FFCP PHASE1:Hg19::chr22:31487193..31487207,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6525 | |EntrezGene=6525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11126 | |HGNC=11126 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=246bp_to_uc011alg.1_5end | |association_with_transcript=246bp_to_uc011alg.1_5end | ||
|cluster_id=chr22:31487193..31487207,+ | |||
|coexpression_cluster_id=C727 | |||
|description=CAGE_peak_19_at_SMTN_5end | |description=CAGE_peak_19_at_SMTN_5end | ||
|id=chr22:31487193..31487207,+ | |id=chr22:31487193..31487207,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.17e-15;1!UBERON:0001045;1.84e-14;1!UBERON:0005754;1.84e-14;1!UBERON:0004874;1.84e-14;1!UBERON:0007297;7.03e-08;2!UBERON:0006603;2.35e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.25e-08!115;UBERON:0006947!3.26e-08!3;UBERON:0004054!3.26e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;8.72e-24;9!UBERON:0000059;1.56e-19;11!UBERON:0006947;1.94e-18;3!UBERON:0004054;1.94e-18;3!UBERON:0006834;1.84e-14;1!UBERON:0001154;1.84e-14;1!UBERON:0001000;1.84e-14;1!UBERON:0000989;1.84e-14;1!UBERON:0000998;1.84e-14;1!UBERON:0001153;1.84e-14;1!UBERON:0008811;1.84e-14;1!UBERON:0006868;1.84e-14;1!UBERON:0009854;1.84e-14;1!UBERON:0005352;1.84e-14;1!UBERON:0005904;4.40e-14;4!UBERON:0000160;4.64e-12;17!UBERON:0003135;2.43e-11;11!UBERON:0004175;2.84e-10;21!UBERON:0003101;7.04e-10;22!UBERON:0000079;7.04e-10;22!UBERON:0004921;1.43e-09;33!UBERON:0005409;1.71e-09;22!UBERON:0001255;4.09e-08;2!UBERON:0001556;4.09e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.14e-23,9;UBERON:0000059,1.94e-19,11;UBERON:0006947,1.48e-18,3;UBERON:0004054,1.48e-18,3;UBERON:0007023,1.98e-15,114;UBERON:0001000,1.07e-14,1;UBERON:0005352,1.07e-14,1;UBERON:0000989,1.23e-14,1;UBERON:0008811,1.23e-14,1;UBERON:0006258,1.23e-14,1;UBERON:0005876,1.23e-14,1;UBERON:0004874,1.23e-14,1;UBERON:0006834,1.41e-14,1;UBERON:0001154,1.61e-14,1;UBERON:0001153,1.61e-14,1;UBERON:0001045,1.61e-14,1;UBERON:0000998,2.11e-14,1;UBERON:0006868,2.11e-14,1;UBERON:0005904,3.61e-14,4;UBERON:0000160,5.28e-12,17;UBERON:0003135,1.96e-11,11;UBERON:0003101,5.98e-10,22;UBERON:0000079,5.98e-10,22;UBERON:0004175,1.03e-08,25;UBERON:0005409,2.19e-08,25;UBERON:0001255,4.09e-08,2;UBERON:0001556,4.09e-08,2;UBERON:0003064,6.77e-08,28;UBERON:0005156,8.76e-08,59;UBERON:0000990,8.76e-08,59;UBERON:0001046,6.24e-07,19;UBERON:0003133,7.72e-07,48 | |||
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| ||
|short_description=p19@SMTN | |short_description=p19@SMTN | ||
}} | }} |
Latest revision as of 19:18, 19 September 2015
Short description: | p19@SMTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SMTN_5end |
Coexpression cluster: | C727_colon_smooth_rectum_duodenum_bladder_esophagus_prostate |
Association with transcript: | 246bp_to_uc011alg.1_5end |
EntrezGene: | SMTN |
HGNC: | 11126 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
colon | 1.14e-23 | 9 |
large intestine | 1.94e-19 | 11 |
male genital duct | 1.48e-18 | 3 |
internal male genitalia | 1.48e-18 | 3 |
adult organism | 1.98e-15 | 114 |
vas deferens | 1.07e-14 | 1 |
spermatic cord | 1.07e-14 | 1 |
penis | 1.23e-14 | 1 |
intromittent organ | 1.23e-14 | 1 |
lateral plate mesenchyme | 1.23e-14 | 1 |
undifferentiated genital tubercle | 1.23e-14 | 1 |
somatopleure | 1.23e-14 | 1 |
uterus or analog | 1.41e-14 | 1 |
vermiform appendix | 1.61e-14 | 1 |
caecum | 1.61e-14 | 1 |
midgut | 1.61e-14 | 1 |
seminal vesicle | 2.11e-14 | 1 |
seminal fluid secreting gland | 2.11e-14 | 1 |
duct of male reproductive system | 3.61e-14 | 4 |
intestine | 5.28e-12 | 17 |
male reproductive organ | 1.96e-11 | 11 |
male organism | 5.98e-10 | 22 |
male reproductive system | 5.98e-10 | 22 |
internal genitalia | 1.03e-08 | 25 |
gastrointestinal system | 2.19e-08 | 25 |
urinary bladder | 4.09e-08 | 2 |
lower urinary tract | 4.09e-08 | 2 |
intermediate mesoderm | 6.77e-08 | 28 |
reproductive structure | 8.76e-08 | 59 |
reproductive system | 8.76e-08 | 59 |
hindgut | 6.24e-07 | 19 |
reproductive organ | 7.72e-07 | 48 |