FFCP PHASE1:Hg19::chr4:120549834..120549846,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8654 | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8784 | |HGNC=8784 | ||
|TSSclassifier=strong | |||
|UniProt=O76074 | |UniProt=O76074 | ||
|association_with_transcript=134bp_to_NM_001083,uc003idh.2_5end | |association_with_transcript=134bp_to_NM_001083,uc003idh.2_5end | ||
|cluster_id=chr4:120549834..120549846,- | |||
|coexpression_cluster_id=C1933 | |||
|description=CAGE_peak_15_at_PDE5A_5end | |description=CAGE_peak_15_at_PDE5A_5end | ||
|id=chr4:120549834..120549846,- | |id=chr4:120549834..120549846,- | ||
|ontology_enrichment_celltype=CL:0000055!4.82e-10!180;CL:0000057!5.68e-07!75 | |ontology_enrichment_celltype=CL:0000055!4.82e-10!180;CL:0000057!5.68e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0002622;5.14e-24;3!CL:0002504;4.01e-23;3!CL:1000279;4.01e-23;3!CL:1000280;4.01e-23;3!CL:1000487;4.14e-16;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,4.97e-24,3;CL:0002504,3.09e-23,3;CL:1000279,3.09e-23,3;CL:1000280,3.09e-23,3;CL:1000487,3.44e-16,2;CL:0000192,5.42e-10,43;CL:0000514,5.42e-10,43;CL:0000187,1.42e-07,55;CL:0000680,3.98e-07,58;CL:0000056,3.98e-07,58;CL:0000355,3.98e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.27e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.07e-22;3!DOID:127;2.07e-22;3!DOID:0060072;5.73e-17;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.61e-22,3;DOID:127,3.61e-22,3;DOID:0060072,8.68e-17,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.30e-17;11!UBERON:0010147;2.30e-17;11!UBERON:0003937;6.62e-16;12!UBERON:0005399;6.62e-16;12!UBERON:0000059;4.75e-11;11!UBERON:0000160;3.72e-10;17!UBERON:0003101;1.39e-08;22!UBERON:0000079;1.39e-08;22!UBERON:0001155;4.61e-08;9!UBERON:0005409;6.63e-08;22!UBERON:0000077;5.99e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.08e-17,11;UBERON:0010147,2.08e-17,11;UBERON:0009846,2.08e-17,11;UBERON:0003353,2.08e-17,11;UBERON:0004902,2.08e-17,11;UBERON:0003820,2.08e-17,11;UBERON:0009847,2.08e-17,11;UBERON:0003937,6.05e-16,12;UBERON:0005399,6.05e-16,12;UBERON:0001046,4.80e-14,19;UBERON:0000162,1.21e-13,14;UBERON:0001353,1.21e-13,14;UBERON:0000163,1.21e-13,14;UBERON:0006866,1.21e-13,14;UBERON:0000164,1.21e-13,14;UBERON:0000931,1.21e-13,14;UBERON:0004122,1.01e-12,15;UBERON:0000059,3.85e-11,11;UBERON:0000160,2.85e-10,17;UBERON:0003101,1.33e-08,22;UBERON:0000079,1.33e-08,22;UBERON:0004921,2.61e-08,118;UBERON:0001155,4.23e-08,9;UBERON:0003104,1.23e-07,160;UBERON:0009142,1.23e-07,160;UBERON:0005156,4.75e-07,59;UBERON:0000990,4.75e-07,59;UBERON:0005409,4.80e-07,25;UBERON:0005153,5.38e-07,37 | |||
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| ||
|short_description=p15@PDE5A | |short_description=p15@PDE5A | ||
}} | }} |
Latest revision as of 22:59, 24 September 2015
Short description: | p15@PDE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PDE5A_5end |
Coexpression cluster: | C1933_glioblastoma_small_Prostate_Smooth_rhabdomyosarcoma_normal_sacrococcigeal |
Association with transcript: | 134bp_to_NM_001083, uc003idh.2_5end |
EntrezGene: | PDE5A |
HGNC: | 8784 |
UniProt: | O76074 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 4.97e-24 | 3 |
enteric smooth muscle cell | 3.09e-23 | 3 |
smooth muscle cell of large intestine | 3.09e-23 | 3 |
smooth muscle cell of colon | 3.09e-23 | 3 |
smooth muscle cell of prostate | 3.44e-16 | 2 |
smooth muscle cell | 5.42e-10 | 43 |
smooth muscle myoblast | 5.42e-10 | 43 |
muscle cell | 1.42e-07 | 55 |
muscle precursor cell | 3.98e-07 | 58 |
myoblast | 3.98e-07 | 58 |
multi-potent skeletal muscle stem cell | 3.98e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.08e-17 | 11 |
male accessory sex gland | 2.08e-17 | 11 |
embryonic cloacal epithelium | 2.08e-17 | 11 |
epithelium of hindgut | 2.08e-17 | 11 |
urogenital sinus epithelium | 2.08e-17 | 11 |
prostate bud | 2.08e-17 | 11 |
prostate field | 2.08e-17 | 11 |
sex gland | 6.05e-16 | 12 |
male reproductive gland | 6.05e-16 | 12 |
hindgut | 4.80e-14 | 19 |
cloaca | 1.21e-13 | 14 |
anal region | 1.21e-13 | 14 |
embryonic cloaca | 1.21e-13 | 14 |
terminal part of digestive tract | 1.21e-13 | 14 |
primitive urogenital sinus | 1.21e-13 | 14 |
proctodeum | 1.21e-13 | 14 |
genitourinary system | 1.01e-12 | 15 |
large intestine | 3.85e-11 | 11 |
intestine | 2.85e-10 | 17 |
male organism | 1.33e-08 | 22 |
male reproductive system | 1.33e-08 | 22 |
subdivision of digestive tract | 2.61e-08 | 118 |
colon | 4.23e-08 | 9 |
mesenchyme | 1.23e-07 | 160 |
entire embryonic mesenchyme | 1.23e-07 | 160 |
reproductive structure | 4.75e-07 | 59 |
reproductive system | 4.75e-07 | 59 |
gastrointestinal system | 4.80e-07 | 25 |
epithelial bud | 5.38e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.61e-22 | 3 |
leiomyoma | 3.61e-22 | 3 |
benign neoplasm | 8.68e-17 | 4 |