FFCP PHASE1:Hg19::chr11:75201755..75201762,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:75201755..75201762,-
|short_description=p7@GDPD5
|description=CAGE_peak_7_at_GDPD5_5end
|association_with_transcript=33bp_to_ENST00000529721,uc001owo.3_5e...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81544 | |EntrezGene=81544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28804 | |HGNC=28804 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000529721,uc001owo.3_5end | |||
|cluster_id=chr11:75201755..75201762,- | |||
|description=CAGE_peak_7_at_GDPD5_5end | |||
|id=chr11:75201755..75201762,- | |||
|ontology_enrichment_celltype=CL:0000066!3.92e-18!254;CL:0000077!2.10e-16!19;CL:0000076!3.68e-10!62;CL:0000220!1.22e-09!246;CL:0002321!1.80e-09!248;CL:0002586!5.50e-09!3;CL:0000213!5.70e-09!57;CL:0000215!5.70e-09!57;CL:0000064!6.85e-08!3;CL:0005012!6.85e-08!3;CL:0000067!6.85e-08!3;CL:0002304!6.85e-08!3;CL:0000149!8.55e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;3.12e-50;3!CL:0000149;6.72e-38;4!CL:0000077;2.24e-14;19!CL:0000147;2.45e-11;14!CL:0002097;7.98e-10;2!CL:0000174;5.80e-07;3!CL:0000064;9.37e-07;3!CL:0000067;9.37e-07;3!CL:0005012;9.37e-07;3!CL:0002304;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.89e-50,3;CL:0000149,4.61e-38,4;CL:0000077,2.28e-14,19;CL:0000147,2.20e-11,14;CL:0002097,7.98e-10,2;CL:0000066,5.39e-07,253;CL:0000174,5.80e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.16e-11!235;DOID:14566!1.26e-10!239;DOID:305!8.28e-09!106;DOID:0050687!3.81e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:170;4.42e-12;6!DOID:4074;1.64e-09;2!DOID:4905;1.64e-09;2!DOID:3498;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:170,5.08e-12,6;DOID:4074,2.02e-09,2;DOID:4905,2.02e-09,2;DOID:3498,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007625!3.63e-17!11;UBERON:0000488!3.42e-10!4;UBERON:0000019!4.22e-09!19;UBERON:0000047!4.22e-09!19;UBERON:0004088!4.22e-09!19;UBERON:0003072!4.22e-09!19;UBERON:0003071!4.22e-09!19;UBERON:0004128!4.22e-09!19;UBERON:0001781!5.50e-09!3;UBERON:0001782!5.50e-09!3;UBERON:0005424!5.50e-09!3;UBERON:0000970!1.50e-08!20;UBERON:0002104!4.70e-08!21;UBERON:0001456!4.70e-08!21;UBERON:0001778!6.85e-08!3;UBERON:0001775!6.85e-08!3;UBERON:0000020!3.42e-07!23;UBERON:0001032!8.13e-07!24;UBERON:0004456!8.13e-07!24;UBERON:0002203!9.19e-07!6;UBERON:0001768!9.19e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;3.12e-50;3!UBERON:0001782;3.12e-50;3!UBERON:0007625;2.01e-37;11!UBERON:0000966;1.73e-30;5!UBERON:0005388;1.73e-30;5!UBERON:0001802;1.73e-30;5!UBERON:0000019;9.19e-22;19!UBERON:0000047;9.19e-22;19!UBERON:0004088;9.19e-22;19!UBERON:0010230;9.19e-22;19!UBERON:0000970;1.10e-20;20!UBERON:0002104;1.05e-19;21!UBERON:0001456;1.05e-19;21!UBERON:0000020;5.26e-18;23!UBERON:0001032;2.92e-17;24!UBERON:0004456;2.92e-17;24!UBERON:0010371;2.04e-12;31!UBERON:0006562;1.64e-09;2!UBERON:0002369;5.80e-07;3!UBERON:0001235;5.80e-07;3!UBERON:0006858;5.80e-07;3!UBERON:0000033;6.03e-07;50!UBERON:0001778;9.37e-07;3!UBERON:0001775;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.89e-50,3;UBERON:0005424,1.89e-50,3;UBERON:0001781,4.61e-38,4;UBERON:0007625,1.86e-37,11;UBERON:0000966,1.19e-25,6;UBERON:0005388,1.19e-25,6;UBERON:0001802,1.19e-25,6;UBERON:0000019,1.06e-20,20;UBERON:0000047,1.06e-20,20;UBERON:0010312,1.06e-20,20;UBERON:0004088,1.06e-20,20;UBERON:0010230,1.06e-20,20;UBERON:0003072,1.06e-20,20;UBERON:0004128,1.06e-20,20;UBERON:0003071,1.06e-20,20;UBERON:0000970,1.01e-19,21;UBERON:0002104,1.01e-19,21;UBERON:0001456,7.81e-19,22;UBERON:0000020,2.82e-17,24;UBERON:0001032,2.82e-17,24;UBERON:0004456,2.82e-17,24;UBERON:0005