FFCP PHASE1:Hg19::chr3:45125452..45125503,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64866 | |EntrezGene=64866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=24357 | |HGNC=24357 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-486bp_to_AK026329_5end | |association_with_transcript=-486bp_to_AK026329_5end | ||
|cluster_id=chr3:45125452..45125503,- | |||
|description=CAGE_peak_4_at_CDCP1_5end | |description=CAGE_peak_4_at_CDCP1_5end | ||
|id=chr3:45125452..45125503,- | |id=chr3:45125452..45125503,- | ||
|ontology_enrichment_celltype=CL:0000066!2.94e-22!254;CL:0000220!2.86e-16!246;CL:0002321!4.82e-16!248;CL:0002076!2.02e-14!43;CL:0000223!1.07e-10!59;CL:0000393!5.02e-10!60;CL:0000211!5.02e-10!60;CL:0000680!5.71e-10!57;CL:0000056!5.71e-10!57;CL:0000355!5.71e-10!57;CL:0000187!7.22e-10!54;CL:0000192!7.26e-10!42;CL:0000514!7.26e-10!42;CL:0000183!8.06e-10!59;CL:0000359!9.56e-09!32;CL:0002368!2.07e-08!13;CL:0000548!3.79e-08!679;CL:0000004!3.79e-08!679;CL:0000255!3.79e-08!679;CL:0000012!1.00e-07!682 | |ontology_enrichment_celltype=CL:0000066!2.94e-22!254;CL:0000220!2.86e-16!246;CL:0002321!4.82e-16!248;CL:0002076!2.02e-14!43;CL:0000223!1.07e-10!59;CL:0000393!5.02e-10!60;CL:0000211!5.02e-10!60;CL:0000680!5.71e-10!57;CL:0000056!5.71e-10!57;CL:0000355!5.71e-10!57;CL:0000187!7.22e-10!54;CL:0000192!7.26e-10!42;CL:0000514!7.26e-10!42;CL:0000183!8.06e-10!59;CL:0000359!9.56e-09!32;CL:0002368!2.07e-08!13;CL:0000548!3.79e-08!679;CL:0000004!3.79e-08!679;CL:0000255!3.79e-08!679;CL:0000012!1.00e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.84e-10;32!CL:0002368;1.05e-09;13!CL:0002539;4.36e-09;10!CL:0002076;5.06e-09;42!CL:0002595;2.79e-07;5!CL:0000244;5.81e-07;4!CL:0000731;5.81e-07;4!CL:0002202;6.44e-07;9!CL:0002632;6.44e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.48e-14,253;CL:0002321,2.14e-11,250;CL:0002076,7.65e-11,42;CL:0000359,1.66e-10,32;CL:0002368,5.94e-10,13;CL:0002539,1.85e-09,10;CL:0000223,1.69e-08,58;CL:0000192,2.31e-07,43;CL:0000514,2.31e-07,43;CL:0002595,2.58e-07,5;CL:0002202,3.73e-07,9;CL:0002632,3.73e-07,9;CL:0000244,6.74e-07,4;CL:0000731,6.74e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.01e-12!106;DOID:193!1.37e-10!29;DOID:120!3.75e-10!27;DOID:2394!1.11e-09!14;DOID:0050687!4.47e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.64e-15;14!DOID:193;7.72e-10;29!DOID:120;1.24e-09;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.33e-15,14;DOID:193,8.56e-10,29;DOID:120,1.32e-09,27 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.21e-15!169;UBERON:0000925!1.21e-15!169;UBERON:0006595!1.21e-15!169;UBERON:0003104!4.11e-15!238;UBERON:0009142!4.11e-15!238;UBERON:0000481!4.97e-13!347;UBERON:0001007!1.40e-12!155;UBERON:0001555!1.40e-12!155;UBERON:0007026!1.40e-12!155;UBERON:0002100!3.77e-12!216;UBERON:0000486!4.23e-11!82;UBERON:0004921!5.36e-11!129;UBERON:0004185!5.36e-11!129;UBERON:0001048!1.53e-10!168;UBERON:0000464!1.69e-10!104;UBERON:0005256!2.26e-10!143;UBERON:0000065!2.30e-09!53;UBERON:0000466!2.33e-09!126;UBERON:0000922!4.23e-09!612;UBERON:0001004!5.79e-09!72;UBERON:0004573!7.45e-09!33;UBERON:0004571!7.45e-09!33;UBERON:0005911!9.03e-09!82;UBERON:0000490!1.07e-08!138;UBERON:0002385!1.35e-08!63;UBERON:0001015!1.35e-08!63;UBERON:0000383!1.35e-08!63;UBERON:0002050!1.66e-08!605;UBERON:0005423!1.66e-08!605;UBERON:0000072!1.88e-08!46;UBERON:0004290!1.89e-08!70;UBERON:0000923!2.30e-08!604;UBERON:0005291!2.30e-08!604;UBERON:0006598!2.30e-08!604;UBERON:0002532!2.30e-08!604;UBERON:0005153!2.54e-08!37;UBERON:0001134!2.59e-08!61;UBERON:0002036!2.59e-08!61;UBERON:0003082!2.59e-08!61;UBERON:0001041!3.95e-08!98;UBERON:0000914!6.06e-08!83;UBERON:0002329!6.06e-08!83;UBERON:0003077!6.06e-08!83;UBERON:0003059!6.06e-08!83;UBERON:0007282!6.06e-08!83;UBERON:0009618!6.06e-08!83;UBERON:0007285!6.06e-08!83;UBERON:0008947!1.17e-07!38;UBERON:0003258!1.17e-07!38;UBERON:0000077!1.23e-07!130;UBERON:0000483!1.27e-07!309;UBERON:0000119!2.14e-07!312;UBERON:0007196!2.67e-07!14;UBERON:0001558!2.67e-07!14;UBERON:0005178!2.75e-07!34;UBERON:0002224!2.75e-07!34;UBERON:0000467!3.71e-07!625;UBERON:0000480!4.99e-07!626;UBERON:0001637!6.11e-07!42;UBERON:0003509!6.11e-07!42;UBERON:0004572!6.11e-07!42;UBERON:0005156!6.29e-07!59;UBERON:0000990!6.29e-07!59;UBERON:0005181!8.30e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.23e-09;13!UBERON:0004237;4.36e-09;10!UBERON:0004695;4.36e-09;10!UBERON:0002111;4.36e-09;10!UBERON:0004178;4.36e-09;10!UBERON:0004573;7.89e-09;33!UBERON:0004571;7.89e-09;33!UBERON:0005911;1.35e-08;36!UBERON:0004807;4.90e-08;22!UBERON:0003834;2.79e-07;5!UBERON:0001533;2.79e-07;5!UBERON:0000486;3.19e-07;12!UBERON:0002118;4.99e-07;5!UBERON:0003513;8.10e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,8.84e-11,199;UBERON:0004573,3.16e-10,33;UBERON:0004571,3.16e-10,33;UBERON:0000992,9.63e-10,13;UBERON:0004237,1.85e-09,10;UBERON:0004695,1.85e-09,10;UBERON:0002111,1.85e-09,10;UBERON:0004178,1.85e-09,10;UBERON:0000486,2.88e-08,83;UBERON:0001637,9.20e-08,42;UBERON:0003509,9.20e-08,42;UBERON:0004572,9.20e-08,42;UBERON:0003834,2.58e-07,5;UBERON:0001533,2.58e-07,5;UBERON:0002118,3.39e-07,5;UBERON:0003513,7.27e-07,7;UBERON:0005911,7.36e-07,82;UBERON:0001048,7.61e-07,160;UBERON:0005153,8.44e-07,37;UBERON:0005177,8.72e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.873765488520689,0.527533956456907,0.866364470720326,0,13.4465029290355,12.6565850885035,11.684961446198,10.7345215733912,0.738726348460727,0.204000691244253,0.313454721478088,0.572471974262113,0.684372125364421,0.502170558379211,0.0764134057479513,0,0,0,0,0,2.75826367343678,1.8072355126695,3.32778609150109,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0.822335776043652,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.945348171640679,0.221729397462564,1.22968699970376,0.0654895377488563,1.45718115317017,2.22470665670658,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,2.61656431285521,0.496971951695318,0.759783069987479,0.926864265692532,0.860509862246441,2.12801029319014,0,0,0.49333509683432,0,0,0,0,0,1.17160715916898,1.5608003841516,0,0.149448680551801,0.939475989150119,0.161872944368132,0.421352420106746,0,1.59684612505298,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0.453728732640084,0,0,0.211931901159562,0,0,0,0,0.506328996723799,0.0974370051611986,0,0.0920498986422993,0,0.355009592516614,0,0,5.41130388857231,3.81844568827169,3.44165514466805,0,0.132529768321485,0.348581828608555,0.10366105501537,0.504641701751257,0.36497735907583,3.12899064659632,0,0,0,0,0.709840800239063,0.337169380156203,0.723033089650446,0.330881918197182,0.653638332277218,0.949082476444386,0.269662616320329,0,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0.245976877086227,2.74508496477641,4.06076056011915,0,5.32803553781643,4.62942225792648,0,0,2.88662684050547,0.115930404975077,0.821860859650752,0,0,0,0,0,0.492434012174795,0,0,0.93733833986777,1.17587489739202,3.96970272278682,5.10483579406235,2.3250715081117,2.30029607499127,0,0.176096868026452,0.414656231081544,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.22001485746285,0.258543431515556,0,0,0,0,0.514414748524284,0,0,0.285955987316295,0,0,0.65147236858747,0,1.58390374586686,2.1100756394171,1.74306691720059,4.09889263846434,1.2162378064119,0,0,0,0,2.85273810081437,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0,0,0.542530047399471,0.415941723061614,0,0.315404830067869,0.468565659970853,0,0,1.03473071292505,0,0.368738337083406,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,1.48418066444991,2.00472601943452,0.532685175939381,1.23190734020714,1.55776328755086,2.44041794765914,0.483437798366489,3.80962293576241,7.91896504848708,0.803701137152247,0.910455840033585,0.524497659837696,0.902399225814824,2.46449078734127,0,0,1.58327443339314,0,0.510281115829547,0.431831832204279,0,0.812839312631559,1.50506932156456,1