FFCP PHASE1:Hg19::chr1:226411361..226411366,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83881 | |EntrezGene=83881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13363 | |HGNC=13363 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2W2 | |UniProt=Q9H2W2 | ||
|association_with_transcript=-16bp_to_ENST00000366810,NM_031944,uc010pvm.1_5end | |association_with_transcript=-16bp_to_ENST00000366810,NM_031944,uc010pvm.1_5end | ||
|cluster_id=chr1:226411361..226411366,+ | |||
|coexpression_cluster_id=C425 | |||
|description=CAGE_peak_1_at_MIXL1_5end | |description=CAGE_peak_1_at_MIXL1_5end | ||
|id=chr1:226411361..226411366,+ | |id=chr1:226411361..226411366,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.85e-22!5;CL:0000039!7.48e-15!7;CL:0000586!7.48e-15!7;CL:0000540!2.87e-07!6;CL:0000031!2.87e-07!6;CL:0000404!2.87e-07!6 | |ontology_enrichment_celltype=CL:0002322!1.85e-22!5;CL:0000039!7.48e-15!7;CL:0000586!7.48e-15!7;CL:0000540!2.87e-07!6;CL:0000031!2.87e-07!6;CL:0000404!2.87e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.12e-42;5!CL:0000182;3.99e-18;12!CL:0002321;2.40e-14;15!CL:0000148;1.82e-12;10!CL:0000540;7.76e-10;6!CL:0000404;7.76e-10;6!CL:0000147;4.55e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.80e-42,5;CL:0000182,4.26e-18,12;CL:0000148,1.75e-12,10;CL:0000541,1.75e-12,10;CL:0000540,7.76e-10,6;CL:0000031,7.76e-10,6;CL:0000404,7.76e-10,6;CL:0000147,4.43e-09,14;CL:0000047,1.35e-07,8;CL:0000133,1.70e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.67e-20;11!UBERON:0009497;9.31e-17;13!CL:0000031;7.76e-10;6!UBERON:0001041;2.12e-07;30!UBERON:0003104;4.11e-07;31 | |||
|ontology_enrichment_disease=DOID:5409!1.96e-09!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!3.83e-13!8;UBERON:0003135!1.76e-09!11 | |ontology_enrichment_uberon=UBERON:0000473!3.83e-13!8;UBERON:0003135!1.76e-09!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.47e-11;19!UBERON:0006925;1.47e-11;19!UBERON:0002423;7.68e-09;25!UBERON:0002365;7.92e-07;31!UBERON:0002330;7.92e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.53e-11,19;UBERON:0006925,1.53e-11,19;UBERON:0008836,1.53e-11,19;UBERON:0008835,5.31e-10,22;UBERON:0003894,5.31e-10,22;UBERON:0009854,1.41e-09,23;UBERON:0007499,7.92e-09,25;UBERON:0009497,7.92e-09,25;UBERON:0000015,7.92e-09,25;UBERON:0002423,7.92e-09,25;UBERON:0006235,7.92e-09,25;UBERON:0004161,7.92e-09,25;UBERON:0009856,1.70e-08,26;UBERON:0002365,3.71e-07,31;UBERON:0002330,3.71e-07,31 | |||
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| ||
|short_description=p1@MIXL1 | |short_description=p1@MIXL1 | ||
}} | }} |
Latest revision as of 01:26, 16 September 2015
Short description: | p1@MIXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIXL1_5end |
Coexpression cluster: | C425_iPS_HES3GFP_H9_teratocarcinoma_testicular_hepatocellular_Wilms |
Association with transcript: | -16bp_to_ENST00000366810, NM_031944, uc010pvm.1_5end |
EntrezGene: | MIXL1 |
HGNC: | 13363 |
UniProt: | Q9H2W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.80e-42 | 5 |
hepatocyte | 4.26e-18 | 12 |
melanocyte | 1.75e-12 | 10 |
melanoblast | 1.75e-12 | 10 |
neuron | 7.76e-10 | 6 |
neuroblast | 7.76e-10 | 6 |
electrically signaling cell | 7.76e-10 | 6 |
pigment cell | 4.43e-09 | 14 |
neuronal stem cell | 1.35e-07 | 8 |
neurectodermal cell | 1.70e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
liver | 1.53e-11 | 19 |
digestive gland | 1.53e-11 | 19 |
liver bud | 1.53e-11 | 19 |
hepatic diverticulum | 5.31e-10 | 22 |
liver primordium | 5.31e-10 | 22 |
digestive tract diverticulum | 1.41e-09 | 23 |
epithelial sac | 7.92e-09 | 25 |
epithelium of foregut-midgut junction | 7.92e-09 | 25 |
anatomical boundary | 7.92e-09 | 25 |
hepatobiliary system | 7.92e-09 | 25 |
foregut-midgut junction | 7.92e-09 | 25 |
septum transversum | 7.92e-09 | 25 |
sac | 1.70e-08 | 26 |
exocrine gland | 3.71e-07 | 31 |
exocrine system | 3.71e-07 | 31 |