FFCP PHASE1:Hg19::chr12:52886515..52886548,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:52886515..52886548,-
|short_description=p4@KRT6A
|description=CAGE_peak_4_at_KRT6A_5end
|association_with_transcript=-22bp_to_ENST00000549898_5end
|Entre...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3853 | |EntrezGene=3853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6443 | |HGNC=6443 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000549898_5end | |||
|cluster_id=chr12:52886515..52886548,- | |||
|coexpression_cluster_id=C594 | |||
|description=CAGE_peak_4_at_KRT6A_5end | |||
|id=chr12:52886515..52886548,- | |||
|ontology_enrichment_celltype=CL:0002076!8.16e-26!43;CL:0002368!3.72e-22!13;CL:0000066!4.94e-18!254;CL:0002159!7.12e-18!13;CL:0000223!2.91e-17!59;CL:0002202!1.87e-12!9;CL:0002632!1.87e-12!9;CL:0000244!5.50e-12!4;CL:0000731!5.50e-12!4;CL:0002328!8.43e-11!3;CL:0002077!1.27e-10!33;CL:0000068!5.05e-10!3;CL:0000069!5.05e-10!3;CL:0000307!5.05e-10!3;CL:0000377!5.05e-10!3;CL:0000622!5.25e-10!5;CL:0002621!6.82e-10!3;CL:0002251!6.98e-10!21;CL:0002541!1.31e-09!3;CL:0002623!1.35e-09!3;CL:0002166!1.71e-09!3;CL:0000240!1.71e-08!6;CL:0000311!1.71e-08!6;CL:0000079!1.71e-08!6;CL:0000237!1.71e-08!6;CL:0000036!1.71e-08!6;CL:0000357!1.71e-08!6;CL:0000114!1.71e-08!6;CL:0000154!2.47e-08!6;CL:0000575!2.35e-07!2;CL:0002327!2.57e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;6.34e-29;13!CL:0002076;1.57e-25;42!CL:0002159;2.38e-17;14!CL:0002202;3.80e-16;9!CL:0002632;3.80e-16;9!CL:0002328;1.11e-13;3!CL:0000622;8.19e-13;5!CL:0000307;1.21e-12;3!CL:0002621;1.72e-12;3!CL:0002623;3.76e-12;3!CL:0002251;3.16e-11;20!CL:0000240;6.18e-11;6!CL:0000311;6.18e-11;6!CL:0000079;6.18e-11;6!CL:0000237;6.18e-11;6!CL:0000154;1.09e-10;6!CL:0002077;7.68e-10;34!CL:0000349;1.99e-09;19!CL:0000244;2.43e-09;4!CL:0000731;2.43e-09;4!CL:0000575;3.76e-09;2!CL:0000312;4.87e-08;5!CL:0000362;1.49e-07;9!CL:0000150;3.86e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.20e-32,42;CL:0002368,5.99e-29,13;CL:0000223,2.93e-22,58;CL:0002159,2.28e-17,14;CL:0002202,3.71e-16,9;CL:0002632,3.71e-16,9;CL:0000066,8.09e-15,253;CL:0002328,1.11e-13,3;CL:0000622,9.28e-13,5;CL:0000068,1.16e-12,3;CL:0000069,1.16e-12,3;CL:0000307,1.16e-12,3;CL:0000377,1.16e-12,3;CL:0002621,1.72e-12,3;CL:0002623,4.22e-12,3;CL:0002077,8.25e-12,34;CL:0002251,3.42e-11,20;CL:0000240,7.41e-11,6;CL:0000311,7.41e-11,6;CL:0000079,7.41e-11,6;CL:0000237,7.41e-11,6;CL:0000036,7.41e-11,6;CL:0000357,7.41e-11,6;CL:0000114,7.41e-11,6;CL:0000154,1.20e-10,6;CL:0000349,2.24e-09,19;CL:0000244,2.29e-09,4;CL:0000731,2.29e-09,4;CL:0000575,3.62e-09,2;CL:0000312,5.35e-08,5;CL:0002321,1.11e-07,250;CL:0000362,1.62e-07,9;CL:0000150,4.13e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.17e-12;58!CL:0000377;1.21e-12;3!CL:0000357;6.18e-11;6!CL:0000114;6.18e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.87e-19!14;UBERON:0000158!2.87e-19!14;UBERON:0003124!8.48e-15!7;UBERON:0001004!5.60e-13!72;UBERON:0000478!1.26e-12!24;UBERON:0000166!3.42e-12!21;UBERON:0004815!8.43e-11!3;UBERON:0002031!8.43e-11!3;UBERON:0004119!1.34e-10!169;UBERON:0000925!1.34e-10!169;UBERON:0006595!1.34e-10!169;UBERON:0000165!1.88e-10!28;UBERON:0000930!1.88e-10!28;UBERON:0007196!4.17e-10!14;UBERON:0001558!4.17e-10!14;UBERON:0001949!6.82e-10!3;UBERON:0000161!1.24e-09!35;UBERON:0000476!1.31e-09!3;UBERON:0000920!1.31e-09!3;UBERON:0000365!1.36e-09!5;UBERON:0002185!3.55e-08!4;UBERON:0005910!5.38e-08!6;UBERON:0000065!5.85e-08!53;UBERON:0003102!1.34e-07!95;UBERON:0001444!1.55e-07!48;UBERON:0001911!2.57e-07!4;UBERON:0005333!2.57e-07!4;UBERON:0008425!2.57e-07!4;UBERON:0005311!2.57e-07!4;UBERON:0001708!3.26e-07!4;UBERON:0001704!3.26e-07!4;UBERON:0001987!3.33e-07!4;UBERON:0004340!3.33e-07!4;UBERON:0003126!4.87e-07!7;UBERON:0001005!4.87e-07!7;UBERON:0000305!5.91e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.11e-13;3!UBERON:0002031;1.11e-13;3!UBERON:0001949;1.72e-12;3!UBERON:0000486;3.28e-11;12!UBERON:0005631;8.06e-10;10!UBERON:0000158;8.06e-10;10!UBERON:0000165;1.11e-09;28!UBERON:0007196;2.10e-09;15!UBERON:0001558;2.10e-09;15!UBERON:0000478;2.35e-09;24!UBERON:0002185;2.32e-08;5!UBERON:0000365;1.48e-07;5!UBERON:0001041;7.23e-07;14!UBERON:0000161;8.48e-07;19!UBERON:0000166;8.48e-07;19!UBERON:0005911;9.25e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.11e-13,3;UBERON:0002031,1.11e-13,3;UBERON:0005631,4.36e-13,14;UBERON:0000158,4.36e-13,14;UBERON:0001004,5.87e-13,74;UBERON:0001949,1.72e-12,3;UBERON:0004119,2.11e-12,160;UBERON:0000925,2.11e-12,160;UBERON:0006595,2.11e-12,160;UBERON:0000166,3.75e-10,22;UBERON:0003102,8.00e-10,99;UBERON:0003124,1.79e-09,7;UBERON:0007196,2.07e-09,15;UBERON:0001558,2.07e-09,15;UBERON:0000478,2.54e-09,24;UBERON:0000165,3.00e-09,29;UBERON:0000930,3.00e-09,29;UBERON:0000153,3.96e-09,62;UBERON:0007811,3.96e-09,62;UBERON:0000161,5.55e-09,36;UBERON:0000033,6.16e-09,56;UBERON:0002185,2.32e-08,5;UBERON:0000065,4.13e-08,54;UBERON:0000365,1.42e-07,5;UBERON:0001444,1.98e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1136334692682,9.93979531968225,7.39508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27865759463288,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,4.09119180886252,3.72845974005705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03626569747441,6.74410519545717,3.01586917234893,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,2.68771405118175,3.40260233381728,0.985143749731331,2.3250715081117,5.75074018747817,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,8.48757200049526,0,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6065841139427,4.23572549105123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20048196829217,0,0,0,0,0,0,0,0,0,3.14041339185858,1.92190067365106,1.02090169995667,3.94515345336645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,4.13755084719702,4.69211592875051,2.17781969722645,0,1.29151611801369,3.36942951335251,4.43430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05865624054073,0,4.91457123358771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,1.76985594558733,0,0,0,0,6.06102203490647,0.274792780205587,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,4.07353869251362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81843360035278,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24329698497822,2.0486217251274,4.83881763269864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0,0,20.2476575544174,2.05339980651169,0.404112318087525,0.430333232356058,0,0,0,0,0,2.34640942403454,0,3.25516942652591,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1136334692682,9.93979531968225,7.39508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27865759463288,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,4.09119180886252,3.72845974005705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03626569747441,6.74410519545717,3.01586917234893,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,2.68771405118175,3.40260233381728,0.985143749731331,2.3250715081117,5.75074018747817,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,8.48757200049526,0,2.11673205330776,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6065841139427,4.23572549105123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20048196829217,0,0,0,0,0,0,0,0,0,3.14041339185858,1.92190067365106,1.02090169995667,3.94515345336645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,4.13755084719702,4.69211592875051,2.17781969722645,0,1.29151611801369,3.36942951335251,4.43430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05865624054073,0,4.91457123358771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,1.39423744278603,1.76985594558733,0,0,0,0,6.06102203490647,0.274792780205587,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0,0,0,4.07353869251362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81843360035278,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24329698497822,2.0486217251274,4.83881763269864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0,0,0,0,20.2476575544174,2.05339980651169,0.404112318087525,0.430333232356058,0,0,0,0,0,2.34640942403454,0,3.25516942652591,0,0,0 | ||
|short_description=p4@KRT6A | |||
}} | }} |
Latest revision as of 22:53, 18 September 2015
Short description: | p4@KRT6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KRT6A_5end |
Coexpression cluster: | C594_Keratinocyte_Placental_amniotic_Esophageal_tongue_Corneal_Prostate |
Association with transcript: | -22bp_to_ENST00000549898_5end |
EntrezGene: | KRT6A |
HGNC: | 6443 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.11e-13 | 3 |
epithelium of bronchus | 1.11e-13 | 3 |
extraembryonic membrane | 4.36e-13 | 14 |
membranous layer | 4.36e-13 | 14 |
respiratory system | 5.87e-13 | 74 |
gingival epithelium | 1.72e-12 | 3 |
endoderm-derived structure | 2.11e-12 | 160 |
endoderm | 2.11e-12 | 160 |
presumptive endoderm | 2.11e-12 | 160 |
oral opening | 3.75e-10 | 22 |
surface structure | 8.00e-10 | 99 |
chorion | 1.79e-09 | 7 |
tracheobronchial tree | 2.07e-09 | 15 |
lower respiratory tract | 2.07e-09 | 15 |
extraembryonic structure | 2.54e-09 | 24 |
mouth | 3.00e-09 | 29 |
stomodeum | 3.00e-09 | 29 |
anterior region of body | 3.96e-09 | 62 |
craniocervical region | 3.96e-09 | 62 |
orifice | 5.55e-09 | 36 |
head | 6.16e-09 | 56 |
bronchus | 2.32e-08 | 5 |
respiratory tract | 4.13e-08 | 54 |
urothelium | 1.42e-07 | 5 |
subdivision of head | 1.98e-07 | 49 |