FFCP PHASE1:Hg19::chr4:8202186..8202194,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:8202186..8202194,- | |||
|coexpression_cluster_id=C752 | |||
|description=CAGE_peak_at_chr4:8202186..8202194,- | |description=CAGE_peak_at_chr4:8202186..8202194,- | ||
|id=chr4:8202186..8202194,- | |id=chr4:8202186..8202194,- | ||
|ontology_enrichment_celltype=CL:0000624!2.07e-26!6;CL:0000738!3.46e-24!140;CL:0002031!2.35e-23!124;CL:0002087!2.94e-22!119;CL:0000838!1.29e-20!52;CL:0000542!3.58e-20!53;CL:0000051!3.58e-20!53;CL:0000037!9.13e-19!172;CL:0000566!9.13e-19!172;CL:0000988!1.85e-17!182;CL:0002393!1.90e-16!9;CL:0002397!1.90e-16!9;CL:0002032!2.19e-16!165;CL:0000837!2.19e-16!165;CL:0000791!2.38e-16!18;CL:0000789!2.38e-16!18;CL:0002420!2.38e-16!18;CL:0002419!2.38e-16!18;CL:0000790!2.38e-16!18;CL:0000084!8.55e-15!25;CL:0000827!8.55e-15!25;CL:0000840!1.68e-09!5;CL:0001029!1.68e-09!5;CL:0000623!2.43e-09!3;CL:0000825!2.43e-09!3;CL:0000898!3.11e-09!3;CL:0000784!3.98e-09!3;CL:0000451!6.13e-09!10;CL:0000875!9.28e-09!3;CL:0002396!9.28e-09!3;CL:0000810!1.33e-07!1;CL:0000895!1.33e-07!1;CL:0002436!1.33e-07!1;CL:0002427!1.33e-07!1;CL:0002428!1.33e-07!1;CL:0002429!1.33e-07!1;CL:0002433!1.33e-07!1;CL:0002431!1.33e-07!1;CL:0002432!1.33e-07!1;CL:0000134!4.08e-07!358;CL:0002320!7.07e-07!365 | |ontology_enrichment_celltype=CL:0000624!2.07e-26!6;CL:0000738!3.46e-24!140;CL:0002031!2.35e-23!124;CL:0002087!2.94e-22!119;CL:0000838!1.29e-20!52;CL:0000542!3.58e-20!53;CL:0000051!3.58e-20!53;CL:0000037!9.13e-19!172;CL:0000566!9.13e-19!172;CL:0000988!1.85e-17!182;CL:0002393!1.90e-16!9;CL:0002397!1.90e-16!9;CL:0002032!2.19e-16!165;CL:0000837!2.19e-16!165;CL:0000791!2.38e-16!18;CL:0000789!2.38e-16!18;CL:0002420!2.38e-16!18;CL:0002419!2.38e-16!18;CL:0000790!2.38e-16!18;CL:0000084!8.55e-15!25;CL:0000827!8.55e-15!25;CL:0000840!1.68e-09!5;CL:0001029!1.68e-09!5;CL:0000623!2.43e-09!3;CL:0000825!2.43e-09!3;CL:0000898!3.11e-09!3;CL:0000784!3.98e-09!3;CL:0000451!6.13e-09!10;CL:0000875!9.28e-09!3;CL:0002396!9.28e-09!3;CL:0000810!1.33e-07!1;CL:0000895!1.33e-07!1;CL:0002436!1.33e-07!1;CL:0002427!1.33e-07!1;CL:0002428!1.33e-07!1;CL:0002429!1.33e-07!1;CL:0002433!1.33e-07!1;CL:0002431!1.33e-07!1;CL:0002432!1.33e-07!1;CL:0000134!4.08e-07!358;CL:0002320!7.07e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.09e-44;6!CL:0000791;8.86e-34;18!CL:0000789;8.86e-34;18!CL:0002419;8.86e-34;18!CL:0000084;1.10e-24;25!CL:0000542;9.29e-08;53!CL:0000625;2.55e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,9.76e-45,6;CL:0000791,8.86e-34,18;CL:0000789,8.86e-34,18;CL:0002420,8.86e-34,18;CL:0002419,8.86e-34,18;CL:0000790,8.86e-34,18;CL:0000084,1.10e-24,25;CL:0000827,1.10e-24,25;CL:0000838,1.77e-12,52;CL:0000542,2.91e-12,53;CL:0000051,2.91e-12,53;CL:0000625,2.63e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;8.86e-34;18!CL:0000051;9.29e-08;53 | |||
|ontology_enrichment_disease=DOID:630!1.61e-07!1;DOID:0050177!1.61e-07!1;DOID:0050427!1.61e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.590129310341499,1.96505381374582,4.5232329779892,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.812411591295047,0,0,0,0,0,0,0.535081656179426,0,0,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,1.87208137048455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862510299438069,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.590129310341499,1.96505381374582,4.5232329779892,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.812411591295047,0,0,0,0,0,0,0.535081656179426,0,0,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,1.87208137048455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862510299438069,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p@chr4:8202186..8202194,- | |short_description=p@chr4:8202186..8202194,- | ||
}} | }} |
Latest revision as of 07:19, 30 July 2015
Short description: | p@chr4:8202186..8202194, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:8202186..8202194, - |
Coexpression cluster: | C752_CD4_acute_NK_chronic_CD14_Neutrophils_lymphoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 9.76e-45 | 6 |
mature alpha-beta T cell | 8.86e-34 | 18 |
alpha-beta T cell | 8.86e-34 | 18 |
immature T cell | 8.86e-34 | 18 |
mature T cell | 8.86e-34 | 18 |
immature alpha-beta T cell | 8.86e-34 | 18 |
T cell | 1.10e-24 | 25 |
pro-T cell | 1.10e-24 | 25 |
lymphoid lineage restricted progenitor cell | 1.77e-12 | 52 |
lymphocyte | 2.91e-12 | 53 |
common lymphoid progenitor | 2.91e-12 | 53 |
CD8-positive, alpha-beta T cell | 2.63e-07 | 11 |