FFCP PHASE1:Hg19::chr20:56008066..56008071,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:56008066..56008071,- | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr20:56008066..56008071,- | |description=CAGE_peak_at_chr20:56008066..56008071,- | ||
|id=chr20:56008066..56008071,- | |id=chr20:56008066..56008071,- | ||
|ontology_enrichment_celltype=CL:0002057!6.11e-48!42;CL:0000860!2.18e-44!45;CL:0002087!1.56e-41!119;CL:0000738!2.47e-41!140;CL:0002031!1.36e-34!124;CL:0000037!3.79e-34!172;CL:0000566!3.79e-34!172;CL:0000988!7.77e-32!182;CL:0002032!1.04e-31!165;CL:0000837!1.04e-31!165;CL:0000766!1.35e-31!76;CL:0002194!1.25e-29!63;CL:0000576!1.25e-29!63;CL:0000040!1.25e-29!63;CL:0000559!1.25e-29!63;CL:0002009!1.44e-28!65;CL:0000839!3.49e-26!70;CL:0000557!9.55e-26!71;CL:0000763!1.98e-21!112;CL:0000049!1.98e-21!112;CL:0002393!3.96e-18!9;CL:0002397!3.96e-18!9;CL:0000767!9.49e-15!3;CL:0000623!4.67e-14!3;CL:0000825!4.67e-14!3;CL:0000134!3.64e-12!358;CL:0002320!8.99e-12!365;CL:0000219!2.19e-10!390;CL:0000838!9.82e-10!52;CL:0000542!1.66e-09!53;CL:0000051!1.66e-09!53;CL:0000048!9.96e-09!430;CL:0000723!1.71e-08!436;CL:0000034!3.45e-08!444;CL:0000945!3.76e-08!24;CL:0000826!3.76e-08!24;CL:0000842!3.17e-07!3;CL:0000875!9.08e-07!3;CL:0002396!9.08e-07!3 | |ontology_enrichment_celltype=CL:0002057!6.11e-48!42;CL:0000860!2.18e-44!45;CL:0002087!1.56e-41!119;CL:0000738!2.47e-41!140;CL:0002031!1.36e-34!124;CL:0000037!3.79e-34!172;CL:0000566!3.79e-34!172;CL:0000988!7.77e-32!182;CL:0002032!1.04e-31!165;CL:0000837!1.04e-31!165;CL:0000766!1.35e-31!76;CL:0002194!1.25e-29!63;CL:0000576!1.25e-29!63;CL:0000040!1.25e-29!63;CL:0000559!1.25e-29!63;CL:0002009!1.44e-28!65;CL:0000839!3.49e-26!70;CL:0000557!9.55e-26!71;CL:0000763!1.98e-21!112;CL:0000049!1.98e-21!112;CL:0002393!3.96e-18!9;CL:0002397!3.96e-18!9;CL:0000767!9.49e-15!3;CL:0000623!4.67e-14!3;CL:0000825!4.67e-14!3;CL:0000134!3.64e-12!358;CL:0002320!8.99e-12!365;CL:0000219!2.19e-10!390;CL:0000838!9.82e-10!52;CL:0000542!1.66e-09!53;CL:0000051!1.66e-09!53;CL:0000048!9.96e-09!430;CL:0000723!1.71e-08!436;CL:0000034!3.45e-08!444;CL:0000945!3.76e-08!24;CL:0000826!3.76e-08!24;CL:0000842!3.17e-07!3;CL:0000875!9.08e-07!3;CL:0002396!9.08e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002393;5.13e-23;6!CL:0002397;5.13e-23;6!CL:0000767;2.07e-12;3!CL:0000576;3.50e-09;48!CL:0000766;4.10e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.05e-15,9;CL:0002397,1.05e-15,9;CL:0000860,4.01e-13,42;CL:0002057,4.01e-13,42;CL:0000767,2.07e-12,3;CL:0000766,9.21e-12,72;CL:0000473,1.48e-11,48;CL:0000234,1.48e-11,48;CL:0002194,2.35e-09,59;CL:0000576,2.35e-09,59;CL:0000040,2.35e-09,59;CL:0000559,2.35e-09,59;CL:0000738,4.36e-09,136;CL:0002009,4.53e-09,61;CL:0000839,1.97e-08,66;CL:0000557,2.58e-08,67;CL:0000763,5.19e-08,108;CL:0000049,5.19e-08,108;CL:0002032,9.83e-08,161;CL:0000837,9.83e-08,161;CL:0002087,1.53e-07,115;CL:0000037,2.00e-07,168;CL:0002031,3.03e-07,120;CL:0000988,4.60e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.51e-24!102;UBERON:0003061!5.51e-24!102;UBERON:0002371!2.68e-22!80;UBERON:0002193!2.55e-21!112;UBERON:0001474!2.13e-20!86;UBERON:0002405!4.91e-17!115;UBERON:0004765!1.24e-16!101;UBERON:0001434!1.24e-16!101;UBERON:0002384!3.09e-11!375;UBERON:0003081!3.96e-09!216;UBERON:0002204!3.99e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.12e-07,76;UBERON:0001474,6.74e-07,82 | |||
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|short_description=p@chr20:56008066..56008071,- | |short_description=p@chr20:56008066..56008071,- | ||
}} | }} |
Latest revision as of 15:42, 28 July 2015
Short description: | p@chr20:56008066..56008071, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:56008066..56008071, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.05e-15 | 9 |
CD14-positive, CD16-positive monocyte | 1.05e-15 | 9 |
classical monocyte | 4.01e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.01e-13 | 42 |
basophil | 2.07e-12 | 3 |
myeloid leukocyte | 9.21e-12 | 72 |
defensive cell | 1.48e-11 | 48 |
phagocyte | 1.48e-11 | 48 |
monopoietic cell | 2.35e-09 | 59 |
monocyte | 2.35e-09 | 59 |
monoblast | 2.35e-09 | 59 |
promonocyte | 2.35e-09 | 59 |
leukocyte | 4.36e-09 | 136 |
macrophage dendritic cell progenitor | 4.53e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.97e-08 | 66 |
granulocyte monocyte progenitor cell | 2.58e-08 | 67 |
myeloid cell | 5.19e-08 | 108 |
common myeloid progenitor | 5.19e-08 | 108 |
hematopoietic oligopotent progenitor cell | 9.83e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.83e-08 | 161 |
nongranular leukocyte | 1.53e-07 | 115 |
hematopoietic stem cell | 2.00e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 3.03e-07 | 120 |
hematopoietic cell | 4.60e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.12e-07 | 76 |
bone element | 6.74e-07 | 82 |