FFCP PHASE1:Hg19::chr12:52541065..52541093,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:52541065..52541093,-
|short_description=p@chr12:52541065..52541093,-
|description=CAGE_peak_at_chr12:52541065..52541093,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52541065..52541093,- | |||
|description=CAGE_peak_at_chr12:52541065..52541093,- | |||
|id=chr12:52541065..52541093,- | |||
|ontology_enrichment_celltype=CL:0000066!2.74e-45!254;CL:0000076!3.30e-19!62;CL:0002076!7.00e-16!43;CL:0000223!1.01e-12!59;CL:0000220!1.23e-10!246;CL:0002321!2.67e-10!248;CL:0000063!2.32e-09!578;CL:0002368!1.20e-08!13;CL:0000077!1.61e-07!19;CL:0000548!8.59e-07!679;CL:0000004!8.59e-07!679;CL:0000255!8.59e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.43e-11;13!CL:0002202;7.19e-11;9!CL:0002632;7.19e-11;9!CL:0002076;1.44e-08;42!CL:0000077;1.18e-07;19!CL:0002577;1.69e-07;3!CL:0000307;2.28e-07;3!CL:0002328;2.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.78e-32,253;CL:0000076,4.74e-15,63;CL:0002076,4.77e-12,42;CL:0002368,2.34e-11,13;CL:0002202,9.02e-11,9;CL:0002632,9.02e-11,9;CL:0000223,2.09e-08,58;CL:0002577,1.68e-07,3;CL:0000077,1.96e-07,19;CL:0000068,2.07e-07,3;CL:0000069,2.07e-07,3;CL:0000307,2.07e-07,3;CL:0000377,2.07e-07,3;CL:0002328,2.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.97e-08;29!CL:0000377;2.28e-07;3 | |||
|ontology_enrichment_disease=DOID:305!3.58e-24!106;DOID:0050687!4.20e-14!143;DOID:1749!8.77e-11!14;DOID:299!5.37e-10!25;DOID:162!1.27e-07!235;DOID:14566!1.73e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;9.23e-14;14!DOID:305;2.75e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.31e-24,106;DOID:0050687,1.39e-16,143;DOID:1749,7.50e-14,14;DOID:162,2.07e-11,235;DOID:14566,7.05e-11,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.34e-18!169;UBERON:0000925!2.34e-18!169;UBERON:0006595!2.34e-18!169;UBERON:0001004!5.78e-14!72;UBERON:0000077!8.49e-14!130;UBERON:0000065!5.98e-13!53;UBERON:0001007!9.07e-13!155;UBERON:0001555!9.07e-13!155;UBERON:0007026!9.07e-13!155;UBERON:0008947!2.01e-11!38;UBERON:0003258!2.01e-11!38;UBERON:0000072!7.51e-11!46;UBERON:0004921!2.12e-10!129;UBERON:0004185!2.12e-10!129;UBERON:0001041!1.19e-08!98;UBERON:0001737!2.81e-08!9;UBERON:0000467!1.83e-07!625;UBERON:0000480!2.33e-07!626;UBERON:0003104!2.40e-07!238;UBERON:0009142!2.40e-07!238;UBERON:0000161!2.93e-07!35;UBERON:0005631!3.11e-07!14;UBERON:0000158!3.11e-07!14;UBERON:0003102!5.79e-07!95;UBERON:0005153!5.90e-07!37;UBERON:0001557!6.19e-07!19;UBERON:0000468!6.48e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.90e-16;9!UBERON:0001557;2.90e-16;9!UBERON:0000072;2.30e-13;37!UBERON:0000065;1.70e-11;44!UBERON:0001004;1.53e-08;65!UBERON:0005910;3.15e-08;6!UBERON:0004815;2.38e-07;3!UBERON:0002031;2.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.80e-16,9;UBERON:0008947,3.14e-14,38;UBERON:0003258,3.14e-14,38;UBERON:0001004,5.38e-13,74;UBERON:0000065,4.70e-12,54;UBERON:0000072,6.66e-12,47;UBERON:0004119,1.75e-11,160;UBERON:0000925,1.75e-11,160;UBERON:0006595,1.75e-11,160;UBERON:0001557,2.28e-08,19;UBERON:0005910,2.92e-08,6;UBERON:0005631,5.71e-08,14;UBERON:0000158,5.71e-08,14;UBERON:0004815,2.35e-07,3;UBERON:0002031,2.35e-07,3;UBERON:0001041,2.47e-07,87;UBERON:0001007,7.00e-07,145;UBERON:0001555,7.00e-07,145;UBERON:0007026,7.00e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,1.31064823278103,0.527533956456907,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,5.51652734687356,6.024118375565,4.80680213216824,0,0,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0,1.82147644146271,2.22470665670658,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0.694281003215189,0,0.838998872419812,0,0.626984899610432,0,0,0,0.402829317109147,2.28081631715554,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0.872188104285069,0,0.379891534993739,0.264818361626438,1.72101972449288,0.354668382198357,0,1.06748995729705,0.74000264525148,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0,0,0.309977343527296,0,0,0,0,0.336672227908132,0,0,0.877955241761676,0,0,0.226864366320042,3.40840307808838,0.213557388818567,0,2.10063767259082,0.206105058476878,2.06112432036503,0,1.0126579934476,0.194874010322397,1.51460264546469,0,0,0.710019185033229,0,0.169560592310488,0.386521706326594,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,2.60274960087657,2.52877035117153,2.6511213287183,4.19117096383097,3.26819166138609,2.60997681022206,2.15730093056263,1.17732879075208,2.69323009862473,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,8.99214026060957,1.91005047582099,0.833296006426766,0,1.03993478527958,0,0.115930404975077,0,0,0,0,10.2726571734706,3.43394464837949,0,0,0,0,0.503946384596