FFCP PHASE1:Hg19::chr16:87873350..87873383,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:87873350..87873383,+ | |||
|description=CAGE_peak_at_chr16:87873350..87873383,+ | |description=CAGE_peak_at_chr16:87873350..87873383,+ | ||
|id=chr16:87873350..87873383,+ | |id=chr16:87873350..87873383,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.50e-26!254;CL:0002076!2.27e-12!43;CL:0000223!9.60e-11!59;CL:0000548!1.72e-09!679;CL:0000004!1.72e-09!679;CL:0000255!1.72e-09!679;CL:0000012!2.89e-09!682;CL:0000063!3.03e-09!578;CL:0002368!5.46e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.50e-26!254;CL:0002076!2.27e-12!43;CL:0000223!9.60e-11!59;CL:0000548!1.72e-09!679;CL:0000004!1.72e-09!679;CL:0000255!1.72e-09!679;CL:0000012!2.89e-09!682;CL:0000063!3.03e-09!578;CL:0002368!5.46e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.43e-11;42!CL:0002368;4.73e-08;13!CL:0002251;2.00e-07;20!CL:0000075;4.81e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.28e-38,253;CL:0002076,1.67e-15,42;CL:0000223,8.21e-15,58;CL:0002368,3.51e-08,13;CL:0002251,2.56e-07,20;CL:0002077,4.08e-07,34;CL:0000075,6.59e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.29e-08;29!CL:0000223;1.04e-07;58 | |||
|ontology_enrichment_disease=DOID:305!4.39e-17!106;DOID:0050687!6.02e-17!143;DOID:162!1.63e-16!235;DOID:14566!1.66e-15!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.64e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.96e-19,106;DOID:0050687,6.57e-16,143;DOID:162,3.80e-11,235;DOID:14566,1.77e-10,239;DOID:1749,5.44e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000065!1.83e-07!53;UBERON:0001737!1.85e-07!9;UBERON:0000072!5.71e-07!46;UBERON:0004119!9.03e-07!169;UBERON:0000925!9.03e-07!169;UBERON:0006595!9.03e-07!169 | |ontology_enrichment_uberon=UBERON:0000065!1.83e-07!53;UBERON:0001737!1.85e-07!9;UBERON:0000072!5.71e-07!46;UBERON:0004119!9.03e-07!169;UBERON:0000925!9.03e-07!169;UBERON:0006595!9.03e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.91e-12;9!UBERON:0001557;1.91e-12;9!UBERON:0000065;6.04e-09;44!UBERON:0000072;1.55e-08;37!UBERON:0005911;1.95e-08;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.18e-12,9;UBERON:0001004,3.03e-12,74;UBERON:0000065,1.25e-11,54;UBERON:0000072,6.51e-11,47;UBERON:0001557,1.89e-10,19;UBERON:0008947,1.15e-09,38;UBERON:0003258,1.15e-09,38;UBERON:0004119,3.55e-09,160;UBERON:0000925,3.55e-09,160;UBERON:0006595,3.55e-09,160 | |||
|phase1_expression=0.54503513781167,0,0.422863212287913,0,0,0.872338524100369,0,0,0,0.982935746006035,2.09340350391728,2.83973783769224,1.84636884759917,0.247532705920093,0,0,0,0,0,0,0.408001382488506,0.940364164434263,0,0.136874425072884,0.376627918784408,0.152826811495903,0.164201178899891,0.314843125254717,0,0,0.154816123316076,2.75826367343678,2.409647350226,2.9580320813343,0.46480320348181,0.142169232487422,0,0.553995408531877,0.401088894940283,0.434021741431704,0,0,0,0,0.377875943688809,0,0.464858073811369,1.23350366406548,0.309706370895104,1.1507695692886,0.512321413058201,0,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0.224723484445085,3.97909060082173,0.320929027076094,0,0.329851300186716,0,0,3.77272010217159,0,1.24564449799115,0.502497330513487,0.521482918420201,0.217188844705117,2.42159801053347,0.736555271975129,2.21523671208619,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0.270803863765016,0,0.390178042679635,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.80642697289893,1.33720097891754,0.144824403882799,0,0,1.02290049474824,3.2529523714611,0,1.01392563272577,0,0.973269740605272,0,0,0.351339142772504,0.458426764241994,8.37879163072847,11.1235332835329,0,0,0.132957960518865,1.19245312152671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,6.54141078213801,0.496971951695318,0.759783069987479,0.132409180813219,0.860509862246441,0.354668382198357,1.12135520028461,0,2.22000793575444,0,0.538842688278752,0.163461903113459,0,0,1.64025002283658,0.312160076830321,0,0.597794722207204,0.939475989150119,0,0.140450806702248,0,0.491337269247072,0,0,0,0,0.718618141816238,0.168336113954066,0.500474079487857,0,0,0,0.300476117813194,1.24775401476023,0.538168907066586,0.427114777637135,0.211931901159562,1.20036438433761,0.309