FFCP PHASE1:Hg19::chr2:43019861..43019878,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:43019861..43019878,+ | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_at_chr2:43019861..43019878,+ | |description=CAGE_peak_at_chr2:43019861..43019878,+ | ||
|id=chr2:43019861..43019878,+ | |id=chr2:43019861..43019878,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.95e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.26e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.36e-18;31!UBERON:0004161;3.41e-15;11!UBERON:0009497;1.31e-12;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.89e-21!115;UBERON:0000059!1.22e-09!11;UBERON:0000160!5.62e-09!27;UBERON:0005409!7.92e-09!35;UBERON:0001155!8.43e-08!9;UBERON:0004921!7.12e-07!129;UBERON:0004185!7.12e-07!129;UBERON:0000922!8.43e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.93e-19;17!UBERON:0005409;5.59e-17;22!UBERON:0000059;4.08e-14;11!UBERON:0002107;3.32e-13;19!UBERON:0006925;3.32e-13;19!UBERON:0002423;2.45e-11;25!UBERON:0004921;7.30e-10;33!UBERON:0001155;7.41e-10;9!UBERON:0004907;5.79e-09;5!UBERON:0001007;2.19e-07;81!UBERON:0002365;4.46e-07;31!UBERON:0002330;4.46e-07;31!UBERON:0001052;8.05e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.15e-19,17;UBERON:0005409,9.25e-15,25;UBERON:0000059,2.88e-14,11;UBERON:0002107,3.52e-13,19;UBERON:0006925,3.52e-13,19;UBERON:0008836,3.52e-13,19;UBERON:0009854,1.19e-12,23;UBERON:0009497,2.24e-11,25;UBERON:0000015,2.24e-11,25;UBERON:0002423,2.24e-11,25;UBERON:0006235,2.24e-11,25;UBERON:0004161,2.24e-11,25;UBERON:0008835,4.60e-11,22;UBERON:0003894,4.60e-11,22;UBERON:0009856,6.92e-11,26;UBERON:0004921,2.43e-10,118;UBERON:0001155,5.68e-10,9;UBERON:0007499,1.84e-09,25;UBERON:0004907,5.13e-09,5;UBERON:0003929,5.06e-08,54;UBERON:0005172,5.99e-08,54;UBERON:0005173,5.99e-08,54;UBERON:0001007,7.19e-08,145;UBERON:0001555,7.19e-08,145;UBERON:0007026,7.19e-08,145;UBERON:0002365,3.34e-07,31;UBERON:0002330,3.34e-07,31;UBERON:0004119,4.08e-07,160;UBERON:0000925,4.08e-07,160;UBERON:0006595,4.08e-07,160;UBERON:0001052,7.53e-07,4;UBERON:0002417,8.40e-07,60;UBERON:0000916,8.40e-07,60 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,0.492484232307152,0.408001382488506,0,0,0,0.125542639594803,4.20273731613732,4.02292888304734,3.7781175030566,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.632924774881769,1.26753171787165,0.212604299965044,1.46761051855863,1.46027220490444,1.65194582125657,0.48217676009124,0.570025487482497,0.39783335439818,0.365328307529268,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,7.53129684111848,0,0,1.62273696827342,0.870648686496336,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0.121973706129595,0.662648841607426,0.69716365721711,0.725627385107593,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6185573125845,14.7424082501644,11.8157981336281,0,40.3402078421412,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0.968532774145487,1.24396869324463,2.30591925467138,1.76739406796932,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0.414415513436035,0.24538298343828,1.00034104211935,0,0,0,0,0,0,2.27407504055985,0,0,0,0.0868836144680828,0.195801157462741,0.343143423810856,0,0.431428401637234,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,24.2927493679161,0,0,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0,0,0.219259876645935,0,0.256450125116389,0,0,16.8987259102265,0,0,0,0,0,0.386682873168488,0.154048617114644,0.460511024178389,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,1.43897966066652,0.54907405947211,0.235624804691373,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,1.39973888097