FFCP PHASE1:Hg19::chr20:49411523..49411535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55653 | |EntrezGene=55653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14367 | |HGNC=14367 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000371608_5end | |association_with_transcript=0bp_to_ENST00000371608_5end | ||
|cluster_id=chr20:49411523..49411535,+ | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_4_at_BCAS4_5end | |description=CAGE_peak_4_at_BCAS4_5end | ||
|id=chr20:49411523..49411535,+ | |id=chr20:49411523..49411535,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;2.75e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,3.85e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.54e-23;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;2.40e-26;4!DOID:1612;2.40e-26;4!DOID:299;1.58e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.40e-26,4;DOID:1612,2.40e-26,4;DOID:299,1.57e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0005743!6.90e-13!86;UBERON:0001049!2.62e-12!57;UBERON:0005068!2.62e-12!57;UBERON:0006241!2.62e-12!57;UBERON:0007135!2.62e-12!57;UBERON:0000073!3.11e-12!94;UBERON:0001016!3.11e-12!94;UBERON:0001017!3.54e-12!82;UBERON:0002616!5.72e-12!59;UBERON:0003075!7.11e-12!86;UBERON:0007284!7.11e-12!86;UBERON:0000955!9.27e-12!69;UBERON:0006238!9.27e-12!69;UBERON:0000153!2.16e-11!129;UBERON:0007811!2.16e-11!129;UBERON:0002346!3.36e-11!90;UBERON:0000033!3.70e-11!123;UBERON:0001869!5.50e-11!32;UBERON:0001893!1.58e-10!34;UBERON:0002020!2.11e-10!34;UBERON:0003528!2.11e-10!34;UBERON:0002791!7.30e-10!33;UBERON:0002780!5.59e-09!41;UBERON:0001890!5.59e-09!41;UBERON:0006240!5.59e-09!41;UBERON:0002619!9.81e-09!22;UBERON:0000475!9.86e-09!365;UBERON:0003080!1.48e-08!42;UBERON:0003056!4.71e-08!61;UBERON:0004121!5.79e-08!169;UBERON:0000956!9.16e-08!25;UBERON:0000203!9.16e-08!25;UBERON:0000924!1.10e-07!173;UBERON:0006601!1.10e-07!173;UBERON:0001950!2.33e-07!20;UBERON:0000481!6.35e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;8.54e-23;2!UBERON:0005383;1.53e-15;3!UBERON:0005382;1.53e-15;3!UBERON:0000369;6.73e-12;4!UBERON:0002435;6.73e-12;4!UBERON:0000204;6.73e-12;4!UBERON:0000310;6.62e-11;10!UBERON:0001443;5.81e-10;11!UBERON:0001869;3.50e-08;32!UBERON:0003528;6.99e-08;34!UBERON:0002020;6.99e-08;34!UBERON:0002791;1.40e-07;32!UBERON:0009663;3.56e-07;7!UBERON:0001954;6.42e-07;2!UBERON:0003022;6.42e-07;2!UBERON:0002421;6.42e-07;2!UBERON:0002600;6.42e-07;2!UBERON:0000078;9.01e-07;2!UBERON:0002012;9.01e-07;2!UBERON:0008886;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,4.37e-23,2;UBERON:0010122,4.37e-23,2;UBERON:0005383,9.80e-16,3;UBERON:0005382,9.80e-16,3;UBERON:0000369,4.83e-12,4;UBERON:0002435,4.83e-12,4;UBERON:0000204,4.83e-12,4;UBERON:0010082,4.83e-12,4;UBERON:0000310,6.62e-11,10;UBERON:0001443,5.81e-10,11;UBERON:0002791,2.86e-08,32;UBERON:0001869,2.86e-08,32;UBERON:0003528,8.64e-08,34;UBERON:0002020,8.64e-08,34;UBERON:0001893,8.64e-08,34;UBERON:0009663,2.95e-07,7;UBERON:0001954,6.42e-07,2;UBERON:0003022,6.42e-07,2;UBERON:0002421,6.42e-07,2;UBERON:0002600,6.42e-07,2;UBERON:0001016,8.61e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0,0,0.369363174230364,0.408001382488506,0.626909442956176,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,0,0,0.30120591877825,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0.954053754535364,0,1.17447437874188,0,0,0,0.263384084775077,0.590129310341499,0,0.616804496998528,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0,0,0.164437904603676,0,0,0.296573126324121,1.07016331235885,0,0,0.383220493601921,0,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0,0.267440195783507,1.15859523106239,0,0,0.255725123687061,0,0,0,0.795285947051099,