FFCP PHASE1:Hg19::chr1:166136036..166136047,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149297 | |EntrezGene=149297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13495 | |HGNC=13495 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_uc010plc.1_5end | |association_with_transcript=-59bp_to_uc010plc.1_5end | ||
|cluster_id=chr1:166136036..166136047,- | |||
|description=CAGE_peak_4_at_FAM78B_5end | |description=CAGE_peak_4_at_FAM78B_5end | ||
|id=chr1:166136036..166136047,- | |id=chr1:166136036..166136047,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;5.49e-09;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;3.28e-11;1!DOID:0050177;3.28e-11;1!DOID:0060060;3.28e-11;1!DOID:0060061;3.28e-11;1!DOID:0050427;3.28e-11;1!DOID:8691;3.28e-11;1!DOID:169;1.25e-07;6!DOID:3095;1.29e-07;22!DOID:2994;1.29e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.42e-11,1;DOID:0060061,2.42e-11,1;DOID:8691,2.42e-11,1;DOID:630,2.68e-11,1;DOID:0050177,2.68e-11,1;DOID:0050427,2.68e-11,1;DOID:3095,1.42e-07,22;DOID:2994,1.42e-07,22;DOID:169,1.43e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.65e-19!94;UBERON:0001016!2.65e-19!94;UBERON:0001893!1.37e-18!34;UBERON:0001869!1.50e-18!32;UBERON:0005743!4.48e-18!86;UBERON:0002791!1.71e-17!33;UBERON:0002780!3.71e-17!41;UBERON:0001890!3.71e-17!41;UBERON:0006240!3.71e-17!41;UBERON:0002020!6.41e-17!34;UBERON:0003528!6.41e-17!34;UBERON:0000955!8.49e-17!69;UBERON:0006238!8.49e-17!69;UBERON:0003080!1.53e-16!42;UBERON:0001017!3.11e-16!82;UBERON:0001049!3.73e-16!57;UBERON:0005068!3.73e-16!57;UBERON:0006241!3.73e-16!57;UBERON:0007135!3.73e-16!57;UBERON:0000956!7.79e-16!25;UBERON:0000203!7.79e-16!25;UBERON:0001950!2.76e-15!20;UBERON:0002616!2.96e-15!59;UBERON:0002619!3.44e-15!22;UBERON:0003075!9.07e-14!86;UBERON:0007284!9.07e-14!86;UBERON:0003056!1.05e-13!61;UBERON:0002346!1.96e-13!90;UBERON:0004121!3.37e-11!169;UBERON:0000924!3.97e-11!173;UBERON:0006601!3.97e-11!173;UBERON:0000033!5.22e-10!123;UBERON:0007023!1.17e-09!115;UBERON:0000153!1.49e-09!129;UBERON:0007811!1.49e-09!129;UBERON:0000200!1.52e-07!6;UBERON:0001871!2.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.88e-09;10!UBERON:0000013;5.49e-09;5!UBERON:0002410;5.49e-09;5!UBERON:0002021;7.85e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.11e-09,10;UBERON:0000358,2.11e-09,10;UBERON:0000307,2.11e-09,10;UBERON:0000091,2.11e-09,10;UBERON:0000087,2.11e-09,10;UBERON:0007010,2.11e-09,10;UBERON:0007806,2.11e-09,10;UBERON:0008780,2.11e-09,10;UBERON:0005728,2.11e-09,10;UBERON:0000013,6.44e-09,5;UBERON:0002410,6.44e-09,5;UBERON:0002021,8.50e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.687720651731561,0.738905305049512,0.708397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.392937226493138,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,2.34434894420094,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.650756789328606,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,1.13654458722565,0,0,0,1.9882952955326,0.703347082052564,0.111308705022906,0,0.211125408127993,0,0.276283915531148,0.251932747854276,0,1.10776324914963,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0.552896299656123,0,0,0.10893846351899,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.176915129006678,0,1.48260564340311,1.11207545051853,1.25306339406546,0.269604531922708,0,0,0,0,0.242780379534093,0,0,0.61214552326098,0,0.150323419414493,0,0,0.992975867626496,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0,0.443175571691151,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0.272406812223151,0.482259445395058,0.550157746388935,0.415440338029185,0,0,0.485996453264197,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0,0,0,0,0.157204305099666,0,0,3.35939774226505,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.3755727921195,0,0,0.310482014706917,0.553394539744923,0.37494122388632,1.97143852804142,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,1.79988656269437,0.320075189082423,0,0,0.184105950251841,0,0.622077260032973,1.02315497042921,2.69562028491704,0,0.436838552768056,0,0.212574920101683,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0,1.23069818544453,0.504143392443436,0.622415272177961,0,0,0,0.11796972334774,0,0,0,0.