FFCP PHASE1:Hg19::chr19:23015117..23015128,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:23015117..23015128,+ | |||
|coexpression_cluster_id=C277 | |||
|description=CAGE_peak_at_chr19:23015117..23015128,+ | |description=CAGE_peak_at_chr19:23015117..23015128,+ | ||
|id=chr19:23015117..23015128,+ | |id=chr19:23015117..23015128,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.61e-25!7;CL:0000586!1.61e-25!7;CL:0002178!6.22e-10!3;CL:0002573!1.02e-09!2 | |ontology_enrichment_celltype=CL:0000039!1.61e-25!7;CL:0000586!1.61e-25!7;CL:0002178!6.22e-10!3;CL:0002573!1.02e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.19e-50;7!CL:0000586;2.19e-50;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.19e-50,7;CL:0000586,2.19e-50,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.05e-54;10!UBERON:0005564;1.05e-54;10 | |||
|ontology_enrichment_disease=DOID:6193!1.63e-08!1;DOID:0060085!2.89e-08!1;DOID:3165!2.89e-08!1;DOID:0060121!2.89e-08!1;DOID:2438!2.89e-08!1;DOID:4418!2.89e-08!1;DOID:4960!3.33e-08!1;DOID:0070004!3.33e-08!1;DOID:3095!5.53e-08!22;DOID:2994!5.53e-08!22;DOID:14566!1.21e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:6193;4.59e-23;1!DOID:3095;1.99e-16;22!DOID:2994;1.99e-16;22!DOID:3350;3.06e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.13e-23,1;DOID:3095,1.99e-16,22;DOID:2994,1.99e-16,22;DOID:3350,3.24e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.98e-32!8;UBERON:0003135!4.56e-23!11;UBERON:0000991!7.72e-12!21;UBERON:0009196!7.72e-12!21;UBERON:0009117!7.72e-12!21;UBERON:0005564!7.72e-12!21;UBERON:0004176!2.82e-11!22;UBERON:0003101!2.82e-11!22;UBERON:0000079!2.82e-11!22;UBERON:0002363!5.43e-08!1;UBERON:0007647!5.43e-08!1;UBERON:0010115!5.43e-08!1;UBERON:0002022!5.82e-08!1;UBERON:0001282!6.68e-08!1;UBERON:0009842!6.68e-08!1;UBERON:0003704!6.68e-08!1;UBERON:0001171!6.68e-08!1;UBERON:0001172!6.68e-08!1 | |ontology_enrichment_uberon=UBERON:0000473!6.98e-32!8;UBERON:0003135!4.56e-23!11;UBERON:0000991!7.72e-12!21;UBERON:0009196!7.72e-12!21;UBERON:0009117!7.72e-12!21;UBERON:0005564!7.72e-12!21;UBERON:0004176!2.82e-11!22;UBERON:0003101!2.82e-11!22;UBERON:0000079!2.82e-11!22;UBERON:0002363!5.43e-08!1;UBERON:0007647!5.43e-08!1;UBERON:0010115!5.43e-08!1;UBERON:0002022!5.82e-08!1;UBERON:0001282!6.68e-08!1;UBERON:0009842!6.68e-08!1;UBERON:0003704!6.68e-08!1;UBERON:0001171!6.68e-08!1;UBERON:0001172!6.68e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.04e-68;8!UBERON:0003135;8.87e-50;11!UBERON:0000991;2.81e-26;21!UBERON:0003101;4.24e-25;22!UBERON:0000079;4.24e-25;22!UBERON:0002323;4.53e-10;45!UBERON:0003133;1.89e-09;44!UBERON:0002553;5.50e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.83e-68,8;UBERON:0003135,8.44e-50,11;UBERON:0000991,2.74e-26,21;UBERON:0009196,2.74e-26,21;UBERON:0009117,2.74e-26,21;UBERON:0005564,2.74e-26,21;UBERON:0004176,4.14e-25,22;UBERON:0003101,4.14e-25,22;UBERON:0000079,4.14e-25,22;UBERON:0002323,3.81e-12,46;UBERON:0003133,1.20e-11,48;UBERON:0004458,2.05e-11,49;UBERON:0003886,2.26e-10,54;UBERON:0005156,1.66e-09,59;UBERON:0000990,1.66e-09,59;UBERON:0002553,3.37e-09,61 | |||
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|short_description=p@chr19:23015117..23015128,+ | |short_description=p@chr19:23015117..23015128,+ | ||
}} | }} |
Latest revision as of 05:49, 26 July 2015
Short description: | p@chr19:23015117..23015128, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:23015117..23015128, + |
Coexpression cluster: | C277_mesothelioma_epithelioid_thyroid_extraskeletal_alveolar_glioblastoma_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.19e-50 | 7 |
germ cell | 2.19e-50 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 2.83e-68 | 8 |
male reproductive organ | 8.44e-50 | 11 |
gonad | 2.74e-26 | 21 |
indifferent external genitalia | 2.74e-26 | 21 |
indifferent gonad | 2.74e-26 | 21 |
gonad primordium | 2.74e-26 | 21 |
external genitalia | 4.14e-25 | 22 |
male organism | 4.14e-25 | 22 |
male reproductive system | 4.14e-25 | 22 |
body cavity | 3.81e-12 | 46 |
reproductive organ | 1.20e-11 | 48 |
body cavity or lining | 2.05e-11 | 49 |
body cavity precursor | 2.26e-10 | 54 |
reproductive structure | 1.66e-09 | 59 |
reproductive system | 1.66e-09 | 59 |
anatomical cavity | 3.37e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.13e-23 | 1 |
germ cell and embryonal cancer | 1.99e-16 | 22 |
germ cell cancer | 1.99e-16 | 22 |
mesenchymal cell neoplasm | 3.24e-12 | 2 |