FFCP PHASE1:Hg19::chr20:57875631..57875638,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1908 | |EntrezGene=1908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3178 | |HGNC=3178 | ||
|TSSclassifier=strong | |||
|UniProt=Q4FAT2 | |UniProt=Q4FAT2 | ||
|association_with_transcript=-34bp_to_ENST00000371025_5end | |association_with_transcript=-34bp_to_ENST00000371025_5end | ||
|cluster_id=chr20:57875631..57875638,+ | |||
|coexpression_cluster_id=C4056 | |||
|description=CAGE_peak_6_at_EDN3_5end | |description=CAGE_peak_6_at_EDN3_5end | ||
|id=chr20:57875631..57875638,+ | |id=chr20:57875631..57875638,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;5.97e-34;1!UBERON:0008801;5.97e-34;1!UBERON:0003056;1.96e-12;3!UBERON:0007123;6.78e-08;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-25!115;UBERON:0002780!2.02e-13!41;UBERON:0001890!2.02e-13!41;UBERON:0006240!2.02e-13!41;UBERON:0003080!4.81e-13!42;UBERON:0001049!3.15e-12!57;UBERON:0005068!3.15e-12!57;UBERON:0006241!3.15e-12!57;UBERON:0007135!3.15e-12!57;UBERON:0002616!1.04e-11!59;UBERON:0000153!4.91e-11!129;UBERON:0007811!4.91e-11!129;UBERON:0000955!8.22e-11!69;UBERON:0006238!8.22e-11!69;UBERON:0003296!3.79e-10!4;UBERON:0010133!3.79e-10!4;UBERON:0001829!4.00e-10!2;UBERON:0003056!9.10e-10!61;UBERON:0000481!1.25e-09!347;UBERON:0001893!1.61e-09!34;UBERON:0000033!1.83e-09!123;UBERON:0000007!1.97e-09!2;UBERON:0005743!2.34e-09!86;UBERON:0001017!1.32e-08!82;UBERON:0001950!1.71e-08!20;UBERON:0003075!2.63e-08!86;UBERON:0007284!2.63e-08!86;UBERON:0001869!2.93e-08!32;UBERON:0004921!3.38e-08!129;UBERON:0004185!3.38e-08!129;UBERON:0000073!3.78e-08!94;UBERON:0001016!3.78e-08!94;UBERON:0002791!5.72e-08!33;UBERON:0001007!7.97e-08!155;UBERON:0001555!7.97e-08!155;UBERON:0007026!7.97e-08!155;UBERON:0002346!8.59e-08!90;UBERON:0000062!8.74e-08!511;UBERON:0001872!8.84e-08!5;UBERON:0002619!1.13e-07!22;UBERON:0004119!1.26e-07!169;UBERON:0000925!1.26e-07!169;UBERON:0006595!1.26e-07!169;UBERON:0001044!2.50e-07!6;UBERON:0003293!2.50e-07!6;UBERON:0003294!2.50e-07!6;UBERON:0010047!2.50e-07!6;UBERON:0000167!2.50e-07!6;UBERON:0003408!4.51e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.53e-66;2!UBERON:0001831;5.97e-34;1!UBERON:0001736;5.97e-34;1!UBERON:0001567;5.97e-34;1!UBERON:0001044;7.58e-23;6!UBERON:0003293;7.58e-23;6!UBERON:0003294;7.58e-23;6!UBERON:0010047;7.58e-23;6!UBERON:0003408;7.58e-23;6!UBERON:0000167;7.58e-23;6!UBERON:0004089;9.86e-18;2!UBERON:0001041;2.08e-10;14!UBERON:0004921;1.64e-08;33!UBERON:0000966;5.54e-08;5!UBERON:0005388;5.54e-08;5!UBERON:0001802;5.54e-08;5!UBERON:0000161;6.36e-08;19!UBERON:0000166;6.36e-08;19!UBERON:0002108;6.78e-08;4!UBERON:0002046;6.78e-08;5!UBERON:0001456;2.69e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.96e-66,2;UBERON:0001736,3.61e-34,1;UBERON:0006298,3.61e-34,1;UBERON:0001831,7.06e-34,1;UBERON:0001567,7.06e-34,1;UBERON:0008801,7.06e-34,1;UBERON:0001044,6.78e-23,6;UBERON:0003293,6.78e-23,6;UBERON:0003294,6.78e-23,6;UBERON:0010047,6.78e-23,6;UBERON:0000167,6.78e-23,6;UBERON:0004089,1.07e-17,2;UBERON:0003408,3.47e-14,10;UBERON:0002108,6.55e-08,4;UBERON:0002046,7.49e-08,5;UBERON:0004117,7.49e-08,5;UBERON:0007689,7.49e-08,5;UBERON:0007123,7.49e-08,5;UBERON:0003091,7.49e-08,5;UBERON:0007023,1.16e-07,114;UBERON:0001456,5.40e-07,22;UBERON:0000166,5.57e-07,22;UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6;UBERON:0001444,8.40e-07,49 | |||
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| ||
|short_description=p6@EDN3 | |short_description=p6@EDN3 | ||
}} | }} |
Latest revision as of 07:38, 17 September 2015
Short description: | p6@EDN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EDN3_5end |
Coexpression cluster: | C4056_retina_anaplastic_pituitary_small_salivary_submaxillary_thyroid |
Association with transcript: | -34bp_to_ENST00000371025_5end |
EntrezGene: | EDN3 |
HGNC: | 3178 |
UniProt: | Q4FAT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.96e-66 | 2 |
submandibular gland | 3.61e-34 | 1 |
submandibular gland primordium | 3.61e-34 | 1 |
parotid gland | 7.06e-34 | 1 |
cheek | 7.06e-34 | 1 |
parotid gland primordium | 7.06e-34 | 1 |
saliva-secreting gland | 6.78e-23 | 6 |
gland of oral region | 6.78e-23 | 6 |
gland of foregut | 6.78e-23 | 6 |
oral gland | 6.78e-23 | 6 |
oral cavity | 6.78e-23 | 6 |
midface | 1.07e-17 | 2 |
gland of gut | 3.47e-14 | 10 |
small intestine | 6.55e-08 | 4 |
thyroid gland | 7.49e-08 | 5 |
pharyngeal pouch | 7.49e-08 | 5 |
thyroid diverticulum | 7.49e-08 | 5 |
pharyngeal pouch 2 | 7.49e-08 | 5 |
thyroid primordium | 7.49e-08 | 5 |
adult organism | 1.16e-07 | 114 |
face | 5.40e-07 | 22 |
oral opening | 5.57e-07 | 22 |
retina | 7.58e-07 | 6 |
photoreceptor array | 7.58e-07 | 6 |
posterior segment of eyeball | 7.58e-07 | 6 |
subdivision of head | 8.40e-07 | 49 |