FFCP PHASE1:Hg19::chr12:52911397..52911445,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:52911397..52911445,-
|short_description=p5@KRT5
|description=CAGE_peak_5_at_KRT5_5end
|association_with_transcript=226bp_to_ENST00000549511_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3852 | |EntrezGene=3852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6442 | |HGNC=6442 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=226bp_to_ENST00000549511_5end | |||
|cluster_id=chr12:52911397..52911445,- | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_5_at_KRT5_5end | |||
|id=chr12:52911397..52911445,- | |||
|ontology_enrichment_celltype=CL:0002076!1.33e-29!43;CL:0000223!4.99e-21!59;CL:0002251!8.25e-18!21;CL:0000066!3.13e-17!254;CL:0002159!3.34e-17!13;CL:0002368!5.66e-17!13;CL:0000622!1.68e-12!5;CL:0000154!2.53e-10!6;CL:0000076!3.34e-10!62;CL:0000244!1.05e-09!4;CL:0000731!1.05e-09!4;CL:0002202!1.16e-09!9;CL:0002632!1.16e-09!9;CL:0002328!1.77e-08!3;CL:0000068!3.35e-08!3;CL:0000069!3.35e-08!3;CL:0000307!3.35e-08!3;CL:0000377!3.35e-08!3;CL:0002623!3.76e-08!3;CL:0002077!9.79e-08!33;CL:0000362!1.14e-07!8;CL:0002166!1.15e-07!3;CL:0002621!1.17e-07!3;CL:0000240!6.99e-07!6;CL:0000311!6.99e-07!6;CL:0000079!6.99e-07!6;CL:0000237!6.99e-07!6;CL:0000036!6.99e-07!6;CL:0000357!6.99e-07!6;CL:0000114!6.99e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.04e-24;13!CL:0002076;3.46e-23;42!CL:0002159;1.30e-22;14!CL:0000622;3.28e-17;5!CL:0000154;2.80e-14;6!CL:0002202;1.22e-13;9!CL:0002632;1.22e-13;9!CL:0000244;2.98e-13;4!CL:0000731;2.98e-13;4!CL:0002251;5.53e-12;20!CL:0002328;1.77e-11;3!CL:0000307;4.11e-11;3!CL:0002623;5.28e-11;3!CL:0002621;2.37e-10;3!CL:0002166;2.49e-10;3!CL:0002077;4.82e-10;34!CL:0000240;1.61e-09;6!CL:0000311;1.61e-09;6!CL:0000079;1.61e-09;6!CL:0000237;1.61e-09;6!CL:0000362;1.70e-09;9!CL:0000150;2.20e-09;9!CL:0000575;2.98e-08;2!CL:0000317;6.50e-08;2!CL:1000448;6.50e-08;2!CL:0002308;6.50e-08;2!CL:0002140;6.50e-08;2!CL:0002327;7.96e-08;4!CL:0000312;7.34e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.70e-30,42;CL:0002368,3.28e-24,13;CL:0002159,1.24e-22,14;CL:0000066,1.38e-20,253;CL:0000223,4.43e-20,58;CL:0000622,2.88e-17,5;CL:0000154,2.51e-14,6;CL:0002202,1.23e-13,9;CL:0002632,1.23e-13,9;CL:0000244,2.98e-13,4;CL:0000731,2.98e-13,4;CL:0002251,5.68e-12,20;CL:0002077,1.69e-11,34;CL:0002328,1.71e-11,3;CL:0000068,4.25e-11,3;CL:0000069,4.25e-11,3;CL:0000307,4.25e-11,3;CL:0000377,4.25e-11,3;CL:0002623,5.03e-11,3;CL:0002166,2.49e-10,3;CL:0002621,2.57e-10,3;CL:0000362,1.66e-09,9;CL:0000240,1.66e-09,6;CL:0000311,1.66e-09,6;CL:0000079,1.66e-09,6;CL:0000237,1.66e-09,6;CL:0000036,1.66e-09,6;CL:0000357,1.66e-09,6;CL:0000114,1.66e-09,6;CL:0000150,2.05e-09,9;CL:0000575,2.93e-08,2;CL:0000076,4.72e-08,63;CL:0000317,5.98e-08,2;CL:1000448,5.98e-08,2;CL:0002308,5.98e-08,2;CL:0002140,5.98e-08,2;CL:0002327,7.96e-08,4;CL:0000312,7.48e-07,5;CL:0002321,8.57e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;4.11e-11;3!CL:0000223;4.95e-11;58!CL:0000357;1.61e-09;6!CL:0000114;1.61e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!1.09e-15!