864221491201268,2.61269888087527,0,0,2.3854323049959,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0.655745261419609,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,1.10961172300523,4.73507513187723,4.0250864280412,2.66943366478961,0,1.96600200892211,0.15543720058278,0.295710299979268,0,0.449803112163605,0.310525913752519,0.829412415681711,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0.673498977531838,0,0,0,0,0,0.463044948647668,0,0.71635536432595,0,5.04353314031026,1.41351316756705,1.73622634443823,2.36519416914302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.4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| ||
|short_description=p4@GDF5 | |short_description=p4@GDF5 | ||
}} | }} |
Latest revision as of 20:08, 15 September 2015
Short description: | p4@GDF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GDF5_5end |
Coexpression cluster: | C2614_mesenchymal_leiomyoma_mesothelioma_Anulus_Nucleus_Smooth_epithelioid |
Association with transcript: | -24bp_to_NM_000557, uc002xck.1_5end |
EntrezGene: | GDF5 |
HGNC: | 4220 |
UniProt: | P43026 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 6.82e-11 | 6 |
nucleus pulposus cell of intervertebral disc | 2.85e-08 | 3 |
stromal cell | 1.64e-07 | 28 |
acinar cell of salivary gland | 2.27e-07 | 3 |
prostate stromal cell | 2.32e-07 | 3 |
ciliated cell | 6.13e-07 | 3 |
ciliated epithelial cell | 6.13e-07 | 3 |
multi-ciliated epithelial cell | 6.13e-07 | 3 |
non-pigmented ciliary epithelial cell | 6.13e-07 | 3 |