FFCP PHASE1:Hg19::chr1:163025442..163025452,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:163025442..163025452,- | |||
|coexpression_cluster_id=C3896 | |||
|description=CAGE_peak_at_chr1:163025442..163025452,- | |description=CAGE_peak_at_chr1:163025442..163025452,- | ||
|id=chr1:163025442..163025452,- | |id=chr1:163025442..163025452,- | ||
|ontology_enrichment_celltype=CL:0000167!9.92e-13!1;CL:0000164!9.92e-13!1;CL:0000502!9.92e-13!1;CL:0000172!9.92e-13!1;CL:0000173!9.92e-13!1;CL:0002351!9.92e-13!1;CL:0002563!4.83e-12!4;CL:0002253!6.07e-07!2;CL:0002535!6.80e-07!2;CL:0000242!7.20e-07!2 | |ontology_enrichment_celltype=CL:0000167!9.92e-13!1;CL:0000164!9.92e-13!1;CL:0000502!9.92e-13!1;CL:0000172!9.92e-13!1;CL:0000173!9.92e-13!1;CL:0002351!9.92e-13!1;CL:0002563!4.83e-12!4;CL:0002253!6.07e-07!2;CL:0002535!6.80e-07!2;CL:0000242!7.20e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000167;5.05e-34;1!CL:0000164;5.05e-34;1!CL:0000502;5.05e-34;1!CL:0000172;5.05e-34;1!CL:0000173;5.05e-34;1!CL:0002253;1.27e-17;2!CL:0000083;1.22e-09;4!CL:0002563;1.70e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,5.05e-34,1;CL:0000164,5.05e-34,1;CL:0000502,5.05e-34,1;CL:0000172,5.05e-34,1;CL:0000173,5.05e-34,1;CL:0002351,5.05e-34,1;CL:0002253,1.27e-17,2;CL:0000083,1.22e-09,4;CL:0002563,1.70e-09,4 | |||
|ontology_enrichment_development_v019=CL:0002351;5.05e-34;1 | |||
|ontology_enrichment_disease=DOID:3119!3.97e-13!14;DOID:4430!9.92e-13!1;DOID:5409!4.09e-12!4;DOID:169!1.80e-08!6;DOID:0050687!5.86e-08!143;DOID:1325!2.69e-07!7;DOID:3904!2.69e-07!7;DOID:4074!4.83e-07!2;DOID:4905!4.83e-07!2;DOID:3498!4.83e-07!2 | |ontology_enrichment_disease=DOID:3119!3.97e-13!14;DOID:4430!9.92e-13!1;DOID:5409!4.09e-12!4;DOID:169!1.80e-08!6;DOID:0050687!5.86e-08!143;DOID:1325!2.69e-07!7;DOID:3904!2.69e-07!7;DOID:4074!4.83e-07!2;DOID:4905!4.83e-07!2;DOID:3498!4.83e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4430;5.05e-34;1!DOID:3119;8.27e-22;14!DOID:4074;6.48e-18;2!DOID:4905;6.48e-18;2!DOID:3498;6.48e-18;2!DOID:5409;1.12e-09;4!DOID:1793;1.22e-09;4!DOID:170;7.58e-07;6!DOID:169;8.48e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.05e-34,1;DOID:3119,8.27e-22,14;DOID:4074,6.48e-18,2;DOID:4905,6.48e-18,2;DOID:3498,6.48e-18,2;DOID:5409,1.12e-09,4;DOID:1793,1.22e-09,4;DOID:0050687,1.02e-08,143;DOID:170,7.58e-07,6;DOID:169,8.48e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001874!2.46e-12!1;UBERON:0007190!4.31e-12!1;UBERON:0001242!4.83e-12!4;UBERON:0001262!4.83e-12!4;UBERON:0004786!4.83e-12!4;UBERON:0004808!4.83e-12!4;UBERON:0001277!4.83e-12!4;UBERON:0003350!8.13e-10!5;UBERON:0000200!3.63e-08!6;UBERON:0006955!6.80e-07!2;UBERON:0004801!6.80e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.70e-09;4!UBERON:0001242;1.70e-09;4!UBERON:0001262;1.70e-09;4!UBERON:0004786;1.70e-09;4!UBERON:0004808;1.70e-09;4!UBERON:0001277;1.70e-09;4!UBERON:0004907;7.49e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.70e-09,4;UBERON:0001242,1.70e-09,4;UBERON:0001262,1.70e-09,4;UBERON:0004786,1.70e-09,4;UBERON:0004808,1.70e-09,4;UBERON:0001277,1.70e-09,4;UBERON:0004907,7.49e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06846023944879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94749775767882,0,0,0,0,0,0,0,0,0,0,0,4.37004683161367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,5.43466236840025,0,0,2.35158648180761,0,2.12108892391463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06846023944879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94749775767882,0,0,0,0,0,0,0,0,0,0,0,4.37004683161367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943595651135378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,5.43466236840025,0,0,2.35158648180761,0,2.12108892391463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:163025442..163025452,- | |short_description=p@chr1:163025442..163025452,- | ||
}} | }} |
Latest revision as of 23:45, 27 July 2015
Short description: | p@chr1:163025442..163025452, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:163025442..163025452, - |
Coexpression cluster: | C3896_small_ductal_carcinoid_smallcell_somatostatinoma_colon_gastrointestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 5.05e-34 | 1 |
enteroendocrine cell | 5.05e-34 | 1 |
type D enteroendocrine cell | 5.05e-34 | 1 |
somatostatin secreting cell | 5.05e-34 | 1 |
pancreatic D cell | 5.05e-34 | 1 |
progenitor cell of endocrine pancreas | 5.05e-34 | 1 |
epithelial cell of large intestine | 1.27e-17 | 2 |
epithelial cell of pancreas | 1.22e-09 | 4 |
intestinal epithelial cell | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.70e-09 | 4 |
intestinal mucosa | 1.70e-09 | 4 |
wall of intestine | 1.70e-09 | 4 |
gastrointestinal system mucosa | 1.70e-09 | 4 |
gastrointestinal system epithelium | 1.70e-09 | 4 |
intestinal epithelium | 1.70e-09 | 4 |
lower digestive tract | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.05e-34 | 1 |
gastrointestinal system cancer | 8.27e-22 | 14 |
pancreas adenocarcinoma | 6.48e-18 | 2 |
pancreatic carcinoma | 6.48e-18 | 2 |
pancreatic ductal adenocarcinoma | 6.48e-18 | 2 |
lung small cell carcinoma | 1.12e-09 | 4 |
pancreatic cancer | 1.22e-09 | 4 |
cell type cancer | 1.02e-08 | 143 |
endocrine gland cancer | 7.58e-07 | 6 |
neuroendocrine tumor | 8.48e-07 | 6 |