FFCP PHASE1:Hg19::chr12:113590909..113590922,+: Difference between revisions
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|id=chr12:113590909..113590922,+
|short_description=p4@CCDC42B
|description=CAGE_peak_4_at_CCDC42B_5end
|association_with_transcript=108bp_to_ENST00000551256_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=387885 | |EntrezGene=387885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37100 | |HGNC=37100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=108bp_to_ENST00000551256_5end | |||
|cluster_id=chr12:113590909..113590922,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_4_at_CCDC42B_5end | |||
|id=chr12:113590909..113590922,+ | |||
|ontology_enrichment_celltype=CL:0001014!9.63e-11!2;CL:0001016!9.63e-11!2;CL:0000453!5.71e-09!5;CL:0000990!2.66e-08!8;CL:0000840!1.51e-07!5;CL:0001029!1.51e-07!5;CL:0000174!4.88e-07!3;CL:0002603!8.06e-07!3;CL:0000451!8.55e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.68e-99;2!CL:0001016;5.68e-99;2!CL:0000785;3.99e-50;1!CL:0000819;3.99e-50;1!CL:0000453;1.81e-40;5!CL:0000840;5.98e-34;5!CL:0000990;4.59e-23;8!CL:0000451;4.28e-19;10!CL:0002178;1.12e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.68e-99,2;CL:0001016,5.68e-99,2;CL:0000819,3.99e-50,1;CL:0000453,1.81e-40,5;CL:0000840,5.98e-34,5;CL:0001029,5.98e-34,5;CL:0000785,7.14e-26,2;CL:0000955,7.14e-26,2;CL:0000818,7.14e-26,2;CL:0000954,7.14e-26,2;CL:0000816,7.14e-26,2;CL:0000990,4.59e-23,8;CL:0000451,4.28e-19,10;CL:0000817,9.46e-18,3;CL:0002178,1.12e-17,3 | |||
|ontology_enrichment_development_v019=CL:0000954;7.14e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.99e-50;1!DOID:8675;3.99e-50;1!DOID:3493;9.18e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.99e-50,1;DOID:8675,3.99e-50,1;DOID:3493,9.18e-26,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;3.60e-11;5!UBERON:0010039;3.60e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8 | |||
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| ||
|short_description=p4@CCDC42B | |||
}} | }} |
Latest revision as of 12:11, 16 September 2015
Short description: | p4@CCDC42B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC42B_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 108bp_to_ENST00000551256_5end |
EntrezGene: | CCDC42B |
HGNC: | 37100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.68e-99 | 2 |
immature CD1a-positive Langerhans cell | 5.68e-99 | 2 |
B-1 B cell | 3.99e-50 | 1 |
Langerhans cell | 1.81e-40 | 5 |
immature conventional dendritic cell | 5.98e-34 | 5 |
common dendritic progenitor | 5.98e-34 | 5 |
mature B cell | 7.14e-26 | 2 |
pre-B-II cell | 7.14e-26 | 2 |
transitional stage B cell | 7.14e-26 | 2 |
small pre-B-II cell | 7.14e-26 | 2 |
immature B cell | 7.14e-26 | 2 |
conventional dendritic cell | 4.59e-23 | 8 |
dendritic cell | 4.28e-19 | 10 |
precursor B cell | 9.46e-18 | 3 |
epithelial cell of stomach | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.80e-07 | 8 |
food storage organ | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.99e-50 | 1 |
lymphosarcoma | 3.99e-50 | 1 |
signet ring cell adenocarcinoma | 9.18e-26 | 2 |