FFCP PHASE1:Hg19::chr4:74765097..74765105,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:74765097..74765105,- | |||
|description=CAGE_peak_at_chr4:74765097..74765105,- | |description=CAGE_peak_at_chr4:74765097..74765105,- | ||
|id=chr4:74765097..74765105,- | |id=chr4:74765097..74765105,- | ||
|ontology_enrichment_celltype=CL:0000569!2.39e-37!4;CL:0000011!2.39e-37!4;CL:0002494!2.55e-20!16;CL:0000214!3.57e-13!3;CL:0002623!6.17e-13!3;CL:0000622!4.07e-08!5;CL:0000359!4.61e-07!32;CL:0000154!6.68e-07!6 | |ontology_enrichment_celltype=CL:0000569!2.39e-37!4;CL:0000011!2.39e-37!4;CL:0002494!2.55e-20!16;CL:0000214!3.57e-13!3;CL:0002623!6.17e-13!3;CL:0000622!4.07e-08!5;CL:0000359!4.61e-07!32;CL:0000154!6.68e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000569;1.08e-110;4!CL:0002494;1.29e-28;16!CL:0002593;8.10e-26;2!CL:0002595;3.42e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,8.91e-111,4;CL:0000011,8.91e-111,4;CL:0002494,1.23e-28,16;CL:0002593,9.18e-26,2;CL:0000333,2.75e-11,41;CL:0002595,3.60e-11,5;CL:0000133,3.25e-08,59;CL:0000221,6.51e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000011;1.08e-110;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000948!2.06e-13!24;UBERON:0005498!2.06e-13!24;UBERON:0004140!2.06e-13!24;UBERON:0009881!2.06e-13!24;UBERON:0004141!2.06e-13!24;UBERON:0003084!2.06e-13!24;UBERON:0007005!2.06e-13!24;UBERON:0004139!2.06e-13!24;UBERON:0004291!2.06e-13!24;UBERON:0006915!3.57e-13!3;UBERON:0002018!3.57e-13!3;UBERON:0002217!3.57e-13!3;UBERON:0007616!3.57e-13!3;UBERON:0007100!7.12e-12!27;UBERON:0002363!4.75e-10!1;UBERON:0007647!4.75e-10!1;UBERON:0010115!4.75e-10!1;UBERON:0004872!1.88e-09!84;UBERON:0004905!2.94e-08!5;UBERON:0000982!2.94e-08!5;UBERON:0004770!2.94e-08!5;UBERON:0001044!6.68e-07!6;UBERON:0003293!6.68e-07!6;UBERON:0003294!6.68e-07!6;UBERON:0010047!6.68e-07!6;UBERON:0000167!6.68e-07!6;UBERON:0004535!7.36e-07!110;UBERON:0004573!7.65e-07!33;UBERON:0004571!7.65e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;8.10e-26;2!UBERON:0000948;4.13e-21;22!UBERON:0007100;1.05e-18;25!UBERON:0003834;3.42e-11;5!UBERON:0001533;3.42e-11;5!UBERON:0003513;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,9.18e-26,2;UBERON:0000948,1.88e-19,24;UBERON:0005498,1.88e-19,24;UBERON:0004140,1.88e-19,24;UBERON:0009881,1.88e-19,24;UBERON:0004141,1.88e-19,24;UBERON:0003084,1.88e-19,24;UBERON:0007005,1.88e-19,24;UBERON:0004139,1.88e-19,24;UBERON:0004291,1.88e-19,24;UBERON:0007100,2.09e-17,27;UBERON:0003834,3.60e-11,5;UBERON:0001533,3.60e-11,5;UBERON:0004872,2.17e-10,83;UBERON:0003513,2.35e-08,7;UBERON:0004535,4.22e-08,109;UBERON:0001009,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0003103,1.88e-07,68 | |||
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|short_description=p@chr4:74765097..74765105,- | |short_description=p@chr4:74765097..74765105,- | ||
}} | }} |
Latest revision as of 06:46, 30 July 2015
Short description: | p@chr4:74765097..74765105, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74765097..74765105, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 8.91e-111 | 4 |
migratory trunk neural crest cell | 8.91e-111 | 4 |
cardiocyte | 1.23e-28 | 16 |
smooth muscle cell of the internal thoracic artery | 9.18e-26 | 2 |
migratory neural crest cell | 2.75e-11 | 41 |
smooth muscle cell of the subclavian artery | 3.60e-11 | 5 |
neurectodermal cell | 3.25e-08 | 59 |
ectodermal cell | 6.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 9.18e-26 | 2 |
heart | 1.88e-19 | 24 |
primitive heart tube | 1.88e-19 | 24 |
primary heart field | 1.88e-19 | 24 |
anterior lateral plate mesoderm | 1.88e-19 | 24 |
heart tube | 1.88e-19 | 24 |
heart primordium | 1.88e-19 | 24 |
cardiac mesoderm | 1.88e-19 | 24 |
cardiogenic plate | 1.88e-19 | 24 |
heart rudiment | 1.88e-19 | 24 |
primary circulatory organ | 2.09e-17 | 27 |
thoracic segment blood vessel | 3.60e-11 | 5 |
subclavian artery | 3.60e-11 | 5 |
splanchnic layer of lateral plate mesoderm | 2.17e-10 | 83 |
trunk blood vessel | 2.35e-08 | 7 |
cardiovascular system | 4.22e-08 | 109 |
circulatory system | 6.64e-08 | 112 |
epithelial tube | 1.34e-07 | 117 |
compound organ | 1.88e-07 | 68 |