FFCP PHASE1:Hg19::chr18:28622813..28622824,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1825 | |EntrezGene=1825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3037 | |HGNC=3037 | ||
|TSSclassifier=strong | |||
|UniProt=Q14574 | |UniProt=Q14574 | ||
|association_with_transcript=-32bp_to_ENST00000360428,ENST00000434452,NM_001941,NM_024423,uc002kwi.3,uc002kwj.3_5end | |association_with_transcript=-32bp_to_ENST00000360428,ENST00000434452,NM_001941,NM_024423,uc002kwi.3,uc002kwj.3_5end | ||
|cluster_id=chr18:28622813..28622824,- | |||
|description=CAGE_peak_6_at_DSC3_5end | |description=CAGE_peak_6_at_DSC3_5end | ||
|id=chr18:28622813..28622824,- | |id=chr18:28622813..28622824,- | ||
|ontology_enrichment_celltype=CL:0002076!1.67e-14!43;CL:0000066!6.04e-14!254;CL:0000223!5.32e-11!59;CL:0002251!4.88e-10!21;CL:0000076!1.75e-09!62;CL:0000622!3.27e-08!5 | |ontology_enrichment_celltype=CL:0002076!1.67e-14!43;CL:0000066!6.04e-14!254;CL:0000223!5.32e-11!59;CL:0002251!4.88e-10!21;CL:0000076!1.75e-09!62;CL:0000622!3.27e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.56e-16;42!CL:0000349;6.20e-14;19!CL:0002368;1.58e-12;13!CL:0002623;4.17e-12;3!CL:0000622;5.15e-12;5!CL:0002159;1.87e-11;14!CL:0002621;4.20e-11;3!CL:0002577;5.27e-11;3!CL:0000307;8.70e-11;3!CL:0002251;2.54e-10;20!CL:0000154;5.14e-10;6!CL:0000150;8.30e-10;9!CL:0000244;1.91e-08;4!CL:0000731;1.91e-08;4!CL:0000575;7.50e-08;2!CL:0002588;1.55e-07;2!CL:0002537;1.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.79e-20,42;CL:0000349,4.94e-14,19;CL:0000223,1.56e-13,58;CL:0000066,1.19e-12,253;CL:0002368,1.49e-12,13;CL:0000622,5.39e-12,5;CL:0002623,5.60e-12,3;CL:0002159,1.64e-11,14;CL:0002577,5.47e-11,3;CL:0002621,6.29e-11,3;CL:0000068,7.73e-11,3;CL:0000069,7.73e-11,3;CL:0000307,7.73e-11,3;CL:0000377,7.73e-11,3;CL:0002251,3.70e-10,20;CL:0000154,5.34e-10,6;CL:0000150,1.02e-09,9;CL:0000244,1.71e-08,4;CL:0000731,1.71e-08,4;CL:0000575,7.01e-08,2;CL:0002588,1.26e-07,2;CL:0002537,1.83e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000377;8.70e-11;3!CL:0000223;3.56e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!2.95e-09!14 | |ontology_enrichment_disease=DOID:1749!2.95e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.37e-15!169;UBERON:0000925!2.37e-15!169;UBERON:0006595!2.37e-15!169;UBERON:0005631!7.37e-14!14;UBERON:0000158!7.37e-14!14;UBERON:0000161!5.38e-12!35;UBERON:0001004!6.72e-11!72;UBERON:0000166!1.00e-10!21;UBERON:0000478!1.53e-10!24;UBERON:0003124!4.25e-10!7;UBERON:0001444!1.25e-08!48;UBERON:0000165!2.00e-08!28;UBERON:0000930!2.00e-08!28;UBERON:0005910!2.48e-08!6;UBERON:0001007!9.15e-08!155;UBERON:0001555!9.15e-08!155;UBERON:0007026!9.15e-08!155;UBERON:0004923!1.10e-07!57;UBERON:0000365!2.34e-07!5;UBERON:0006562!6.44e-07!11;UBERON:0000065!7.86e-07!53;UBERON:0000064!9.60e-07!219 | |ontology_enrichment_uberon=UBERON:0004119!2.37e-15!169;UBERON:0000925!2.37e-15!169;UBERON:0006595!2.37e-15!169;UBERON:0005631!7.37e-14!14;UBERON:0000158!7.37e-14!14;UBERON:0000161!5.38e-12!35;UBERON:0001004!6.72e-11!72;UBERON:0000166!1.00e-10!21;UBERON:0000478!1.53e-10!24;UBERON:0003124!4.25e-10!7;UBERON:0001444!1.25e-08!48;UBERON:0000165!2.00e-08!28;UBERON:0000930!2.00e-08!28;UBERON:0005910!2.48e-08!6;UBERON:0001007!9.15e-08!155;UBERON:0001555!9.15e-08!155;UBERON:0007026!9.15e-08!155;UBERON:0004923!1.10e-07!57;UBERON:0000365!2.34e-07!5;UBERON:0006562!6.44e-07!11;UBERON:0000065!7.86e-07!53;UBERON:0000064!9.60e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;2.18e-13;28!UBERON:0000478;3.39e-13;24!UBERON:0005631;5.59e-13;10!UBERON:0000158;5.59e-13;10!UBERON:0001949;4.20e-11;3!UBERON:0000161;8.11e-11;19!UBERON:0000166;8.11e-11;19!UBERON:0000486;6.38e-10;12!UBERON:0000305;8.02e-09;7!UBERON:0001987;2.32e-08;4!UBERON:0000033;4.64e-07;50!UBERON:0000365;7.82e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.12e-19,14;UBERON:0000158,1.12e-19,14;UBERON:0000166,3.24e-14,22;UBERON:0000478,2.88e-13,24;UBERON:0000165,1.19e-12,29;UBERON:0000930,1.19e-12,29;UBERON:0003124,1.28e-12,7;UBERON:0000033,2.47e-12,56;UBERON:0003102,8.82e-12,99;UBERON:0000161,1.44e-11,36;UBERON:0001444,6.24e-11,49;UBERON:0001949,6.29e-11,3;UBERON:0000153,8.87e-11,62;UBERON:0007811,8.87e-11,62;UBERON:0001004,9.83e-10,74;UBERON:0004119,2.62e-09,160;UBERON:0000925,2.62e-09,160;UBERON:0006595,2.62e-09,160;UBERON:0000305,6.84e-09,7;UBERON:0004923,1.18e-08,66;UBERON:0001987,2.39e-08,4;UBERON:0004340,2.39e-08,4;UBERON:0004871,8.95e-08,8;UBERON:0000365,7.15e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.83973783769224,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0,1.09288586487763,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,1.12135520028461,1.06748995729705,0,0.933633106199299,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.907457465280168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,2.18196896472668,2.29443676311203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,3.07300799144152,0,2.6137532827024,4.35165692245089,0,0,0,0,1.76113041353732,0,0,0,0,0,0,0,0,0,2.51973192298289,2.1266264586358,2.50763863567975,1.45316969256981,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,1.66435439510497,3.0239029332968,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,3.00759705454927,1.38121483403844,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.984043937099117,0,0.206082023295445,0,0,1.72279661398852,0.650060246036521,0,0.096670718292122,0,0,0.275673144969061,0.107420244868274,0,0,0.0890320356467374,3.30569830721956,2.11409074101617,3.1903178123646,2.52894452138875,0,0,0,0,0,0,0,0,0,0,0.571890581771475,0.255897791311334,0,0,0,0.539617372749944,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.563391205064483,1.14729081763241,1.96498082026242,0,0,0,0,0,0,1.92444225451024,1.34060455107157,2.17781969722645,0.0941438007767792,1.29151611801369,1.68471475667626,0.886860307073351,5.28363820476007,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,10.7435018131961,2.37571744666111,9.52198176507619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,1.137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,5.71637351542273,0.615602068030377,0,0,0.179515288819544,0,3.19001159731919,0.183195186803725,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.414752765588989,0,0,0,0,0,0,0.173559738335131,1.27390116638691,0.522355239482415,0,0.51595809741485,0,0,0,3.68558262655994,0,0.451961481561065,0,0,0,0,0,0,0,0,0.80175617316141,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.335917362433631,0,0,0,0.0824158583811665,0,0.295282444544246,0,0,0,0.160753148465019,0,0,0,3.0952078182318,0,2.34804281319486,0,0,0.633602019116439,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0.53168342911599,0.521745061811734,0.751288044986092,0.380805212168795,0.813741466409323,0,0.537052785212442,0,0.398095888698616,0,0,0,0,0,1.07220795687463,0.260994291965212,0.453411851024545,0,0,0,0,1.53498834705095,0.353378291891762,0.192914038270915,0,0,0.690860683462397,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,2.65771064666944,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0.11796972334774,0.183428598521679,0.693153996902029,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.709618961301111,0,0,0,0,0.118193840883968,0.333694205676207,0.235479278551542,0,0.560544326627578,0.913158720509496,0,0,0,0,0,0,0,2.07216164163037,4.95083583572455,6.91259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,1.94284397223656,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.248298857183432,0.784923038064294,0,0,3.26575121845442,2.39563310759697,2.02056159043763,0.573777643141411,0,0.162806537221949,0.533636729388577,0,0,2.34640942403454,0,0,0,0.402547587182052,0 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| ||
|short_description=p6@DSC3 | |short_description=p6@DSC3 | ||
}} | }} |
Latest revision as of 04:28, 19 September 2015
Short description: | p6@DSC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DSC3_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_ENST00000360428, ENST00000434452, NM_001941, NM_024423, uc002kwi.3, uc002kwj.3_5end |
EntrezGene: | DSC3 |
HGNC: | 3037 |
UniProt: | Q14574 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.79e-20 | 42 |
extraembryonic cell | 4.94e-14 | 19 |
endodermal cell | 1.56e-13 | 58 |
epithelial cell | 1.19e-12 | 253 |
respiratory epithelial cell | 1.49e-12 | 13 |
acinar cell | 5.39e-12 | 5 |
acinar cell of salivary gland | 5.60e-12 | 3 |
general ecto-epithelial cell | 1.64e-11 | 14 |
placental epithelial cell | 5.47e-11 | 3 |
gingival epithelial cell | 6.29e-11 | 3 |
duct epithelial cell | 7.73e-11 | 3 |
branched duct epithelial cell | 7.73e-11 | 3 |
tracheal epithelial cell | 7.73e-11 | 3 |
tracheoblast | 7.73e-11 | 3 |
epithelial cell of alimentary canal | 3.70e-10 | 20 |
protein secreting cell | 5.34e-10 | 6 |
glandular epithelial cell | 1.02e-09 | 9 |
transitional epithelial cell | 1.71e-08 | 4 |
urothelial cell | 1.71e-08 | 4 |
corneal epithelial cell | 7.01e-08 | 2 |
smooth muscle cell of the umbilical vein | 1.26e-07 | 2 |
amnion mesenchymal stem cell | 1.83e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.12e-19 | 14 |
membranous layer | 1.12e-19 | 14 |
oral opening | 3.24e-14 | 22 |
extraembryonic structure | 2.88e-13 | 24 |
mouth | 1.19e-12 | 29 |
stomodeum | 1.19e-12 | 29 |
chorion | 1.28e-12 | 7 |
head | 2.47e-12 | 56 |
surface structure | 8.82e-12 | 99 |
orifice | 1.44e-11 | 36 |
subdivision of head | 6.24e-11 | 49 |
gingival epithelium | 6.29e-11 | 3 |
anterior region of body | 8.87e-11 | 62 |
craniocervical region | 8.87e-11 | 62 |
respiratory system | 9.83e-10 | 74 |
endoderm-derived structure | 2.62e-09 | 160 |
endoderm | 2.62e-09 | 160 |
presumptive endoderm | 2.62e-09 | 160 |
amnion | 6.84e-09 | 7 |
organ component layer | 1.18e-08 | 66 |
placenta | 2.39e-08 | 4 |
allantois | 2.39e-08 | 4 |
somatic layer of lateral plate mesoderm | 8.95e-08 | 8 |
urothelium | 7.15e-07 | 5 |