FFCP PHASE1:Hg19::chr1:19522637..19522659,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:19522637..19522659,- | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_at_chr1:19522637..19522659,- | |description=CAGE_peak_at_chr1:19522637..19522659,- | ||
|id=chr1:19522637..19522659,- | |id=chr1:19522637..19522659,- | ||
|ontology_enrichment_celltype=CL:0002563!2.58e-14!4;CL:0002557!2.75e-14!1;CL:0002253!3.56e-08!2 | |ontology_enrichment_celltype=CL:0002563!2.58e-14!4;CL:0002557!2.75e-14!1;CL:0002253!3.56e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002253;2.74e-50;2!CL:0000746;5.96e-34;3!CL:0002563;5.56e-26;4!CL:0000737;7.14e-26;4!CL:0002494;1.54e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.74e-50,2;CL:0000746,5.96e-34,3;CL:0000513,5.96e-34,3;CL:0002563,5.56e-26,4;CL:0000737,7.14e-26,4;CL:0002494,1.54e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000513;5.96e-34;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001242!2.58e-14!4;UBERON:0001262!2.58e-14!4;UBERON:0004786!2.58e-14!4;UBERON:0004808!2.58e-14!4;UBERON:0001277!2.58e-14!4;UBERON:0000485!8.03e-14!9;UBERON:0003350!1.21e-11!5;UBERON:0007497!8.60e-08!2;UBERON:0003643!8.60e-08!2;UBERON:0003504!8.60e-08!2;UBERON:0003469!8.60e-08!2;UBERON:0003496!8.60e-08!2;UBERON:0004797!8.60e-08!2;UBERON:0002012!8.60e-08!2;UBERON:0008886!8.60e-08!2;UBERON:0007303!8.60e-08!2;UBERON:0002061!8.60e-08!2;UBERON:0005432!8.60e-08!2;UBERON:0004363!8.60e-08!2;UBERON:0001155!6.79e-07!9 | |ontology_enrichment_uberon=UBERON:0001242!2.58e-14!4;UBERON:0001262!2.58e-14!4;UBERON:0004786!2.58e-14!4;UBERON:0004808!2.58e-14!4;UBERON:0001277!2.58e-14!4;UBERON:0000485!8.03e-14!9;UBERON:0003350!1.21e-11!5;UBERON:0007497!8.60e-08!2;UBERON:0003643!8.60e-08!2;UBERON:0003504!8.60e-08!2;UBERON:0003469!8.60e-08!2;UBERON:0003496!8.60e-08!2;UBERON:0004797!8.60e-08!2;UBERON:0002012!8.60e-08!2;UBERON:0008886!8.60e-08!2;UBERON:0007303!8.60e-08!2;UBERON:0002061!8.60e-08!2;UBERON:0005432!8.60e-08!2;UBERON:0004363!8.60e-08!2;UBERON:0001155!6.79e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;5.56e-26;4!UBERON:0001242;5.56e-26;4!UBERON:0001262;5.56e-26;4!UBERON:0004786;5.56e-26;4!UBERON:0004808;5.56e-26;4!UBERON:0001277;5.56e-26;4!UBERON:0004907;4.21e-21;5!UBERON:0000485;1.65e-15;7!UBERON:0003929;1.65e-15;7!UBERON:0003350;9.39e-14;8!UBERON:0001155;2.19e-12;9!UBERON:0000059;2.16e-10;11!UBERON:0000160;7.18e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,5.56e-26,4;UBERON:0001242,5.56e-26,4;UBERON:0001262,5.56e-26,4;UBERON:0004786,5.56e-26,4;UBERON:0004808,5.56e-26,4;UBERON:0001277,5.56e-26,4;UBERON:0004907,4.21e-21,5;UBERON:0003350,9.39e-14,8;UBERON:0001155,2.19e-12,9;UBERON:0000485,2.19e-12,9;UBERON:0000059,2.16e-10,11;UBERON:0000160,7.18e-07,17 | |||
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|short_description=p@chr1:19522637..19522659,- | |short_description=p@chr1:19522637..19522659,- | ||
}} | }} |
Latest revision as of 01:46, 28 July 2015
Short description: | p@chr1:19522637..19522659, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:19522637..19522659, - |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.74e-50 | 2 |
cardiac muscle cell | 5.96e-34 | 3 |
cardiac muscle myoblast | 5.96e-34 | 3 |
intestinal epithelial cell | 5.56e-26 | 4 |
striated muscle cell | 7.14e-26 | 4 |
cardiocyte | 1.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
rectum | 5.56e-26 | 4 |
intestinal mucosa | 5.56e-26 | 4 |
wall of intestine | 5.56e-26 | 4 |
gastrointestinal system mucosa | 5.56e-26 | 4 |
gastrointestinal system epithelium | 5.56e-26 | 4 |
intestinal epithelium | 5.56e-26 | 4 |
lower digestive tract | 4.21e-21 | 5 |
epithelium of mucosa | 9.39e-14 | 8 |
colon | 2.19e-12 | 9 |
simple columnar epithelium | 2.19e-12 | 9 |
large intestine | 2.16e-10 | 11 |
intestine | 7.18e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |