FFCP PHASE1:Hg19::chr12:94232015..94232018,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:94232015..94232018,+
|short_description=p@chr12:94232015..94232018,+
|description=CAGE_peak_at_chr12:94232015..94232018,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:94232015..94232018,+ | |||
|description=CAGE_peak_at_chr12:94232015..94232018,+ | |||
|id=chr12:94232015..94232018,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.31e-09!42;CL:0000860!4.58e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.87e-16;33!CL:0002057;8.87e-16;33!CL:0000473;2.46e-11;39!CL:0000234;2.46e-11;39!CL:0000576;7.34e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.24e-13,42;CL:0002057,7.24e-13,42;CL:0000473,7.65e-11,48;CL:0000234,7.65e-11,48;CL:0002194,2.85e-09,59;CL:0000576,2.85e-09,59;CL:0000040,2.85e-09,59;CL:0000559,2.85e-09,59;CL:0002009,7.32e-09,61;CL:0000839,6.02e-08,66;CL:0000557,8.82e-08,67;CL:0000766,5.07e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-09;42!UBERON:0005062;1.04e-07;4!UBERON:0007284;1.04e-07;4!UBERON:0007297;1.11e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.61e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.83e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-18!115;UBERON:0001017!5.27e-09!82;UBERON:0001049!1.25e-08!57;UBERON:0005068!1.25e-08!57;UBERON:0006241!1.25e-08!57;UBERON:0007135!1.25e-08!57;UBERON:0005743!1.97e-08!86;UBERON:0002390!3.64e-08!102;UBERON:0003061!3.64e-08!102;UBERON:0000073!4.83e-08!94;UBERON:0001016!4.83e-08!94;UBERON:0002780!2.00e-07!41;UBERON:0001890!2.00e-07!41;UBERON:0006240!2.00e-07!41;UBERON:0003080!5.30e-07!42;UBERON:0002193!6.78e-07!112;UBERON:0000955!7.52e-07!69;UBERON:0006238!7.52e-07!69;UBERON:0002616!7.76e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.01e-11;3!UBERON:0004054;7.01e-11;3!UBERON:0003978;3.87e-10;3!UBERON:0000946;3.87e-10;3!UBERON:0005904;2.94e-08;4!UBERON:0002784;4.53e-08;4!UBERON:0001894;6.73e-08;7!UBERON:0001897;8.33e-08;2!UBERON:0010225;8.33e-08;2!UBERON:0000178;1.72e-07;15!UBERON:0000179;1.72e-07;15!UBERON:0000463;1.72e-07;15!UBERON:0001875;2.61e-07;2!UBERON:0002133;2.61e-07;2!UBERON:0006514;2.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.52e-11,98;UBERON:0003061,4.52e-11,98;UBERON:0006947,8.37e-11,3;UBERON:0004054,8.37e-11,3;UBERON:0007023,1.77e-10,114;UBERON:0003978,2.82e-10,3;UBERON:0009751,2.82e-10,3;UBERON:0000946,2.82e-10,3;UBERON:0002523,2.82e-10,3;UBERON:0005983,2.82e-10,3;UBERON:0002165,2.82e-10,3;UBERON:0002062,2.82e-10,3;UBERON:0007280,2.82e-10,3;UBERON:0002193,1.45e-09,108;UBERON:0005904,3.35e-08,4;UBERON:0002784,5.47e-08,4;UBERON:0001894,8.51e-08,7;UBERON:0006222,8.51e-08,7;UBERON:0001897,1.08e-07,2;UBERON:0010225,1.08e-07,2;UBERON:0000178,1.32e-07,15;UBERON:0000179,1.32e-07,15;UBERON:0000463,1.32e-07,15;UBERON:0001875,1.46e-07,2;UBERON:0006514,1.46e-07,2;UBERON:0002371,1.53e-07,76;UBERON:0002133,3.30e-07,2;UBERON:0001474,9.64e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0.125542639594803,0.152826811495903,0.246301768349837,0,0,0.383829398097213,0.154816123316076,0,0,0,0.387336002901508,0,0,0,0,0,0,0.32389366601898,0,0.290796477559129,0.377875943688809,0.970336244751265,2.55671940596253,0.822335776043652,2.47765096716083,2.8769239232215,0.256160706529101,0.236482229888585,3.7922024881028,2.5819387343353,0,1.31769637679823,0.272906150057846,1.12361742222542,5.81559395504715,0.962787081228281,3.19668562899521,0,0.398927315243264,0,0.290209238628584,1.70215567407342,2.4912889959823,5.27622197039161,5.21482918420201,0.868755378820466,1.21079900526674,0.736555271975129,0.949387162322653,0.211255286311942,0,0.209658645508376,0.22465726229299,0,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.822405995998037,0.334372990781356,0.32592226663359,1.4203434172042,0,0,0.294605907474837,0.443067789167242,0,0.128091319725675,0.910415432919148,0.493313713811028,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0.339928028092699,0,0.68725489096526,0.253019692019503,0,0,0.950452044448374,0.150575119077773,0,1.24930726552346,0,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0.311211035399766,0,0.326923806226917,0,0,0,0,0,0,0,0.161872944368132,0.421352420106746,0.204154171254893,0.491337269247072,0,0,0,0,0,0,