085,2.13e-13,31;UBERON:0001444,1.73e-08,49;UBERON:0000033,2.00e-07,56;UBERON:0002369,5.80e-07,3;UBERON:0001235,5.80e-07,3;UBERON:0006858,5.80e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,3.59030175162945,1.96808787419823,2.60302715731442,0.206082023295445,0.27470839445503,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0,0,2.86352311006033,0,0,0.718946809178615,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0.19871461170299,0,0,0.320635281006135,0,0,0,0,0,0,0.124252535565433,0,0.543616824294456,0.209205692624666,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,4.50327341887344,0.260994291965212,2.04035332961045,0.926089897295336,0.489473409012935,0,2.47041157728778,1.75427239662966,0.353378291891762,0.38582807654183,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,1.53314913167514,0,0,0,0,0.79832133146375,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756998549010474,0,0,0.713921808193872,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.98667019366864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,3.59030175162945,1.96808787419823,2.60302715731442,0.206082023295445,0.27470839445503,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0,0,2.86352311006033,0,0,0.718946809178615,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0.19871461170299,0,0,0.320635281006135,0,0,0,0,0,0,0.124252535565433,0,0.543616824294456,0.209205692624666,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,4.50327341887344,0.260994291965212,2.04035332961045,0.926089897295336,0.489473409012935,0,2.47041157728778,1.75427239662966,0.353378291891762,0.38582807654183,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.183428598521679,0,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,1.53314913167514,0,0,0,0,0.79832133146375,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756998549010474,0,0,0.713921808193872,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@GDPD5 | |||
}} | }} |
Latest revision as of 06:16, 20 September 2015
Short description: | p7@GDPD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GDPD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000529721, uc001owo.3_5end |
EntrezGene: | GDPD5 |
HGNC: | 28804 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.89e-50 | 3 |
visual pigment cell | 4.61e-38 | 4 |
mesothelial cell | 2.28e-14 | 19 |
pigment cell | 2.20e-11 | 14 |
cortical cell of adrenal gland | 7.98e-10 | 2 |
epithelial cell | 5.39e-07 | 253 |
steroid hormone secreting cell | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.89e-50 | 3 |
presumptive retinal pigmented epithelium | 1.89e-50 | 3 |
layer of retina | 4.61e-38 | 4 |
pigment epithelium of eye | 1.86e-37 | 11 |
retina | 1.19e-25 | 6 |
photoreceptor array | 1.19e-25 | 6 |
posterior segment of eyeball | 1.19e-25 | 6 |
camera-type eye | 1.06e-20 | 20 |
simple eye | 1.06e-20 | 20 |
immature eye | 1.06e-20 | 20 |
ocular region | 1.06e-20 | 20 |
eyeball of camera-type eye | 1.06e-20 | 20 |
optic cup | 1.06e-20 | 20 |
optic vesicle | 1.06e-20 | 20 |
eye primordium | 1.06e-20 | 20 |
eye | 1.01e-19 | 21 |
visual system | 1.01e-19 | 21 |
face | 7.81e-19 | 22 |
sense organ | 2.82e-17 | 24 |
sensory system | 2.82e-17 | 24 |
entire sense organ system | 2.82e-17 | 24 |
ectodermal placode | 2.13e-13 | 31 |
subdivision of head | 1.73e-08 | 49 |
head | 2.00e-07 | 56 |
adrenal gland | 5.80e-07 | 3 |
adrenal cortex | 5.80e-07 | 3 |
adrenal/interrenal gland | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 5.08e-12 | 6 |
pancreas adenocarcinoma | 2.02e-09 | 2 |
pancreatic carcinoma | 2.02e-09 | 2 |
pancreatic ductal adenocarcinoma | 2.02e-09 | 2 |