FFCP PHASE1:Hg19::chr19:49128280..49128291,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56848 | |EntrezGene=56848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18859 | |HGNC=18859 | ||
|TSSclassifier=strong | |||
|UniProt=A0T4C8 | |UniProt=A0T4C8 | ||
|association_with_transcript=54bp_to_uc002pjw.2_5end | |association_with_transcript=54bp_to_uc002pjw.2_5end | ||
|cluster_id=chr19:49128280..49128291,+ | |||
|coexpression_cluster_id=C894 | |||
|description=CAGE_peak_9_at_SPHK2_5end | |description=CAGE_peak_9_at_SPHK2_5end | ||
|id=chr19:49128280..49128291,+ | |id=chr19:49128280..49128291,+ | ||
|ontology_enrichment_celltype=CL:0000181!7.14e-08!12;CL:0000417!7.14e-08!12;CL:0000668!7.14e-08!12;CL:0000414!7.14e-08!12;CL:0000412!7.14e-08!12;CL:0000182!7.14e-08!12 | |ontology_enrichment_celltype=CL:0000181!7.14e-08!12;CL:0000417!7.14e-08!12;CL:0000668!7.14e-08!12;CL:0000414!7.14e-08!12;CL:0000412!7.14e-08!12;CL:0000182!7.14e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.26e-13;4!CL:0002253;1.36e-07;2!CL:0002535;1.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.34e-13,4;CL:0002253,1.45e-07,2;CL:0002535,1.64e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!3.40e-12!14;DOID:3493!3.91e-08!2 | |ontology_enrichment_disease=DOID:3119!3.40e-12!14;DOID:3493!3.91e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.85e-15!35;UBERON:0000059!2.07e-12!11;UBERON:0000160!2.74e-12!27;UBERON:0001155!5.33e-11!9;UBERON:0004921!5.87e-11!129;UBERON:0004185!5.87e-11!129;UBERON:0001007!4.67e-10!155;UBERON:0001555!4.67e-10!155;UBERON:0007026!4.67e-10!155;UBERON:0009854!1.80e-09!23;UBERON:0002107!4.88e-09!19;UBERON:0006925!4.88e-09!19;UBERON:0008836!4.88e-09!19;UBERON:0004119!9.91e-09!169;UBERON:0000925!9.91e-09!169;UBERON:0006595!9.91e-09!169;UBERON:0009497!1.49e-08!25;UBERON:0000015!1.49e-08!25;UBERON:0002423!1.49e-08!25;UBERON:0006235!1.49e-08!25;UBERON:0004161!1.49e-08!25;UBERON:0009856!3.21e-08!26;UBERON:0003929!1.14e-07!54;UBERON:0008835!1.15e-07!22;UBERON:0003894!1.15e-07!22;UBERON:0004907!1.73e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.57e-43;17!UBERON:0005409;6.17e-34;22!UBERON:0002108;4.04e-23;4!UBERON:0001155;1.88e-22;9!UBERON:0004921;3.81e-21;33!UBERON:0000059;1.95e-18;11!UBERON:0001242;1.26e-13;4!UBERON:0001262;1.26e-13;4!UBERON:0004786;1.26e-13;4!UBERON:0004808;1.26e-13;4!UBERON:0001277;1.26e-13;4!UBERON:0001007;6.89e-09;81!UBERON:0001555;2.71e-08;54!UBERON:0000485;3.57e-08;7!UBERON:0003929;3.57e-08;7!UBERON:0006955;1.64e-07;2!UBERON:0004801;1.64e-07;2!UBERON:0003350;2.95e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.29e-43,17;UBERON:0005409,5.27e-30,25;UBERON:0002108,3.75e-23,4;UBERON:0001155,1.63e-22,9;UBERON:0000059,1.74e-18,11;UBERON:0004921,1.27e-13,118;UBERON:0001242,1.34e-13,4;UBERON:0001262,1.34e-13,4;UBERON:0004786,1.34e-13,4;UBERON:0004808,1.34e-13,4;UBERON:0001277,1.34e-13,4;UBERON:0001007,8.07e-11,145;UBERON:0001555,8.07e-11,145;UBERON:0007026,8.07e-11,145;UBERON:0004119,1.15e-09,160;UBERON:0000925,1.15e-09,160;UBERON:0006595,1.15e-09,160;UBERON:0003929,5.45e-08,54;UBERON:0011216,1.17e-07,223;UBERON:0006955,1.64e-07,2;UBERON:0004801,1.64e-07,2;UBERON:0003350,3.05e-07,8 | |||
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| ||
|short_description=p9@SPHK2 | |short_description=p9@SPHK2 | ||
}} | }} |
Latest revision as of 03:19, 19 September 2015
Short description: | p9@SPHK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SPHK2_5end |
Coexpression cluster: | C894_small_hepatoblastoma_colon_hepatocellular_liver_Intestinal_Prostate |
Association with transcript: | 54bp_to_uc002pjw.2_5end |
EntrezGene: | SPHK2 |
HGNC: | 18859 |
UniProt: | A0T4C8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.34e-13 | 4 |
epithelial cell of large intestine | 1.45e-07 | 2 |
epithelial cell of cervix | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.29e-43 | 17 |
gastrointestinal system | 5.27e-30 | 25 |
small intestine | 3.75e-23 | 4 |
colon | 1.63e-22 | 9 |
large intestine | 1.74e-18 | 11 |
subdivision of digestive tract | 1.27e-13 | 118 |
intestinal mucosa | 1.34e-13 | 4 |
wall of intestine | 1.34e-13 | 4 |
gastrointestinal system mucosa | 1.34e-13 | 4 |
gastrointestinal system epithelium | 1.34e-13 | 4 |
intestinal epithelium | 1.34e-13 | 4 |
digestive system | 8.07e-11 | 145 |
digestive tract | 8.07e-11 | 145 |
primitive gut | 8.07e-11 | 145 |
endoderm-derived structure | 1.15e-09 | 160 |
endoderm | 1.15e-09 | 160 |
presumptive endoderm | 1.15e-09 | 160 |
gut epithelium | 5.45e-08 | 54 |
organ system subdivision | 1.17e-07 | 223 |
uterine epithelium | 1.64e-07 | 2 |
cervix epithelium | 1.64e-07 | 2 |
epithelium of mucosa | 3.05e-07 | 8 |