157587715317,0.257640540045629,0.37223371266318,0,0.194874010322397,0,0.460249493211497,0.161646056818812,0.710019185033229,0.10075209822764,0.847802961552438,2.31913023795956,1.09098448236334,1.14721838155602,0,1.06023814657188,0.464775771478074,0,1.00928340350251,1.82488679537915,0,4.5026865673502,0,0,0,7.68994200258985,5.39471008249925,4.82022059766964,7.279402200338,9.15093665188106,5.45722423955522,2.29213223872279,4.90553662813365,4.23221872641029,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.245976877086227,1.02940686179115,2.30475599358114,6.74410519545717,5.73015142746296,2.4998880192803,0,1.03993478527958,8.6598805215164,0.115930404975077,1.52631302506568,0.288732895522148,0.462985512576611,0,0,0.858486162094873,0,0.234004265139238,0,0,0.503946384596579,0.992425680696705,7.70203295244495,6.1033127087932,1.91691339582606,0,0.088048434013226,0,0,0,2.79390734885544,0.381988425558278,0,3.4214489204541,5.55268460597947,6.00686115687835,4.0015700568281,0.112131084345361,0.43596006883328,0.07333828582095,1.16344544182,3.57656445851882,1.690605505112,0,0,0.257207374262142,0,0.532844358032199,0.714889968290738,0,0.823240336780769,0.325736184293735,0,1.58390374586686,0,0,0.099972991182057,0,0,0,2.15662369942424,1.14861935834114,0,0.144781306667579,0.61642896765115,0.179060963239896,1.79336230389644,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0.542530047399471,1.45579603071565,4.10386674233472,2.52323864054295,0.585707074963566,0.601892199455438,0,1.03473071292505,0.664225598535437,0,0.173767228936166,0,0.343143423810856,0,0,0.213455115606889,3.94065842880137,3.32870879020994,4.83824469327489,0.496215615637554,0.61384789315225,0.841980283299221,0.384417447767103,0,0.64341568457443,0,0,0.532685175939381,0,0,0.116210378459959,0.483437798366489,2.00506470303285,6.16942625870505,0.459257792658427,0.910455840033585,0.393373244878272,1.80479845162965,0.616122696835318,0.784349769176855,0,0.422206515571503,0,0.170093705276516,0.647747748306418,0,0.270946437543853,0.501689773854853,1.01950509218015,2.49322802678617,0.447749509444357,1.97333888981341,2.0914836081992,2.05160100093111,0,1.62689197332152,0.206082023295445,1.19040304263846,0.742585499285292,0,2.60024098414608,1.6068392984416,1.83674364755032,0.308097234229289,0.15350367472613,0.551346289938122,0.107420244868274,0.145016693914229,0.255679882248303,1.06838442776085,3.14041339185858,6.53446229041361,0.510450849978337,3.2370489873776,0.464845549297286,1.5740617341532,0,0.924100740528266,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.731140468893853,0,0.682499557039929,0.989838023675989,1.13008116620243,0,0,0,0,0,0.202910376962704,0.30982349809975,1.12678241012897,0.143411352204052,1.57198465620994,0.35667105148125,0,1.05553817648832,0.987884678879706,0.379473173765715,1.39973888097993,0.48111056362756,2.68120910214315,2.17781969722645,0.0941438007767792,3.44404298136984,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| ||
|short_description=p@chr16:87873350..87873383,+ | |short_description=p@chr16:87873350..87873383,+ | ||
}} | }} |
Latest revision as of 13:13, 25 July 2015
Short description: | p@chr16:87873350..87873383, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87873350..87873383, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.28e-38 | 253 |
endo-epithelial cell | 1.67e-15 | 42 |
endodermal cell | 8.21e-15 | 58 |
respiratory epithelial cell | 3.51e-08 | 13 |
epithelial cell of alimentary canal | 2.56e-07 | 20 |
ecto-epithelial cell | 4.08e-07 | 34 |
columnar/cuboidal epithelial cell | 6.59e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.18e-12 | 9 |
respiratory system | 3.03e-12 | 74 |
respiratory tract | 1.25e-11 | 54 |
segment of respiratory tract | 6.51e-11 | 47 |
upper respiratory tract | 1.89e-10 | 19 |
respiratory primordium | 1.15e-09 | 38 |
endoderm of foregut | 1.15e-09 | 38 |
endoderm-derived structure | 3.55e-09 | 160 |
endoderm | 3.55e-09 | 160 |
presumptive endoderm | 3.55e-09 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.96e-19 | 106 |
cell type cancer | 6.57e-16 | 143 |
cancer | 3.80e-11 | 235 |
disease of cellular proliferation | 1.77e-10 | 239 |
squamous cell carcinoma | 5.44e-08 | 14 |