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.51e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.54e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000166!2.81e-20!21;UBERON:0001004!4.33e-18!72;UBERON:0000161!1.13e-17!35;UBERON:0000165!1.81e-16!28;UBERON:0000930!1.81e-16!28;UBERON:0004119!6.46e-15!169;UBERON:0000925!6.46e-15!169;UBERON:0006595!6.46e-15!169;UBERON:0003102!4.26e-12!95;UBERON:0000365!3.56e-11!5;UBERON:0003729!8.04e-11!5;UBERON:0001444!1.32e-10!48;UBERON:0007196!1.17e-09!14;UBERON:0001558!1.17e-09!14;UBERON:0003408!1.21e-09!10;UBERON:0001044!2.50e-09!6;UBERON:0003293!2.50e-09!6;UBERON:0003294!2.50e-09!6;UBERON:0010047!2.50e-09!6;UBERON:0000167!2.50e-09!6;UBERON:0005910!3.10e-09!6;UBERON:0000974!3.72e-09!10;UBERON:0000065!4.44e-09!53;UBERON:0003343!1.08e-08!4;UBERON:0004785!1.08e-08!4;UBERON:0004815!1.77e-08!3;UBERON:0002031!1.77e-08!3;UBERON:0001007!2.10e-08!155;UBERON:0001555!2.10e-08!155;UBERON:0007026!2.10e-08!155;UBERON:0000078!2.25e-08!18;UBERON:0006562!2.53e-08!11;UBERON:0003126!5.18e-08!7;UBERON:0001005!5.18e-08!7;UBERON:0000344!1.05e-07!12;UBERON:0001949!1.17e-07!3;UBERON:0001723!2.33e-07!3;UBERON:0001033!2.33e-07!3;UBERON:0010056!2.33e-07!3;UBERON:0000077!4.65e-07!130;UBERON:0001042!6.04e-07!10;UBERON:0009145!6.04e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.54e-12;12!UBERON:0000165;6.44e-12;28!UBERON:0004815;1.77e-11;3!UBERON:0002031;1.77e-11;3!UBERON:0000365;1.31e-10;5!UBERON:0001949;2.37e-10;3!UBERON:0000161;8.71e-10;19!UBERON:0000166;8.71e-10;19!UBERON:0005910;7.62e-09;6!UBERON:0002419;6.50e-08;2!UBERON:0007771;6.50e-08;2!UBERON:0003297;6.50e-08;2!UBERON:0001821;6.50e-08;2!UBERON:0003487;6.50e-08;2!UBERON:0001820;6.50e-08;2!UBERON:0007196;7.35e-08;15!UBERON:0001558;7.35e-08;15!UBERON:0001708;7.59e-08;4!UBERON:0008895;7.59e-08;4!UBERON:0001911;7.96e-08;4!UBERON:0001003;1.11e-07;15!UBERON:0007376;1.11e-07;15!UBERON:0010371;4.05e-07;31!UBERON:0002185;5.15e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.74e-14,99;UBERON:0000166,6.29e-13,22;UBERON:0001004,8.48e-13,74;UBERON:0004119,1.31e-11,160;UBERON:0000925,1.31e-11,160;UBERON:0006595,1.31e-11,160;UBERON:0004815,1.71e-11,3;UBERON:0002031,1.71e-11,3;UBERON:0000165,2.14e-11,29;UBERON:0000930,2.14e-11,29;UBERON:0000033,3.51e-11,56;UBERON:0000153,4.32e-11,62;UBERON:0007811,4.32e-11,62;UBERON:0000365,1.31e-10,5;UBERON:0000161,1.80e-10,36;UBERON:0001949,2.57e-10,3;UBERON:0005910,7.62e-09,6;UBERON:0001444,1.66e-08,49;UBERON:0002419,5.98e-08,2;UBERON:0007771,5.98e-08,2;UBERON:0003297,5.98e-08,2;UBERON:0001821,5.98e-08,2;UBERON:0003487,5.98e-08,2;UBERON:0001820,5.98e-08,2;UBERON:0005089,5.98e-08,2;UBERON:0005088,5.98e-08,2;UBERON:0007196,7.35e-08,15;UBERON:0001558,7.35e-08,15;UBERON:0001708,7.59e-08,4;UBERON:0008895,7.59e-08,4;UBERON:0001911,7.96e-08,4;UBERON:0005333,7.96e-08,4;UBERON:0008425,7.96e-08,4;UBERON:0005311,7.96e-08,4;UBERON:0001003,1.09e-07,15;UBERON:0007376,1.09e-07,15;UBERON:0007383,1.09e-07,15;UBERON:0000065,2.03e-07,54;UBERON:0005631,3.05e-07,14;UBERON:0000158,3.05e-07,14;UBERON:0002185,5.05e-07,5 | |||
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| ||
|short_description=p5@KRT5 | |||
}} | }} |
Latest revision as of 23:28, 18 September 2015
Short description: | p5@KRT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KRT5_5end |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | 226bp_to_ENST00000549511_5end |
EntrezGene: | KRT5 |
HGNC: | 6442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.54e-07 | 14 |