FFCP PHASE1:Hg19::chr12:28123126..28123133,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:28123126..28123133,-
|short_description=p5@PTHLH
|description=CAGE_peak_5_at_PTHLH_5end
|association_with_transcript=-59bp_to_ENST00000534890_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5744 | |EntrezGene=5744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9607 | |HGNC=9607 | ||
|TSSclassifier=strong | |||
|UniProt=F5H485 | |UniProt=F5H485 | ||
|association_with_transcript=-59bp_to_ENST00000534890_5end | |||
|cluster_id=chr12:28123126..28123133,- | |||
|coexpression_cluster_id=C1359 | |||
|description=CAGE_peak_5_at_PTHLH_5end | |||
|id=chr12:28123126..28123133,- | |||
|ontology_enrichment_celltype=CL:0000066!4.29e-15!254;CL:0002076!1.32e-13!43;CL:0000220!1.36e-11!246;CL:0002321!3.03e-11!248;CL:0000223!4.59e-10!59;CL:0002368!4.19e-09!13;CL:0000076!4.34e-09!62;CL:0002159!9.96e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.09e-16;42!CL:0002368;1.14e-15;13!CL:0002159;5.73e-15;14!CL:0000244;7.96e-10;4!CL:0000731;7.96e-10;4!CL:0002621;2.72e-08;3!CL:0002202;4.05e-08;9!CL:0002632;4.05e-08;9!CL:0002166;4.35e-08;3!CL:0002251;6.42e-08;20!CL:0000307;1.25e-07;3!CL:0002077;2.68e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.97e-22,253;CL:0002076,4.85e-21,42;CL:0002368,7.16e-16,13;CL:0002159,4.90e-15,14;CL:0000223,6.99e-15,58;CL:0000076,1.95e-12,63;CL:0002321,5.05e-11,250;CL:0000244,9.94e-10,4;CL:0000731,9.94e-10,4;CL:0002077,1.24e-08,34;CL:0002621,2.70e-08,3;CL:0002202,2.96e-08,9;CL:0002632,2.96e-08,9;CL:0002166,5.33e-08,3;CL:0002251,5.54e-08,20;CL:0000068,1.06e-07,3;CL:0000069,1.06e-07,3;CL:0000307,1.06e-07,3;CL:0000377,1.06e-07,3;CL:0002328,9.57e-07,3;CL:0000240,9.82e-07,6;CL:0000311,9.82e-07,6;CL:0000079,9.82e-07,6;CL:0000237,9.82e-07,6;CL:0000036,9.82e-07,6;CL:0000357,9.82e-07,6;CL:0000114,9.82e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;1.25e-08;58!CL:0000377;1.25e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!1.42e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.36e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.78e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.25e-10!169;UBERON:0000925!3.25e-10!169;UBERON:0006595!3.25e-10!169;UBERON:0000161!1.54e-08!35;UBERON:0001004!1.47e-07!72;UBERON:0005157!1.59e-07!51;UBERON:0003102!2.75e-07!95;UBERON:0005153!8.78e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.34e-17;12!UBERON:0003729;2.65e-13;13!UBERON:0000344;8.46e-12;20!UBERON:0000365;1.86e-11;5!UBERON:0001708;1.02e-09;4!UBERON:0008895;1.02e-09;4!UBERON:0005910;1.80e-09;6!UBERON:0001949;2.72e-08;3!UBERON:0011159;9.40e-08;5!UBERON:0001828;1.83e-07;8!UBERON:0005911;2.18e-07;36!UBERON:0000161;1.00e-06;19!UBERON:0000166;1.00e-06;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003729,2.14e-13,13;UBERON:0000344,8.83e-12,20;UBERON:0000365,2.94e-11,5;UBERON:0001004,4.39e-10,74;UBERON:0001708,1.33e-09,4;UBERON:0008895,1.33e-09,4;UBERON:0003102,1.87e-09,99;UBERON:0005910,2.62e-09,6;UBERON:0010188,3.49e-09,6;UBERON:0002539,3.49e-09,6;UBERON:0008816,3.49e-09,6;UBERON:0004119,4.01e-09,160;UBERON:0000925,4.01e-09,160;UBERON:0006595,4.01e-09,160;UBERON:0000033,6.55e-09,56;UBERON:0001949,2.70e-08,3;UBERON:0000161,9.89e-08,36;UBERON:0011159,1.16e-07,5;UBERON:0000153,1.29e-07,62;UBERON:0007811,1.29e-07,62;UBERON:0001828,1.57e-07,8;UBERON:0000165,1.96e-07,29;UBERON:0000930,1.96e-07,29;UBERON:0000166,5.53e-07,22;UBERON:0005157,8.08e-07,47;UBERON:0004815,9.57e-07,3;UBERON:0002031,9.57e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