FFCP PHASE1:Hg19::chr12:121099016..121099027,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:121099016..121099027,+
|short_description=p@chr12:121099016..121099027,+
|description=CAGE_peak_at_chr12:121099016..121099027,+
|association_with_transcri...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:121099016..121099027,+ | |||
|coexpression_cluster_id=C100 | |||
|description=CAGE_peak_at_chr12:121099016..121099027,+ | |||
|id=chr12:121099016..121099027,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!8.96e-54!20;UBERON:0002619!8.25e-49!22;UBERON:0001869!5.98e-48!32;UBERON:0001893!5.62e-45!34;UBERON:0000956!8.56e-43!25;UBERON:0000203!8.56e-43!25;UBERON:0002780!2.61e-41!41;UBERON:0001890!2.61e-41!41;UBERON:0006240!2.61e-41!41;UBERON:0002791!3.26e-41!33;UBERON:0003080!3.00e-40!42;UBERON:0002020!6.33e-40!34;UBERON:0003528!6.33e-40!34;UBERON:0001049!4.74e-32!57;UBERON:0005068!4.74e-32!57;UBERON:0006241!4.74e-32!57;UBERON:0007135!4.74e-32!57;UBERON:0000200!9.23e-32!6;UBERON:0000955!4.92e-31!69;UBERON:0006238!4.92e-31!69;UBERON:0002616!7.87e-31!59;UBERON:0001017!1.27e-30!82;UBERON:0005743!5.50e-29!86;UBERON:0003056!1.38e-26!61;UBERON:0000073!8.45e-26!94;UBERON:0001016!8.45e-26!94;UBERON:0003075!5.26e-22!86;UBERON:0007284!5.26e-22!86;UBERON:0007023!5.27e-21!115;UBERON:0002346!7.89e-21!90;UBERON:0002771!3.08e-17!3;UBERON:0001872!3.34e-17!5;UBERON:0000033!4.09e-17!123;UBERON:0001871!9.82e-17!7;UBERON:0000153!4.27e-16!129;UBERON:0007811!4.27e-16!129;UBERON:0004121!7.81e-15!169;UBERON:0000924!2.28e-14!173;UBERON:0006601!2.28e-14!173;UBERON:0001870!7.93e-12!2;UBERON:0002021!4.67e-10!5;UBERON:0000025!3.39e-08!194;UBERON:0002702!6.59e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;2.18e-38;6!UBERON:0002771;5.96e-34;2!UBERON:0001876;5.96e-34;2!UBERON:0000349;1.71e-14;5!UBERON:0001950;1.16e-13;20!UBERON:0002619;1.41e-12;22!UBERON:0000200;2.59e-12;6!UBERON:0000956;2.91e-11;25!UBERON:0000203;2.91e-11;25!UBERON:0001893;2.91e-09;34!UBERON:0003528;5.16e-09;34!UBERON:0002791;5.16e-09;32!UBERON:0002020;5.16e-09;34!UBERON:0001869;5.16e-09;32!UBERON:0002420;1.16e-08;9!UBERON:0007245;1.16e-08;9!UBERON:0010009;1.16e-08;9!UBERON:0010011;1.16e-08;9!UBERON:0000454;1.16e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,2.18e-38,6;UBERON:0001876,5.04e-34,2;UBERON:0002771,7.05e-34,2;UBERON:0000349,1.60e-14,5;UBERON:0001950,1.16e-13,20;UBERON:0002619,1.41e-12,22;UBERON:0000200,2.74e-12,6;UBERON:0000956,2.91e-11,25;UBERON:0000203,2.91e-11,25;UBERON:0002791,4.11e-09,32;UBERON:0001869,4.11e-09,32;UBERON:0002420,1.12e-08,9;UBERON:0007245,1.12e-08,9;UBERON:0010009,1.12e-08,9;UBERON:0010011,1.12e-08,9;UBERON:0000454,1.12e-08,9;UBERON:0003528,1.18e-08,34;UBERON:0002020,1.18e-08,34;UBERON:0001893,1.18e-08,34;UBERON:0002780,2.17e-07,41;UBERON:0001890,2.17e-07,41;UBERON:0003080,2.17e-07,41;UBERON:0006240,2.17e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.22026264901963,0.625954653532499,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.478901577171454,0.41023272848151,0,0.138314504928436,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.507326481551255,0,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,7.67193407429627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.364497339948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.22026264901963,0.625954653532499,0,0,0,0.138348634936231,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.478901577171454,0.41023272848151,0,0.138314504928436,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.507326481551255,0,0,0,0,0,0,0.672567444437648,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,7.67193407429627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,0.227336094654718,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:121099016..121099027,+ | |||
}} | }} |
Latest revision as of 05:49, 24 July 2015
Short description: | p@chr12:121099016..121099027, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:121099016..121099027, + |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 2.18e-38 | 6 |
amygdala | 5.04e-34 | 2 |
middle temporal gyrus | 7.05e-34 | 2 |
limbic system | 1.60e-14 | 5 |
neocortex | 1.16e-13 | 20 |
regional part of cerebral cortex | 1.41e-12 | 22 |
gyrus | 2.74e-12 | 6 |
cerebral cortex | 2.91e-11 | 25 |
pallium | 2.91e-11 | 25 |
regional part of telencephalon | 4.11e-09 | 32 |
cerebral hemisphere | 4.11e-09 | 32 |
basal ganglion | 1.12e-08 | 9 |
nuclear complex of neuraxis | 1.12e-08 | 9 |
aggregate regional part of brain | 1.12e-08 | 9 |
collection of basal ganglia | 1.12e-08 | 9 |
cerebral subcortex | 1.12e-08 | 9 |
brain grey matter | 1.18e-08 | 34 |
gray matter | 1.18e-08 | 34 |
telencephalon | 1.18e-08 | 34 |
regional part of forebrain | 2.17e-07 | 41 |
forebrain | 2.17e-07 | 41 |
anterior neural tube | 2.17e-07 | 41 |
future forebrain | 2.17e-07 | 41 |