FFCP PHASE1:Hg19::chr1:42630408..42630425,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2980 | |EntrezGene=2980 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4682 | |HGNC=4682 | ||
|TSSclassifier=strong | |||
|UniProt=Q02747 | |UniProt=Q02747 | ||
|association_with_transcript=-13bp_to_NM_033553,uc001chd.1_5end | |association_with_transcript=-13bp_to_NM_033553,uc001chd.1_5end | ||
|cluster_id=chr1:42630408..42630425,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_GUCA2A_5end | |description=CAGE_peak_1_at_GUCA2A_5end | ||
|id=chr1:42630408..42630425,- | |id=chr1:42630408..42630425,- | ||
|ontology_enrichment_celltype=CL:0002541!6.79e-13!3;CL:0000039!1.05e-08!7;CL:0000586!1.05e-08!7 | |ontology_enrichment_celltype=CL:0002541!6.79e-13!3;CL:0000039!1.05e-08!7;CL:0000586!1.05e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.04e-23;3!CL:0002563;7.88e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.08e-23,3;CL:0002563,7.88e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.05e-09;1!UBERON:0003124;4.72e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.69e-31!35;UBERON:0000160!2.09e-25!27;UBERON:0004921!4.85e-18!129;UBERON:0004185!4.85e-18!129;UBERON:0000059!1.04e-17!11;UBERON:0001007!2.02e-16!155;UBERON:0001555!2.02e-16!155;UBERON:0007026!2.02e-16!155;UBERON:0004119!1.00e-15!169;UBERON:0000925!1.00e-15!169;UBERON:0006595!1.00e-15!169;UBERON:0004907!2.18e-13!5;UBERON:0000476!6.79e-13!3;UBERON:0000920!6.79e-13!3;UBERON:0000077!3.70e-12!130;UBERON:0001155!1.60e-11!9;UBERON:0001052!8.68e-10!4;UBERON:0005631!1.13e-09!14;UBERON:0000158!1.13e-09!14;UBERON:0003124!1.64e-09!7;UBERON:0002108!5.14e-09!14;UBERON:0004177!1.32e-08!7;UBERON:0003127!3.91e-08!2;UBERON:0000945!1.66e-07!8;UBERON:0010039!1.66e-07!8;UBERON:0001041!5.30e-07!98;UBERON:0002075!6.66e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.09e-51;17!UBERON:0005409;4.99e-47;22!UBERON:0000059;2.80e-34;11!UBERON:0004921;1.73e-28;33!UBERON:0004907;5.22e-25;5!UBERON:0003124;1.04e-23;3!UBERON:0000920;1.04e-23;3!UBERON:0001155;5.21e-22;9!UBERON:0001052;6.07e-18;4!UBERON:0002108;6.00e-15;4!UBERON:0005631;1.74e-12;10!UBERON:0000158;1.74e-12;10!UBERON:0001555;9.51e-11;54!UBERON:0001007;2.65e-09;81!UBERON:0001154;3.05e-09;1!UBERON:0001153;3.05e-09;1!UBERON:0009854;3.05e-09;1!UBERON:0001242;7.88e-09;4!UBERON:0001262;7.88e-09;4!UBERON:0004786;7.88e-09;4!UBERON:0004808;7.88e-09;4!UBERON:0001277;7.88e-09;4!UBERON:0000478;7.66e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.99e-51,17;UBERON:0005409,2.12e-41,25;UBERON:0000059,2.73e-34,11;UBERON:0004907,5.06e-25,5;UBERON:0000920,1.08e-23,3;UBERON:0001155,5.21e-22,9;UBERON:0001052,5.89e-18,4;UBERON:0003124,7.75e-18,7;UBERON:0002108,6.00e-15,4;UBERON:0005631,1.50e-13,14;UBERON:0000158,1.50e-13,14;UBERON:0004921,5.67e-12,118;UBERON:0004119,8.15e-11,160;UBERON:0000925,8.15e-11,160;UBERON:0006595,8.15e-11,160;UBERON:0001007,1.12e-10,145;UBERON:0001555,1.12e-10,145;UBERON:0007026,1.12e-10,145;UBERON:0001046,4.04e-10,19;UBERON:0001154,3.05e-09,1;UBERON:0001153,3.05e-09,1;UBERON:0001045,3.05e-09,1;UBERON:0001242,7.88e-09,4;UBERON:0001262,7.88e-09,4;UBERON:0004786,7.88e-09,4;UBERON:0004808,7.88e-09,4;UBERON:0001277,7.88e-09,4;UBERON:0000478,7.83e-08,24 | |||
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| ||
|short_description=p1@GUCA2A | |short_description=p1@GUCA2A | ||
}} | }} |
Latest revision as of 02:58, 18 September 2015
Short description: | p1@GUCA2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GUCA2A_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -13bp_to_NM_033553, uc001chd.1_5end |
EntrezGene: | GUCA2A |
HGNC: | 4682 |
UniProt: | Q02747 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.08e-23 | 3 |
intestinal epithelial cell | 7.88e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.99e-51 | 17 |
gastrointestinal system | 2.12e-41 | 25 |
large intestine | 2.73e-34 | 11 |
lower digestive tract | 5.06e-25 | 5 |
egg chorion | 1.08e-23 | 3 |
colon | 5.21e-22 | 9 |
rectum | 5.89e-18 | 4 |
chorion | 7.75e-18 | 7 |
small intestine | 6.00e-15 | 4 |
extraembryonic membrane | 1.50e-13 | 14 |
membranous layer | 1.50e-13 | 14 |
subdivision of digestive tract | 5.67e-12 | 118 |
endoderm-derived structure | 8.15e-11 | 160 |
endoderm | 8.15e-11 | 160 |
presumptive endoderm | 8.15e-11 | 160 |
digestive system | 1.12e-10 | 145 |
digestive tract | 1.12e-10 | 145 |
primitive gut | 1.12e-10 | 145 |
hindgut | 4.04e-10 | 19 |
vermiform appendix | 3.05e-09 | 1 |
caecum | 3.05e-09 | 1 |
midgut | 3.05e-09 | 1 |
intestinal mucosa | 7.88e-09 | 4 |
wall of intestine | 7.88e-09 | 4 |
gastrointestinal system mucosa | 7.88e-09 | 4 |
gastrointestinal system epithelium | 7.88e-09 | 4 |
intestinal epithelium | 7.88e-09 | 4 |
extraembryonic structure | 7.83e-08 | 24 |