FFCP PHASE1:Hg19::chr11:101000524..101000535,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5241 | |EntrezGene=5241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8910 | |HGNC=8910 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXE8,P06401,Q8TDS3 | |UniProt=F5GXE8,P06401,Q8TDS3 | ||
|association_with_transcript=8bp_to_ENST00000537623,NM_000926,uc001pgh.2,uc001pgi.2,uc001pgj.2,uc009yww.1,uc009ywx.1_5end | |||
|cluster_id=chr11:101000524..101000535,- | |||
|coexpression_cluster_id=C233 | |||
|description=CAGE_peak_3_at_PGR_5end | |||
|id=chr11:101000524..101000535,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.89e-20;2!UBERON:0006298;4.15e-11;1!UBERON:0005754;4.15e-11;1!UBERON:0010227;1.10e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.07e-10;4!DOID:1612;1.07e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.10e-10,4;DOID:1612,1.10e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.38e-49!115;UBERON:0001049!9.03e-11!57;UBERON:0005068!9.03e-11!57;UBERON:0006241!9.03e-11!57;UBERON:0007135!9.03e-11!57;UBERON:0003075!3.20e-09!86;UBERON:0007284!3.20e-09!86;UBERON:0002616!5.22e-09!59;UBERON:0002346!1.44e-08!90;UBERON:0003080!2.12e-08!42;UBERON:0002298!2.38e-07!8;UBERON:0002780!2.39e-07!41;UBERON:0001890!2.39e-07!41;UBERON:0006240!2.39e-07!41;UBERON:0001869!3.72e-07!32;UBERON:0005743!3.81e-07!86;UBERON:0000955!5.93e-07!69;UBERON:0006238!5.93e-07!69;UBERON:0001017!7.78e-07!82;UBERON:0000073!9.19e-07!94;UBERON:0001016!9.19e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.09e-13;3!UBERON:0004054;1.09e-13;3!UBERON:0006834;2.53e-11;1!UBERON:0000998;4.15e-11;1!UBERON:0001736;4.15e-11;1!UBERON:0006868;4.15e-11;1!UBERON:0005795;1.10e-10;1!UBERON:0002079;1.10e-10;1!UBERON:0002135;1.10e-10;1!UBERON:0001301;1.10e-10;1!UBERON:0005904;1.69e-10;4!UBERON:0004175;1.29e-07;21!UBERON:0001044;2.78e-07;6!UBERON:0003293;2.78e-07;6!UBERON:0003294;2.78e-07;6!UBERON:0010047;2.78e-07;6!UBERON:0003408;2.78e-07;6!UBERON:0000167;2.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.32e-13,3;UBERON:0004054,1.32e-13,3;UBERON:0006834,2.53e-11,1;UBERON:0000998,3.76e-11,1;UBERON:0006868,3.76e-11,1;UBERON:0001736,4.58e-11,1;UBERON:0006298,4.58e-11,1;UBERON:0002135,9.05e-11,1;UBERON:0002079,1.10e-10,1;UBERON:0001301,1.61e-10,1;UBERON:0005904,1.95e-10,4;UBERON:0007023,3.70e-10,114;UBERON:0001044,2.61e-07,6;UBERON:0003293,2.61e-07,6;UBERON:0003294,2.61e-07,6;UBERON:0010047,2.61e-07,6;UBERON:0000167,2.61e-07,6 | |||
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| ||
|short_description=p3@PGR | |||
}} | }} |
Latest revision as of 07:54, 20 September 2015
Short description: | p3@PGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PGR_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 8bp_to_ENST00000537623, NM_000926, uc001pgh.2, uc001pgi.2, uc001pgj.2, uc009yww.1, uc009ywx.1_5end |
EntrezGene: | PGR |
HGNC: | 8910 |
UniProt: | F5GXE8P06401Q8TDS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.32e-13 | 3 |
internal male genitalia | 1.32e-13 | 3 |
uterus or analog | 2.53e-11 | 1 |
seminal vesicle | 3.76e-11 | 1 |
seminal fluid secreting gland | 3.76e-11 | 1 |
submandibular gland | 4.58e-11 | 1 |
submandibular gland primordium | 4.58e-11 | 1 |
mitral valve | 9.05e-11 | 1 |
left cardiac atrium | 1.10e-10 | 1 |
epididymis | 1.61e-10 | 1 |
duct of male reproductive system | 1.95e-10 | 4 |
adult organism | 3.70e-10 | 114 |
saliva-secreting gland | 2.61e-07 | 6 |
gland of oral region | 2.61e-07 | 6 |
gland of foregut | 2.61e-07 | 6 |
oral gland | 2.61e-07 | 6 |
oral cavity | 2.61e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.10e-10 | 4 |
breast cancer | 1.10e-10 | 4 |