0,0,0.221729397462564,0.175669571386252,0.327447688744282,0.728590576585084,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,10.2726571734706,12.8772924314231,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0.35142424497814,0,0,0,0,0.553107505625109,0,0.783204629850962,0.343143423810856,0,0.215714200818617,0.320182673410333,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0,0.200506470303285,0,0,0,0,0.902399225814824,0.15403067420883,1.56869953835371,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0.330569830721956,0,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0.372158369359667,0,0,0.511795582622668,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.409499734223957,0,1.13008116620243,0.551365343546124,0,0,0.578775534266688,0,0,0,0.845086807596724,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0.427296284509893,0,0.245040215981032,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76217617423492,0,0,0,0,0.307160702099232,0,0.562677665642051,0.111308705022906,0.16480387422676,0,0,0,0,0,0.246169610922139,0.311039587661807,0.179736702294654,0,0,0.197286811273867,0,0,4.84666373047609,0.649376687132959,0,5.72941074387513,0,0,0.227586896570999,0,0,0,0,0,1.77148277162768,1.32656082487949,0,0.442317039724898,0.295547618953547,0.658156191461918,0,0.278847488557207,0.0769502585037971,0.341826167541004,0,0.0897576444097721,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0,0,0.843992258112108,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.468528891450678,0.91227394607833,0,0.242780379534093,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.554698692052555,0.173559738335131,0.195984794828755,0.0870592065804026,0,0.51595809741485,0,0,0,0,0.353024506766001,0.225980740780532,0,0,0.50648636764703,0,0,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.0984274815147488,0,2.38568906942791,0.408610218334727,0.321506296930038,0.412618309791701,0,0,0,0.425246896606173,0,0.0788057072991982,0.262272940674991,0,0.179287339332845,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0.157054096250234,0,0.366078794705889,0.876336514945499,0.573409195690071,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0.963099152036517,0,0,0,0.231522474323834,0,0,0.308801447160972,0,0.176689145945881,0,0.168942440653073,0,0.345430341731199,0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| 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| ||
|short_description=p4@BCAS4 | |short_description=p4@BCAS4 | ||
}} | }} |
Latest revision as of 22:30, 16 September 2015
Short description: | p4@BCAS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_BCAS4_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | 0bp_to_ENST00000371608_5end |
EntrezGene: | BCAS4 |
HGNC: | 14367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 3.85e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 4.37e-23 | 2 |
future caudate nucleus | 4.37e-23 | 2 |
caudate-putamen | 9.80e-16 | 3 |
dorsal striatum | 9.80e-16 | 3 |
corpus striatum | 4.83e-12 | 4 |
striatum | 4.83e-12 | 4 |
ventral part of telencephalon | 4.83e-12 | 4 |
future corpus striatum | 4.83e-12 | 4 |
breast | 6.62e-11 | 10 |
chest | 5.81e-10 | 11 |
regional part of telencephalon | 2.86e-08 | 32 |
cerebral hemisphere | 2.86e-08 | 32 |
brain grey matter | 8.64e-08 | 34 |
gray matter | 8.64e-08 | 34 |
telencephalon | 8.64e-08 | 34 |
telencephalic nucleus | 2.95e-07 | 7 |
Ammon's horn | 6.42e-07 | 2 |
lobe parts of cerebral cortex | 6.42e-07 | 2 |
hippocampal formation | 6.42e-07 | 2 |
limbic lobe | 6.42e-07 | 2 |
nervous system | 8.61e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.40e-26 | 4 |
breast cancer | 2.40e-26 | 4 |
adenocarcinoma | 1.57e-07 | 25 |