579,0.425325291727159,0.716468181622786,0.290633938513962,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.35142424497814,0,0,1.03473071292505,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,7.57818928615649,6.65741758041988,5.44302527993425,0,0.460385919864187,0,0,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.460404944679482,0.34444334449382,0.182091168006717,0.131124414959424,0.451199612907412,0.231046011313244,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0.431831832204279,0,0,0,0.764628819135115,0,0.447749509444357,0,0,0.769350375349168,0.656029291399411,0,0.206082023295445,0.27470839445503,0.082509499920588,1.72279661398852,0.650060246036521,1.6068392984416,0.096670718292122,0,0.15350367472613,0,0,0,0.0852266274161009,0,0.661139661443912,0.768760269460425,7.2739246121913,1.0115778085555,0,0.62962469366128,1.3940745403212,0,0.532306030317022,0,0,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.92947049429925,0.281695602532241,0,0,0.35667105148125,0,0.211107635297664,0,0,0.699869440489966,2.79044126903985,10.0545341330368,13.0669181833587,0.282431402330337,1.29151611801369,8.42357378338128,2.66058092122005,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42707567183837,0,0,0.111443384277478,0.284136146806413,2.3874448473769,1.78178808499583,5.22173193568695,0,0,0.111308705022906,0,0.422250816255987,0.796991953004279,0.552567831062295,0,0.306806047506464,0,0,2.15684042753584,0.895105873378046,0,0.690503839458535,0,0,0,0,0,1.30213880542617,0,0,0.227586896570999,1.01701460117107,0.236387681767936,0,0,0,0,0,0,0,0,0,0.21787692703798,4.0432885840795,0.307801034015188,0,0,0,0,1.5950057986596,0.549585560411174,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,1.63232808159148,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,0,0,0,4.69595085437015,0.242780379534093,0,0,0,0,0,0,0,0.992975867626496,1.56966459203613,0,0.853828638089378,0,0.520679215005393,2.84177952501695,10.1859271699071,0,0,3.48322792640707,2.92357268344742,3.530964653288,0.0969890164884194,0,0.677942222341597,0.411125773940253,0.19871461170299,0,11.7330829640882,0.0801588202515337,0.640358984218058,0.999048047910651,0,0,0,1.1524383839052,1.24252535565433,1.64985824231757,1.22313785466253,0.941425616810999,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0.674921674654501,6.1904156364636,0,1.67717343799633,0.0788057072991982,0.104909176269996,0.211200673038813,0,10.36342065525,0,0,3.30549098951175,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,1.40963004463334,0.427149650270779,0.314408610199332,0,0,0,0,3.83004754662109,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.499921631848426,0,0,0.941063278792687,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.457680136793847,0,0.621748802331122,0.295710299979268,0,0,0.1552629568762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| ||
|short_description=p@chr12:52541065..52541093,- | |||
}} | }} |
Latest revision as of 09:28, 24 July 2015
Short description: | p@chr12:52541065..52541093, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52541065..52541093, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.78e-32 | 253 |
squamous epithelial cell | 4.74e-15 | 63 |
endo-epithelial cell | 4.77e-12 | 42 |
respiratory epithelial cell | 2.34e-11 | 13 |
epithelial cell of tracheobronchial tree | 9.02e-11 | 9 |
epithelial cell of lower respiratory tract | 9.02e-11 | 9 |
endodermal cell | 2.09e-08 | 58 |
placental epithelial cell | 1.68e-07 | 3 |
mesothelial cell | 1.96e-07 | 19 |
duct epithelial cell | 2.07e-07 | 3 |
branched duct epithelial cell | 2.07e-07 | 3 |
tracheal epithelial cell | 2.07e-07 | 3 |
tracheoblast | 2.07e-07 | 3 |
bronchial epithelial cell | 2.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.80e-16 | 9 |
respiratory primordium | 3.14e-14 | 38 |
endoderm of foregut | 3.14e-14 | 38 |
respiratory system | 5.38e-13 | 74 |
respiratory tract | 4.70e-12 | 54 |
segment of respiratory tract | 6.66e-12 | 47 |
endoderm-derived structure | 1.75e-11 | 160 |
endoderm | 1.75e-11 | 160 |
presumptive endoderm | 1.75e-11 | 160 |
upper respiratory tract | 2.28e-08 | 19 |
transitional epithelium | 2.92e-08 | 6 |
extraembryonic membrane | 5.71e-08 | 14 |
membranous layer | 5.71e-08 | 14 |
lower respiratory tract epithelium | 2.35e-07 | 3 |
epithelium of bronchus | 2.35e-07 | 3 |
foregut | 2.47e-07 | 87 |
digestive system | 7.00e-07 | 145 |
digestive tract | 7.00e-07 | 145 |
primitive gut | 7.00e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.31e-24 | 106 |
cell type cancer | 1.39e-16 | 143 |
squamous cell carcinoma | 7.50e-14 | 14 |
cancer | 2.07e-11 | 235 |
disease of cellular proliferation | 7.05e-11 | 239 |