,1.09220686065086,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,1.83884244895785,1.50602959389125,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,0.486634870302636,0.283604451492204,0,0.087834785693126,0,4.73583874780305,2.96627554227544,0,0,0,0,0,0,0.596287222100115,0,0.347140501607594,0,1.67799774483962,0,0,0,0,0.33472061276467,0,0,0,0,1.62028389576352,0,0,0.112611480483322,0,0,0,0,0,2.61656431285521,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,8.31602000097437,1.7308685049499,0,0,0,0,0,0.438977620880838,0,3.45547535485173,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0.323292113637624,1.77504796258307,0.604512589365842,0,4.44499962275583,4.36393792945335,4.30206893083506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,2.85350742062426,7.86812272803337,4.32274581370013,2.77765335475589,0.325808305310325,0,0,0.695582429850461,0.234817388471643,0,0,0,0,0,0,0,0,5.62403003920662,4.03157107677263,2.1266264586358,3.49278238541108,2.03443756959773,3.06706143332169,0,0,0,0,0,0.190493682876507,0.381988425558278,0,1.71072446022705,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,1.20575750823834,3.48613383440118,1.49959486773086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,1.54657762555539,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,1.10621501125022,0.0868836144680828,0,0,0,0,0,1.81876542867756,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0,0.532685175939381,0.574890092096664,0,0.464841513839837,0,4.81215528727884,1.84161977871793,0.803701137152247,0.182091168006717,0.655622074797121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0,1.72279661398852,1.30012049207304,1.6068392984416,0.193341436584244,0.154048617114644,0.15350367472613,0,0,0,0,0.178064071293475,3.8015530533025,3.2672311452068,5.35973392477253,3.54052232994425,0,0,0,0.616067160352178,0,0.869932992075073,0,0.715624433709956,0,0,0.190630193923825,0,0,1.90921948755562,0,0,0,0,0,0,0.421258456238981,0,2.92456187557541,1.05650146756755,0.409499734223957,0.565621727814851,1.13008116620243,2.2054613741845,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0.7133421029625,0,1.05553817648832,1.31717957183961,0.379473173765715,0.699869440489966,2.88666338176536,2.68120910214315,3.26672954583968,0,2.15252686335615,6.73885902670502,5.32116184244011,1.37834040124176,0,0,0,0,0,0,0,0,0,0,7.84128691139301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,5.72986763370456,0.593929361665277,4.30024982938925,0,0,0.667852230137435,0,0,0.19924798825107,0,0,4.39755334759266,0,0,0.898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0.7812832832557,0,0,2.27586896570999,0.508507300585533,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,1.53366118706464,0.230850775511391,0.455768223388005,0,0,0,1.27600463892768,0.549585560411174,0.533034776018635,0,0,0,0,0.19606253431774,0.335643173951685,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,1.77912677208373,0.494255755786011,0.313265848516366,0,0.802577647298789,0.702793337176017,0,1.56531695145672,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0.941798755221676,0,0,0.416024019039416,0,0.489961987071888,0.870592065804026,0.17472666824203,0.171986032471617,0,0,0,0,0,0.90392296312213,0,0,0.0633107959558787,0,2.08412932653988,2.13452994739353,2.99714414373195,0.288180834308212,0,0,0.720273989940749,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0.859530882839914,0,0.558564802544508,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0.272406812223151,0,0,0,0,0,0.182248669974074,0.335434687