FFCP PHASE1:Hg19::chr16:85617044..85617059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:85617044..85617059,- | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr16:85617044..85617059,- | |description=CAGE_peak_at_chr16:85617044..85617059,- | ||
|id=chr16:85617044..85617059,- | |id=chr16:85617044..85617059,- | ||
|ontology_enrichment_celltype=CL:0000128!3.56e-15!7;CL:0000126!3.56e-15!7;CL:0000127!3.56e-15!7;CL:0002453!3.56e-15!7;CL:0002605!2.20e-13!3;CL:0000133!3.43e-12!59;CL:0000333!9.54e-12!41;CL:0000221!3.66e-11!71;CL:0002559!7.73e-11!4;CL:0000095!6.02e-10!17;CL:0000123!6.02e-10!17;CL:0000243!2.18e-08!15;CL:0000125!2.18e-08!15;CL:0000030!2.18e-08!15;CL:0000339!2.18e-08!15;CL:0000346!3.97e-07!3;CL:1000428!3.97e-07!3;CL:0000710!5.91e-07!20;CL:0002077!7.05e-07!33;CL:0000075!8.78e-07!27 | |ontology_enrichment_celltype=CL:0000128!3.56e-15!7;CL:0000126!3.56e-15!7;CL:0000127!3.56e-15!7;CL:0002453!3.56e-15!7;CL:0002605!2.20e-13!3;CL:0000133!3.43e-12!59;CL:0000333!9.54e-12!41;CL:0000221!3.66e-11!71;CL:0002559!7.73e-11!4;CL:0000095!6.02e-10!17;CL:0000123!6.02e-10!17;CL:0000243!2.18e-08!15;CL:0000125!2.18e-08!15;CL:0000030!2.18e-08!15;CL:0000339!2.18e-08!15;CL:0000346!3.97e-07!3;CL:1000428!3.97e-07!3;CL:0000710!5.91e-07!20;CL:0002077!7.05e-07!33;CL:0000075!8.78e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.91e-44;3!CL:1000428;1.91e-44;3!CL:0002559;3.55e-27;5!CL:0000306;1.22e-09;4!CL:0002222;1.22e-09;4!CL:0002224;1.22e-09;4!CL:0002569;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.22e-44,3;CL:1000428,1.22e-44,3;CL:0002559,2.72e-27,5;CL:0000306,1.22e-09,4;CL:0002222,1.22e-09,4;CL:0002224,1.22e-09,4;CL:0000333,1.11e-07,41;CL:0002569,8.97e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.04e-08!5;DOID:450!2.04e-08!5;DOID:66!2.04e-08!5;DOID:423!2.04e-08!5;DOID:0080000!2.04e-08!5;DOID:11722!2.04e-08!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002073!7.73e-11!4;UBERON:0005086!7.73e-11!4;UBERON:0002097!5.63e-09!40;UBERON:0002199!9.08e-08!45;UBERON:0002416!9.08e-08!45;UBERON:0000412!3.97e-07!3;UBERON:0001992!3.97e-07!3 | |ontology_enrichment_uberon=UBERON:0002073!7.73e-11!4;UBERON:0005086!7.73e-11!4;UBERON:0002097!5.63e-09!40;UBERON:0002199!9.08e-08!45;UBERON:0002416!9.08e-08!45;UBERON:0000412!3.97e-07!3;UBERON:0001992!3.97e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.91e-44;3!UBERON:0001992;1.91e-44;3!UBERON:0002073;3.55e-27;5!UBERON:0002067;1.31e-15;9!UBERON:0010371;3.95e-10;31!UBERON:0001003;8.85e-10;15!UBERON:0007376;8.85e-10;15!UBERON:0010077;1.22e-09;4!UBERON:0005389;1.22e-09;4!UBERON:0000484;1.22e-09;4!UBERON:0000965;1.22e-09;4!UBERON:0001803;1.22e-09;4!UBERON:0003422;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.22e-44,3;UBERON:0001992,1.22e-44,3;UBERON:0002073,2.72e-27,5;UBERON:0005086,2.72e-27,5;UBERON:0002067,1.13e-15,9;UBERON:0004016,1.13e-15,9;UBERON:0010083,1.13e-15,9;UBERON:0005085,2.29e-10,31;UBERON:0001003,8.10e-10,15;UBERON:0007376,8.10e-10,15;UBERON:0007383,8.10e-10,15;UBERON:0010077,1.22e-09,4;UBERON:0005389,1.22e-09,4;UBERON:0000484,1.22e-09,4;UBERON:0002546,1.22e-09,4;UBERON:0000965,1.22e-09,4;UBERON:0001803,1.22e-09,4;UBERON:0003073,1.22e-09,4;UBERON:0005426,1.22e-09,4;UBERON:0003422,8.97e-07,6 | |||
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| ||
|short_description=p@chr16:85617044..85617059,- | |short_description=p@chr16:85617044..85617059,- | ||
}} | }} |
Latest revision as of 13:00, 25 July 2015
Short description: | p@chr16:85617044..85617059, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85617044..85617059, - |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.22e-44 | 3 |
stem cell of epidermis | 1.22e-44 | 3 |
hair follicle cell | 2.72e-27 | 5 |
crystallin accumulating cell | 1.22e-09 | 4 |
vertebrate lens cell | 1.22e-09 | 4 |
lens epithelial cell | 1.22e-09 | 4 |
migratory neural crest cell | 1.11e-07 | 41 |
mesenchymal stem cell of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.22e-44 | 3 |
papillary layer of dermis | 1.22e-44 | 3 |
hair follicle | 2.72e-27 | 5 |
hair follicle placode | 2.72e-27 | 5 |
dermis | 1.13e-15 | 9 |
dermatome | 1.13e-15 | 9 |
future dermis | 1.13e-15 | 9 |
ectodermal placode | 2.29e-10 | 31 |
skin epidermis | 8.10e-10 | 15 |
outer epithelium | 8.10e-10 | 15 |
enveloping layer of ectoderm | 8.10e-10 | 15 |
cuboidal epithelium | 1.22e-09 | 4 |
transparent eye structure | 1.22e-09 | 4 |
simple cuboidal epithelium | 1.22e-09 | 4 |
cranial placode | 1.22e-09 | 4 |
lens of camera-type eye | 1.22e-09 | 4 |
epithelium of lens | 1.22e-09 | 4 |
lens placode | 1.22e-09 | 4 |
lens vesicle | 1.22e-09 | 4 |
mesenchyme of umbilical cord | 8.97e-07 | 6 |