FFCP PHASE1:Hg19::chr3:108672717..108672731,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9626 | |EntrezGene=9626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4680 | |HGNC=4680 | ||
|TSSclassifier=strong | |||
|UniProt=O95843 | |UniProt=O95843 | ||
|association_with_transcript=10bp_to_ENST00000261047_5end | |association_with_transcript=10bp_to_ENST00000261047_5end | ||
|cluster_id=chr3:108672717..108672731,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_GUCA1C_5end | |description=CAGE_peak_4_at_GUCA1C_5end | ||
|id=chr3:108672717..108672731,- | |id=chr3:108672717..108672731,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.54e-09;3!UBERON:0005062;1.80e-07;4!UBERON:0007284;1.80e-07;4 | |||
|ontology_enrichment_disease=DOID:114!5.41e-22!2;DOID:178!1.07e-11!1;DOID:326!1.07e-11!1;DOID:3978!1.07e-11!1;DOID:3394!1.07e-11!1;DOID:5844!1.07e-11!1;DOID:1287!1.73e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:114;1.21e-13;2!DOID:1287;1.80e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.21e-13,2;DOID:1287,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!8.70e-23!2;UBERON:0002757!8.70e-23!2;UBERON:0010134!8.70e-23!2;UBERON:0002784!8.70e-23!2;UBERON:0005408!8.70e-23!2;UBERON:0001899!8.70e-23!2;UBERON:0003978!3.46e-15!3;UBERON:0009751!3.46e-15!3;UBERON:0000946!3.46e-15!3;UBERON:0002523!3.46e-15!3;UBERON:0005983!3.46e-15!3;UBERON:0002165!3.46e-15!3;UBERON:0002062!3.46e-15!3;UBERON:0007280!3.46e-15!3;UBERON:0007023!1.51e-13!115;UBERON:0002146!4.06e-12!1;UBERON:0005623!4.06e-12!1;UBERON:0000996!5.62e-12!1;UBERON:0002135!6.26e-12!1;UBERON:0003296!6.98e-12!4;UBERON:0010133!6.98e-12!4;UBERON:0007029!7.76e-12!1;UBERON:0007100!1.09e-09!27;UBERON:0001894!3.72e-07!7;UBERON:0006222!3.72e-07!7;UBERON:0003075!8.10e-07!86;UBERON:0007284!8.10e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.82e-51;2!UBERON:0002757;8.82e-51;2!UBERON:0010134;8.82e-51;2!UBERON:0005408;8.82e-51;2!UBERON:0001899;8.82e-51;2!UBERON:0003296;5.23e-26;4!UBERON:0010133;5.23e-26;4!UBERON:0002784;5.23e-26;4!UBERON:0002146;7.62e-26;1!UBERON:0005623;7.62e-26;1!UBERON:0000996;1.26e-25;1!UBERON:0001894;2.47e-15;7!UBERON:0003978;1.54e-09;3!UBERON:0000946;1.54e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.82e-51,2;UBERON:0002757,8.82e-51,2;UBERON:0010134,8.82e-51,2;UBERON:0005408,8.82e-51,2;UBERON:0001899,8.82e-51,2;UBERON:0003296,5.23e-26,4;UBERON:0010133,5.23e-26,4;UBERON:0002784,5.23e-26,4;UBERON:0002146,5.93e-26,1;UBERON:0005623,5.93e-26,1;UBERON:0000996,1.26e-25,1;UBERON:0001894,2.47e-15,7;UBERON:0006222,2.47e-15,7;UBERON:0007023,1.17e-10,114;UBERON:0003978,1.41e-09,3;UBERON:0009751,1.41e-09,3;UBERON:0000946,1.41e-09,3;UBERON:0002523,1.41e-09,3;UBERON:0005983,1.41e-09,3;UBERON:0002165,1.41e-09,3;UBERON:0002062,1.41e-09,3;UBERON:0007280,1.41e-09,3 | |||
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|short_description=p4@GUCA1C | |short_description=p4@GUCA1C | ||
}} | }} |
Latest revision as of 11:41, 19 September 2015
Short description: | p4@GUCA1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GUCA1C_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 10bp_to_ENST00000261047_5end |
EntrezGene: | GUCA1C |
HGNC: | 4680 |
UniProt: | O95843 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 8.82e-51 | 2 |
regional part of epithalamus | 8.82e-51 | 2 |
secretory circumventricular organ | 8.82e-51 | 2 |
circumventricular organ | 8.82e-51 | 2 |
epithalamus | 8.82e-51 | 2 |
gland of diencephalon | 5.23e-26 | 4 |
neuroendocrine gland | 5.23e-26 | 4 |
regional part of diencephalon | 5.23e-26 | 4 |
pulmonary valve | 5.93e-26 | 1 |
semi-lunar valve | 5.93e-26 | 1 |
vagina | 1.26e-25 | 1 |
diencephalon | 2.47e-15 | 7 |
future diencephalon | 2.47e-15 | 7 |
adult organism | 1.17e-10 | 114 |
valve | 1.41e-09 | 3 |
cardiac mesenchyme | 1.41e-09 | 3 |
cardial valve | 1.41e-09 | 3 |
tunica intima | 1.41e-09 | 3 |
heart layer | 1.41e-09 | 3 |
endocardium | 1.41e-09 | 3 |
endocardial cushion | 1.41e-09 | 3 |
presumptive endocardium | 1.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.21e-13 | 2 |
cardiovascular system disease | 1.80e-07 | 4 |