599266,0,0.0524545881349981,0.739202355635845,0.35857467866569,1.91915197319445,0,0,0,0,0,0.979762080328227,0,2.38068310173083,0.170388021785422,0,0,0,0,0,0.684347351537318,0,0,0.157204305099666,0,0,0,0,1.27668251554036,0,0,0,0,6.43921794625961,0,0,0,0,0,0.248385611765534,0,3.12451019905266,0,0,0,0,0.144921028610825,0.597019211547496,0,0.554805861502613,0.189403005275089,0.251567901752575,0.889811221596536,0.228840068396924,0.302461847526478,1.39893480524502,0.443565449968902,0.477890301491107,0.449803112163605,2.01841843939137,0.414706207840855,0.265841714557995,1.04349012362347,0,0,0,0.909243296012797,1.71856891267982,0.928067519756987,1.19428766609585,0,0.686791410365586,0.673498977531838,0,0,0.214441591374926,0.260994291965212,0.906823702049089,0.926089897295336,0,0,0,0.219284049578707,0,0,0.67576976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| ||
|short_description=p5@PTHLH | |||
}} | }} |
Latest revision as of 00:45, 18 September 2015
Short description: | p5@PTHLH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTHLH_5end |
Coexpression cluster: | C1359_acantholytic_Mallassezderived_maxillary_renal_gastric_amniotic_Prostate |
Association with transcript: | -59bp_to_ENST00000534890_5end |
EntrezGene: | PTHLH |
HGNC: | 9607 |
UniProt: | F5H485 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.97e-22 | 253 |
endo-epithelial cell | 4.85e-21 | 42 |
respiratory epithelial cell | 7.16e-16 | 13 |
general ecto-epithelial cell | 4.90e-15 | 14 |
endodermal cell | 6.99e-15 | 58 |
squamous epithelial cell | 1.95e-12 | 63 |
embryonic cell | 5.05e-11 | 250 |
transitional epithelial cell | 9.94e-10 | 4 |
urothelial cell | 9.94e-10 | 4 |
ecto-epithelial cell | 1.24e-08 | 34 |
gingival epithelial cell | 2.70e-08 | 3 |
epithelial cell of tracheobronchial tree | 2.96e-08 | 9 |
epithelial cell of lower respiratory tract | 2.96e-08 | 9 |
epithelial cell of Malassez | 5.33e-08 | 3 |
epithelial cell of alimentary canal | 5.54e-08 | 20 |
duct epithelial cell | 1.06e-07 | 3 |
branched duct epithelial cell | 1.06e-07 | 3 |
tracheal epithelial cell | 1.06e-07 | 3 |
tracheoblast | 1.06e-07 | 3 |
bronchial epithelial cell | 9.57e-07 | 3 |
stratified squamous epithelial cell | 9.82e-07 | 6 |
keratin accumulating cell | 9.82e-07 | 6 |
stratified epithelial cell | 9.82e-07 | 6 |
keratinizing barrier epithelial cell | 9.82e-07 | 6 |
epithelial fate stem cell | 9.82e-07 | 6 |
stratified epithelial stem cell | 9.82e-07 | 6 |
surface ectodermal cell | 9.82e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mouth mucosa | 2.14e-13 | 13 |
mucosa | 8.83e-12 | 20 |
urothelium | 2.94e-11 | 5 |
respiratory system | 4.39e-10 | 74 |
jaw skeleton | 1.33e-09 | 4 |
splanchnocranium | 1.33e-09 | 4 |
surface structure | 1.87e-09 | 99 |
transitional epithelium | 2.62e-09 | 6 |
protuberance | 3.49e-09 | 6 |
pharyngeal arch | 3.49e-09 | 6 |
embryonic head | 3.49e-09 | 6 |
endoderm-derived structure | 4.01e-09 | 160 |
endoderm | 4.01e-09 | 160 |
presumptive endoderm | 4.01e-09 | 160 |
head | 6.55e-09 | 56 |
gingival epithelium | 2.70e-08 | 3 |
orifice | 9.89e-08 | 36 |
primary subdivision of cranial skeletal system | 1.16e-07 | 5 |
anterior region of body | 1.29e-07 | 62 |
craniocervical region | 1.29e-07 | 62 |
gingiva | 1.57e-07 | 8 |
mouth | 1.96e-07 | 29 |
stomodeum | 1.96e-07 | 29 |
oral opening | 5.53e-07 | 22 |
epithelial fold | 8.08e-07 | 47 |
lower respiratory tract epithelium | 9.57e-07 | 3 |
epithelium of bronchus | 9.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.78e-11 | 14 |