FFCP PHASE1:Hg19::chr2:106415317..106415347,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:106415317..106415347,- | |||
|coexpression_cluster_id=C1070 | |||
|description=CAGE_peak_at_chr2:106415317..106415347,- | |description=CAGE_peak_at_chr2:106415317..106415347,- | ||
|id=chr2:106415317..106415347,- | |id=chr2:106415317..106415347,- | ||
|ontology_enrichment_celltype=CL:0000945!2.65e-37!24;CL:0000826!2.65e-37!24;CL:0000838!2.05e-32!52;CL:0000542!1.09e-31!53;CL:0000051!1.09e-31!53;CL:0000037!3.38e-19!172;CL:0000566!3.38e-19!172;CL:0002032!5.91e-19!165;CL:0000837!5.91e-19!165;CL:0000988!6.63e-19!182;CL:0000738!9.71e-18!140;CL:0002087!3.29e-13!119;CL:0000236!1.09e-12!14;CL:0002031!1.95e-12!124;CL:0000785!6.02e-09!2;CL:0000955!6.02e-09!2;CL:0000818!6.02e-09!2;CL:0000954!6.02e-09!2;CL:0000816!6.02e-09!2 | |ontology_enrichment_celltype=CL:0000945!2.65e-37!24;CL:0000826!2.65e-37!24;CL:0000838!2.05e-32!52;CL:0000542!1.09e-31!53;CL:0000051!1.09e-31!53;CL:0000037!3.38e-19!172;CL:0000566!3.38e-19!172;CL:0002032!5.91e-19!165;CL:0000837!5.91e-19!165;CL:0000988!6.63e-19!182;CL:0000738!9.71e-18!140;CL:0002087!3.29e-13!119;CL:0000236!1.09e-12!14;CL:0002031!1.95e-12!124;CL:0000785!6.02e-09!2;CL:0000955!6.02e-09!2;CL:0000818!6.02e-09!2;CL:0000954!6.02e-09!2;CL:0000816!6.02e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.34e-23;1!CL:0000911;1.34e-23;1!CL:0000814;1.34e-23;1!CL:0000945;3.55e-23;24!CL:0000946;4.59e-23;1!CL:0000786;4.59e-23;1!CL:0000775;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.34e-23,1;CL:0000914,1.34e-23,1;CL:0000911,1.34e-23,1;CL:0000814,1.34e-23,1;CL:0002042,1.34e-23,1;CL:0002039,1.34e-23,1;CL:0002040,1.34e-23,1;CL:0002041,1.34e-23,1;CL:0000945,3.63e-23,24;CL:0000826,3.63e-23,24;CL:0000946,5.13e-23,1;CL:0000786,5.13e-23,1;CL:0000980,5.13e-23,1;CL:0000838,2.42e-15,52;CL:0000542,4.71e-15,53;CL:0000051,4.71e-15,53;CL:0000893,1.65e-12,2;CL:0002489,1.65e-12,2;CL:0000809,1.65e-12,2;CL:0000808,1.65e-12,2;CL:0000894,1.65e-12,2;CL:0000806,1.65e-12,2;CL:0000807,1.65e-12,2;CL:0000805,1.65e-12,2;CL:0002425,1.65e-12,2;CL:0000785,3.24e-12,2;CL:0000955,3.24e-12,2;CL:0000818,3.24e-12,2;CL:0000954,3.24e-12,2;CL:0000816,3.24e-12,2;CL:0000775,1.30e-08,3;CL:0000817,1.40e-08,3;CL:0000738,9.19e-08,136;CL:0002087,7.49e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002425;1.65e-12;2!CL:0000954;3.06e-12;2 | |||
|ontology_enrichment_disease=DOID:0060058!4.52e-28!10;DOID:2531!3.50e-21!51;DOID:0060083!3.50e-21!51;DOID:1240!1.82e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.07e-23;1!DOID:74;1.48e-12;2!DOID:1287;6.50e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.07e-23,1;DOID:74,1.48e-12,2;DOID:1287,6.50e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.09e-07;15!UBERON:0000179;9.09e-07;15!UBERON:0000463;9.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.87e-07,4;UBERON:0005058,6.87e-07,4;UBERON:0009113,6.87e-07,4;UBERON:0003295,6.87e-07,4;UBERON:0005562,6.87e-07,4;UBERON:0000178,9.09e-07,15;UBERON:0000179,9.09e-07,15;UBERON:0000463,9.09e-07,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59805579543034,2.13461532569859,2.51874500203774,0,0.383829398097213,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.853460445133014,0.800791974072025,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36255431980582,0,0,0,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0.324621940274555,0,0.228234679033192,0.47003968731907,0,0,0,0,0.425846237690326,0,0,0.447352215784832,0.333698283423817,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738508832766417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0.91227394607833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58843991634178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988058159489721,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.19998739585493,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:106415317..106415347,- | |short_description=p@chr2:106415317..106415347,- | ||
}} | }} |
Latest revision as of 23:01, 28 July 2015
Short description: | p@chr2:106415317..106415347, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:106415317..106415347, - |
Coexpression cluster: | C1070_hereditary_B_non_plasma_b_splenic_NK |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 6.87e-07 | 4 |
hemolymphoid system gland | 6.87e-07 | 4 |
thymic region | 6.87e-07 | 4 |
pharyngeal gland | 6.87e-07 | 4 |
thymus primordium | 6.87e-07 | 4 |
blood | 9.09e-07 | 15 |
haemolymphatic fluid | 9.09e-07 | 15 |
organism substance | 9.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.07e-23 | 1 |
hematopoietic system disease | 1.48e-12 | 2 |
cardiovascular system disease | 6.50e-07 | 4 |