0.625592599359821,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0.504867548488229,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0.571652865261156,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0.560425719967636,0.394061520403854,0.431255149719035,0.256686072559497,0.254094624222463,1.30139853857622,1.54657762555539,0,1.27587750330633,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0,0.260650843404249,0,0,0.413536052245775,1.2942852049117,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.120859449591622,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.515205058238611,0.0915694648183434,0.082509499920588,0,0,0,0,0.616194468458578,0.767518373630648,1.37836572484531,0.537101224341368,0.870100163485371,0.426133137080504,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.539617372749944,0,0.235624804691373,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,0,0.185803175125719,0.432807638929335,0.426851060090485,0.159426272728822,0,0,0,0.649243880549111,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0.561421621224659,0.439524537815682,0.121360521749513,0,0.284136146806413,0,0.296964680832639,0,0,0.422008249231538,0.333926115068718,0.16480387422676,9.07839254950372,0,0.552567831062295,0.755798243562828,0.20453736500431,0.246169610922139,0,0,0.179021174675609,0,0.493217028184668,2.3948309234694,2.22273980289274,1.93866549219044,0,0,0,0,0,0.341380344856499,0,0,0.689486746482929,0.583209226766509,0.347249989866585,0.885741385813839,0.120596438625408,0,0.774054819518572,0,0.219385397153973,0.10893846351899,0.278847488557207,0.615602068030377,0,0.69169171316418,0,0.434589487688032,0,0.183195186803725,0,0,0.470940769185074,0.831058409500782,0.451191321234361,0.392125068635479,0.503464760927528,0,1.11255605286265,0,0,0.282706142867882,0,0,0.707660516026713,0.611030144933625,3.26173241548684,2.22415090103705,1.8795950910982,0.471807930864739,0,0,0.182454789215666,0.19566461893209,0,2.36750641709634,0,0.30607276163049,0.568679216656392,0.150323419414493,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0.174118413160805,1.22308667769421,0,0.0967563312890851,0,0.164230914106418,0,0.0882561266915003,0.677942222341597,0.274083849293502,1.19228767021794,0.126621591911757,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0.114536596165916,1.37275998289572,0.288109595976299,0.124252535565433,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| ||
|short_description=p@chr12:94232015..94232018,+ | |||
}} | }} |
Latest revision as of 13:42, 24 July 2015
Short description: | p@chr12:94232015..94232018, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:94232015..94232018, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.24e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.24e-13 | 42 |
defensive cell | 7.65e-11 | 48 |
phagocyte | 7.65e-11 | 48 |
monopoietic cell | 2.85e-09 | 59 |
monocyte | 2.85e-09 | 59 |
monoblast | 2.85e-09 | 59 |
promonocyte | 2.85e-09 | 59 |
macrophage dendritic cell progenitor | 7.32e-09 | 61 |
myeloid lineage restricted progenitor cell | 6.02e-08 | 66 |
granulocyte monocyte progenitor cell | 8.82e-08 | 67 |
myeloid leukocyte | 5.07e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.52e-11 | 98 |
blood island | 4.52e-11 | 98 |
male genital duct | 8.37e-11 | 3 |
internal male genitalia | 8.37e-11 | 3 |
adult organism | 1.77e-10 | 114 |
valve | 2.82e-10 | 3 |
cardiac mesenchyme | 2.82e-10 | 3 |
cardial valve | 2.82e-10 | 3 |
tunica intima | 2.82e-10 | 3 |
heart layer | 2.82e-10 | 3 |
endocardium | 2.82e-10 | 3 |
endocardial cushion | 2.82e-10 | 3 |
presumptive endocardium | 2.82e-10 | 3 |
hemolymphoid system | 1.45e-09 | 108 |
duct of male reproductive system | 3.35e-08 | 4 |
regional part of diencephalon | 5.47e-08 | 4 |
diencephalon | 8.51e-08 | 7 |
future diencephalon | 8.51e-08 | 7 |
dorsal plus ventral thalamus | 1.08e-07 | 2 |
thalamic complex | 1.08e-07 | 2 |
blood | 1.32e-07 | 15 |
haemolymphatic fluid | 1.32e-07 | 15 |
organism substance | 1.32e-07 | 15 |
globus pallidus | 1.46e-07 | 2 |
pallidum | 1.46e-07 | 2 |
bone marrow | 1.53e-07 | 76 |
atrioventricular valve | 3.30e-07 | 2 |
bone element | 9.64e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.83e-07 | 2 |