FFCP PHASE1:Hg19::chr19:58571939..58571949,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:58571939..58571949,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_at_chr19:58571939..58571949,- | |description=CAGE_peak_at_chr19:58571939..58571949,- | ||
|id=chr19:58571939..58571949,- | |id=chr19:58571939..58571949,- | ||
|ontology_enrichment_celltype=CL:0002322!4.82e-11!5;CL:0000039!7.94e-09!7;CL:0000586!7.94e-09!7 | |ontology_enrichment_celltype=CL:0002322!4.82e-11!5;CL:0000039!7.94e-09!7;CL:0000586!7.94e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.50e-75;7!CL:0000586;3.50e-75;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.63e-75,7;CL:0000586,2.63e-75,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.44e-53;10!UBERON:0005564;6.44e-53;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;1.66e-24;22!DOID:2994;1.66e-24;22!DOID:4556;2.19e-12;3!DOID:3908;5.92e-08;5 | |||
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| ||
|short_description=p@chr19:58571939..58571949,- | |short_description=p@chr19:58571939..58571949,- | ||
}} | }} |
Latest revision as of 17:53, 27 July 2015
Short description: | p@chr19:58571939..58571949, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:58571939..58571949, - |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.63e-75 | 7 |
germ cell | 2.63e-75 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.12e-66 | 8 |
male reproductive organ | 2.86e-48 | 11 |
gonad | 1.12e-25 | 21 |
indifferent external genitalia | 1.12e-25 | 21 |
indifferent gonad | 1.12e-25 | 21 |
gonad primordium | 1.12e-25 | 21 |
external genitalia | 1.51e-24 | 22 |
male organism | 1.51e-24 | 22 |
male reproductive system | 1.51e-24 | 22 |
duodenum | 3.24e-12 | 2 |
body cavity | 4.39e-12 | 46 |
reproductive organ | 1.32e-11 | 48 |
body cavity or lining | 2.22e-11 | 49 |
body cavity precursor | 2.23e-10 | 54 |
reproductive structure | 1.52e-09 | 59 |
reproductive system | 1.52e-09 | 59 |
anatomical cavity | 3.00e-09 | 61 |
small intestine | 7.49e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.51e-24 | 22 |
germ cell cancer | 1.51e-24 | 22 |
lung large cell carcinoma | 2.31e-12 | 3 |
carcinoma | 3.00e-08 | 106 |
non-small cell lung carcinoma | 6.13e-08 | 5 |