993,0,0,0,18.4521849522487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0.422250816255987,3.18796781201712,2.76283915531148,0,0,3.44637455290994,0,0,0,0,0.591860433821602,0,0,2.90799823828566,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,1.07730361905316,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,8.76389042890433,0.216388639742091,1.99052386215701,8.22655349881054,3.66618086960175,0,0,0,0.539209063845416,3.21031058919516,0.937057782901357,0,0,0,0.394584402849391,13.308978765353,0,2.0851571277401,0.751617097072463,0.311064574191741,0,0,0,0,0,0,0,0,0,5.06707337901887,1.71986032471617,0,0,0,0.387956065953678,0,2.71176888936639,0,0,0.253243183823515,0,0,1.92107695265417,0,0,0,3.94668495082519,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,2.06244381610515,0.717873024576814,0,0,0.446342914883745,0.604651252380536,0,15.144473438569,34.5858170328712,36.5926411212379,39.0940554354272,1.27955725969173,0,0,0,1.60753148465019,0.275078873194468,0.415440338029185,0,0,0.121499113316049,0,8.11698785181741,8.81237080667968,0,0,0.383830394638891,0.714695326373367,1.32418394073086,0,0,0,0,0,0.082092520749339,0,0,19.637999312863,21.2011022259554,0.387848869084652,0.13223260174269,0,0,0.747511887973863,0.314408610199332,1.24271716604159,0.992332043623902,0,0.121792598380896,0,1.63205341010842,0.2506898940227,0.612691153526923,0.655745261419609,0,0,0,0,0.573409195690071,0.554645257684261,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.999936979274649,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0.397832444232549,1.88025820873143,0,3.90757005616546,0,0,0.295712172434091,0.472763092328763,0,0,0.126831620387814,0,0.548257766857182,1.98484471355718,0.175871244359621,0.383287282918786,0.535701835878287,0,0,0,1.1531308121143,1.49804183822513,0,0.135939465953663,0.0657727735628491,0,0,1.64835494986079,0.471346769748006,3.92381028639305,9.13158720509496,0,0.9555033757741,6.93322478513567,0,0,0,0,0,0,0,0.430227358820278,0.236664001461131,0.34085361903663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| ||
|short_description=p@chr2:43019861..43019878,+ | |short_description=p@chr2:43019861..43019878,+ | ||
}} | }} |
Latest revision as of 10:13, 29 July 2015
Short description: | p@chr2:43019861..43019878, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:43019861..43019878, + |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.26e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.15e-19 | 17 |
gastrointestinal system | 9.25e-15 | 25 |
large intestine | 2.88e-14 | 11 |
liver | 3.52e-13 | 19 |
digestive gland | 3.52e-13 | 19 |
liver bud | 3.52e-13 | 19 |
digestive tract diverticulum | 1.19e-12 | 23 |
epithelium of foregut-midgut junction | 2.24e-11 | 25 |
anatomical boundary | 2.24e-11 | 25 |
hepatobiliary system | 2.24e-11 | 25 |
foregut-midgut junction | 2.24e-11 | 25 |
septum transversum | 2.24e-11 | 25 |
hepatic diverticulum | 4.60e-11 | 22 |
liver primordium | 4.60e-11 | 22 |
sac | 6.92e-11 | 26 |
subdivision of digestive tract | 2.43e-10 | 118 |
colon | 5.68e-10 | 9 |
epithelial sac | 1.84e-09 | 25 |
lower digestive tract | 5.13e-09 | 5 |
gut epithelium | 5.06e-08 | 54 |
abdomen element | 5.99e-08 | 54 |
abdominal segment element | 5.99e-08 | 54 |
digestive system | 7.19e-08 | 145 |
digestive tract | 7.19e-08 | 145 |
primitive gut | 7.19e-08 | 145 |
exocrine gland | 3.34e-07 | 31 |
exocrine system | 3.34e-07 | 31 |
endoderm-derived structure | 4.08e-07 | 160 |
endoderm | 4.08e-07 | 160 |
presumptive endoderm | 4.08e-07 | 160 |
rectum | 7.53e-07 | 4 |
abdominal segment of trunk | 8.40e-07 | 60 |
abdomen | 8.40e-07 | 60 |