FFCP PHASE1:Hg19::chr17:46678419..46678455,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:46678419..46678455,- | |||
|description=CAGE_peak_at_chr17:46678419..46678455,- | |description=CAGE_peak_at_chr17:46678419..46678455,- | ||
|id=chr17:46678419..46678455,- | |id=chr17:46678419..46678455,- | ||
|ontology_enrichment_celltype=CL:0000066!7.61e-12!254 | |ontology_enrichment_celltype=CL:0000066!7.61e-12!254 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.05e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.07e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006241;6.58e-07;3!UBERON:0003057;6.58e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!6.66e-21!143;DOID:14566!6.35e-16!239;DOID:162!1.17e-15!235;DOID:305!2.55e-14!106 | |ontology_enrichment_disease=DOID:0050687!6.66e-21!143;DOID:14566!6.35e-16!239;DOID:162!1.17e-15!235;DOID:305!2.55e-14!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.65e-17,143;DOID:14566,1.05e-14,239;DOID:162,7.52e-14,235;DOID:305,1.26e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0005409!3.01e-08!35;UBERON:0000059!4.48e-08!11;UBERON:0001737!3.19e-07!9;UBERON:0000489!4.03e-07!32;UBERON:0000160!5.61e-07!27 | |ontology_enrichment_uberon=UBERON:0005409!3.01e-08!35;UBERON:0000059!4.48e-08!11;UBERON:0001737!3.19e-07!9;UBERON:0000489!4.03e-07!32;UBERON:0000160!5.61e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0000059;7.08e-09;11!UBERON:0005409;8.59e-09;22!UBERON:0000160;3.95e-08;17!UBERON:0006947;5.81e-08;3!UBERON:0004054;5.81e-08;3!UBERON:0000058;7.72e-08;10!UBERON:0004907;5.61e-07;5!UBERON:0002050;6.42e-07;5!UBERON:0005423;6.42e-07;5!UBERON:0002240;6.58e-07;3!UBERON:0005174;6.58e-07;3!UBERON:0001137;6.58e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,7.51e-09,11;UBERON:0000160,3.55e-08,17;UBERON:0006947,5.26e-08,3;UBERON:0004054,5.26e-08,3;UBERON:0005409,1.65e-07,25;UBERON:0000489,2.35e-07,31;UBERON:0002240,4.18e-07,3;UBERON:0005174,4.18e-07,3;UBERON:0001137,4.18e-07,3;UBERON:0004907,5.62e-07,5 | |||
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| ||
|short_description=p@chr17:46678419..46678455,- | |short_description=p@chr17:46678419..46678455,- | ||
}} | }} |
Latest revision as of 18:10, 25 July 2015
Short description: | p@chr17:46678419..46678455, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46678419..46678455, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.07e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
large intestine | 7.51e-09 | 11 |
intestine | 3.55e-08 | 17 |
male genital duct | 5.26e-08 | 3 |
internal male genitalia | 5.26e-08 | 3 |
gastrointestinal system | 1.65e-07 | 25 |
cavitated compound organ | 2.35e-07 | 31 |
spinal cord | 4.18e-07 | 3 |
dorsal region element | 4.18e-07 | 3 |
dorsum | 4.18e-07 | 3 |
lower digestive tract | 5.62e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.65e-17 | 143 |
disease of cellular proliferation | 1.05e-14 | 239 |
cancer | 7.52e-14 | 235 |
carcinoma | 1.26e-10 | 106 |