FFCP PHASE1:Hg19::chr2:55831402..55831405,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57223 | |EntrezGene=57223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29267 | |HGNC=29267 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-190bp_to_uc002rza.2_5end | |association_with_transcript=-190bp_to_uc002rza.2_5end | ||
|cluster_id=chr2:55831402..55831405,- | |||
|coexpression_cluster_id=C679 | |||
|description=CAGE_peak_19_at_SMEK2_5end | |description=CAGE_peak_19_at_SMEK2_5end | ||
|id=chr2:55831402..55831405,- | |id=chr2:55831402..55831405,- | ||
|ontology_enrichment_celltype=CL:0002195!1.57e-37!2;CL:0002571!1.57e-37!2;CL:0002549!2.72e-10!2;CL:1000487!3.27e-10!2;CL:0000135!2.32e-07!3;CL:0000386!2.32e-07!3;CL:0000388!2.32e-07!3;CL:0002564!2.63e-07!3 | |ontology_enrichment_celltype=CL:0002195!1.57e-37!2;CL:0002571!1.57e-37!2;CL:0002549!2.72e-10!2;CL:1000487!3.27e-10!2;CL:0000135!2.32e-07!3;CL:0000386!2.32e-07!3;CL:0000388!2.32e-07!3;CL:0002564!2.63e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002195;2.74e-50;2!CL:0002571;2.74e-50;2!CL:0002552;5.15e-21;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.74e-50,2;CL:0002571,2.74e-50,2;CL:0002552,5.15e-21,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003947!2.72e-10!2;UBERON:0005629!2.72e-10!2;UBERON:0005358!2.72e-10!2;UBERON:0001886!2.72e-10!2;UBERON:0004086!2.72e-10!2;UBERON:0005282!2.72e-10!2;UBERON:0005281!2.72e-10!2;UBERON:0000043!2.32e-07!3;UBERON:0002242!2.63e-07!3;UBERON:0003068!2.63e-07!3;UBERON:0002328!2.63e-07!3;UBERON:0004880!2.63e-07!3;UBERON:0002300!2.79e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001828;1.07e-13;8!UBERON:0003729;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,1.07e-13,8;UBERON:0003729,5.70e-09,13 | |||
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|short_description=p19@SMEK2 | |short_description=p19@SMEK2 | ||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p19@SMEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SMEK2_5end |
Coexpression cluster: | C679_Mesenchymal_Smooth_Cardiac_Hair_Fibroblast_Mesothelial_Skeletal |
Association with transcript: | -190bp_to_uc002rza.2_5end |
EntrezGene: | SMEK2 |
HGNC: | 29267 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.74e-50 | 2 |
hepatic mesenchymal stem cell | 2.74e-50 | 2 |
fibroblast of gingiva | 5.15e-21 | 5 |
Ontology term | p-value | n |
---|---|---|
gingiva | 1.07e-13 | 8 |
mouth mucosa | 5.70e-09 | 13 |