.78413391131527,3.3243040357149,1.11937377361089,0,0,0.256450125116389,0.984043937099117,0,0.206082023295445,0,0,0.574265537996172,1.30012049207304,3.21367859688319,1.35339005608971,0.770243085573222,0.614014698904518,0.137836572484531,0.214840489736547,0,0.852266274161009,0.0890320356467374,5.2891172915513,3.65161127993702,0.638063562472921,5.15904682363305,1.85938219718914,4.7221852024596,0.6970372701606,1.84820148105653,2.66153015158511,0,0.18532421910392,0.143124886741991,0.372158369359667,0.632758849437452,0,1.27948895655667,0,0.636406495851874,2.35484592059769,0.179872457583315,0.274537029736055,0.117812402345686,1.2130948894399,3.17020642346017,3.79132610615083,0.48763373908959,9.50482609562009,4.22600587027022,0.272999822815972,0.141405431953713,1.13008116620243,1.10273068709225,2.65375590096488,1.75380354101505,0.578775534266688,0.655894752046633,0.202910376962704,0.30982349809975,0,0.286822704408103,0,0,0.709522128141196,0,0,0,0.699869440489966,3.65644028356946,0.670302275535787,2.17781969722645,0.188287601553558,3.87454835404107,5.05414427002877,3.10401107475673,3.21612760289743,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0.383010740264733,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,2.27308917445131,0,0.296964680832639,0,0,0,0.779160935160341,0,0.211125408127993,0,0,0.251932747854276,0,0.123084805461069,0.311039587661807,0.718946809178615,1.43216939740487,0,0,0,0,0,0.0927680981618513,0,0,0,0,1.137934482855,1.77977555204936,0.709163045303809,0,0,0.173624994933292,0,0,0,0,0,0,0,0.83654246567162,0.307801034015188,0.797594390929008,0.69169171316418,0.179515288819544,0.108647371922008,0,0.549585560411174,0,0,0,0,0.451191321234361,0.392125068635479,0,0.37950746544837,0,0.210998064528027,0,0.141353071433941,0,2.98578579323551,0.353830258013357,2.4441205797345,0.593042257361244,0,0,0,0,0,0,1.17398771359254,0.728341138602278,1.18375320854817,1.20990716048664,0.30607276163049,0,0,0,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| ||
|short_description=p4@CDCP1 | |short_description=p4@CDCP1 | ||
}} | }} |
Latest revision as of 08:42, 18 September 2015
Short description: | p4@CDCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDCP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -486bp_to_AK026329_5end |
EntrezGene: | CDCP1 |
HGNC: | 24357 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.48e-14 | 253 |
embryonic cell | 2.14e-11 | 250 |
endo-epithelial cell | 7.65e-11 | 42 |
vascular associated smooth muscle cell | 1.66e-10 | 32 |
respiratory epithelial cell | 5.94e-10 | 13 |
aortic smooth muscle cell | 1.85e-09 | 10 |
endodermal cell | 1.69e-08 | 58 |
smooth muscle cell | 2.31e-07 | 43 |
smooth muscle myoblast | 2.31e-07 | 43 |
smooth muscle cell of the subclavian artery | 2.58e-07 | 5 |
epithelial cell of tracheobronchial tree | 3.73e-07 | 9 |
epithelial cell of lower respiratory tract | 3.73e-07 | 9 |
transitional epithelial cell | 6.74e-07 | 4 |
urothelial cell | 6.74e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
trunk | 8.84e-11 | 199 |
systemic artery | 3.16e-10 | 33 |
systemic arterial system | 3.16e-10 | 33 |
female gonad | 9.63e-10 | 13 |
blood vessel smooth muscle | 1.85e-09 | 10 |
arterial system smooth muscle | 1.85e-09 | 10 |
artery smooth muscle tissue | 1.85e-09 | 10 |
aorta smooth muscle tissue | 1.85e-09 | 10 |
multilaminar epithelium | 2.88e-08 | 83 |
artery | 9.20e-08 | 42 |
arterial blood vessel | 9.20e-08 | 42 |
arterial system | 9.20e-08 | 42 |
thoracic segment blood vessel | 2.58e-07 | 5 |
subclavian artery | 2.58e-07 | 5 |
right ovary | 3.39e-07 | 5 |
trunk blood vessel | 7.27e-07 | 7 |
endo-epithelium | 7.36e-07 | 82 |
primordium | 7.61e-07 | 160 |
epithelial bud | 8.44e-07 | 37 |
trunk region element | 8.72e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.33e-15 | 14 |
reproductive organ cancer | 8.56e-10 | 29 |
female reproductive organ cancer | 1.32e-09 | 27 |