690359926060101,0.198916222116275,0,0,0,0,0,0,0.810451015420736,0,0.413373593002368,0.443910671357348,0,0,0,0,0,2.14280734351315,0,0,0.455324382702595,0,0,0,0.0679697329768317,0.789273282754189,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0.94808167039636,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,2.6385724018903,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0.499705779624645,0,0.705789743431384,0.0802413666891683,0,0,0,0,0.475940431336403,0.436350690340377,0,0,0,0.432626562123789,0,0,3.92765353135455,0.101988829741982,0.534434810531121,2.11358268930143,0,0.151557396436479,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.687720651731561,0.738905305049512,0.708397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.392937226493138,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,2.34434894420094,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.650756789328606,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0,0,0,0.330569830721956,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.222886768554957,1.13654458722565,0,0,0,1.9882952955326,0.703347082052564,0.111308705022906,0,0.211125408127993,0,0.276283915531148,0.251932747854276,0,1.10776324914963,0,0,0,0,0.295930216910801,0,0,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0.241192877250816,0,0.552896299656123,0,0,0.10893846351899,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.176915129006678,0,1.48260564340311,1.11207545051853,1.25306339406546,0.269604531922708,0,0,0,0,0.242780379534093,0,0,0.61214552326098,0,0.150323419414493,0,0,0.992975867626496,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0,0.443175571691151,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0.272406812223151,0.482259445395058,0.550157746388935,0.415440338029185,0,0,0.485996453264197,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0,0,0,0,0.157204305099666,0,0,3.35939774226505,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.3755727921195,0,0,0.310482014706917,0.553394539744923,0.37494122388632,1.97143852804142,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,1.79988656269437,0.320075189082423,0,0,0.184105950251841,0,0.622077260032973,1.02315497042921,2.69562028491704,0,0.436838552768056,0,0.212574920101683,0,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0,1.23069818544453,0.504143392443436,0.622415272177961,0,0,0,0.11796972334774,0,0,0,0.690359926060101,0.198916222116275,0,0,0,0,0,0,0.810451015420736,0,0.413373593002368,0.443910671357348,0,0,0,0,0,2.14280734351315,0,0,0.455324382702595,0,0,0,0.0679697329768317,0.789273282754189,0,0,0.156986185701028,0.157115589916002,0,0,0,0,0.214429632529969,0.94808167039636,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,2.6385724018903,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0.499705779624645,0,0.705789743431384,0.0802413666891683,0,0,0,0,0.475940431336403,0.436350690340377,0,0,0,0.432626562123789,0,0,3.92765353135455,0.101988829741982,0.534434810531121,2.11358268930143,0,0.151557396436479,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | ||
|short_description=p4@FAM78B | |short_description=p4@FAM78B | ||
}} | }} |
Latest revision as of 10:26, 18 September 2015
Short description: | p4@FAM78B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM78B_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_uc010plc.1_5end |
EntrezGene: | FAM78B |
HGNC: | 13495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.11e-09 | 10 |
blastocyst | 2.11e-09 | 10 |
blastula | 2.11e-09 | 10 |
bilaminar disc | 2.11e-09 | 10 |
inner cell mass | 2.11e-09 | 10 |
cleaving embryo | 2.11e-09 | 10 |
connecting stalk | 2.11e-09 | 10 |
inner cell mass derived epiblast | 2.11e-09 | 10 |
extraembryonic mesoderm | 2.11e-09 | 10 |
sympathetic nervous system | 6.44e-09 | 5 |
autonomic nervous system | 6.44e-09 | 5 |
occipital lobe | 8.50e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.42e-11 | 1 |
cutaneous T cell lymphoma | 2.42e-11 | 1 |
mycosis fungoides | 2.42e-11 | 1 |
genetic disease | 2.68e-11 | 1 |
monogenic disease | 2.68e-11 | 1 |
xeroderma pigmentosum | 2.68e-11 | 1 |
germ cell and embryonal cancer | 1.42e-07 | 22 |
germ cell cancer | 1.42e-07 | 22 |
neuroendocrine tumor | 1.43e-07 | 6 |