FFCP PHASE1:Hg19::chr13:100634809..100634826,+: Difference between revisions
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|id=chr13:100634809..100634826,+
|short_description=p11@ZIC2
|description=CAGE_peak_11_at_ZIC2_5end
|association_with_transcript=490bp_to_AF104902,AF193855_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7546 | |EntrezGene=7546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12873 | |HGNC=12873 | ||
|TSSclassifier=strong | |||
|UniProt=O95409 | |UniProt=O95409 | ||
|association_with_transcript=490bp_to_AF104902,AF193855_5end | |||
|cluster_id=chr13:100634809..100634826,+ | |||
|coexpression_cluster_id=C1024 | |||
|description=CAGE_peak_11_at_ZIC2_5end | |||
|id=chr13:100634809..100634826,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.45e-11!5;CL:0002319!1.27e-09!25;CL:0000133!4.62e-08!59;CL:0000708!3.25e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002575;9.86e-18;2!CL:0002321;7.92e-10;15!CL:0000669;1.50e-09;4!CL:0002322;5.73e-08;5!CL:0000333;6.78e-08;5!CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,9.07e-18,2;CL:0000669,1.44e-09,4;CL:0002322,5.73e-08,5;CL:0000540,8.97e-07,6;CL:0000031,8.97e-07,6;CL:0000404,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.73e-45;3!CL:0000031;8.72e-07;6 | |||
|ontology_enrichment_disease=DOID:171!3.76e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.79e-28!82;UBERON:0005743!2.15e-27!86;UBERON:0000073!5.50e-27!94;UBERON:0001016!5.50e-27!94;UBERON:0002346!1.44e-24!90;UBERON:0000955!7.77e-22!69;UBERON:0006238!7.77e-22!69;UBERON:0003075!3.67e-20!86;UBERON:0007284!3.67e-20!86;UBERON:0001049!3.71e-20!57;UBERON:0005068!3.71e-20!57;UBERON:0006241!3.71e-20!57;UBERON:0007135!3.71e-20!57;UBERON:0002616!2.92e-19!59;UBERON:0000924!1.01e-18!173;UBERON:0006601!1.01e-18!173;UBERON:0004121!1.45e-15!169;UBERON:0000033!2.49e-14!123;UBERON:0000153!3.55e-13!129;UBERON:0007811!3.55e-13!129;UBERON:0002619!5.72e-13!22;UBERON:0000956!6.89e-13!25;UBERON:0000203!6.89e-13!25;UBERON:0002020!7.87e-13!34;UBERON:0003528!7.87e-13!34;UBERON:0004733!8.19e-13!12;UBERON:0002028!8.19e-13!12;UBERON:0007277!8.19e-13!12;UBERON:0001893!1.54e-12!34;UBERON:0001950!2.37e-12!20;UBERON:0003056!3.42e-12!61;UBERON:0003076!3.70e-12!15;UBERON:0003057!3.70e-12!15;UBERON:0001869!4.48e-12!32;UBERON:0004732!1.15e-11!13;UBERON:0002791!1.37e-11!33;UBERON:0002780!3.59e-11!41;UBERON:0001890!3.59e-11!41;UBERON:0006240!3.59e-11!41;UBERON:0002680!4.81e-11!9;UBERON:0001895!4.81e-11!9;UBERON:0010092!4.81e-11!9;UBERON:0003080!8.47e-11!42;UBERON:0003210!3.25e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.13e-23;6!UBERON:0002680;1.01e-15;9!UBERON:0001895;1.01e-15;9!UBERON:0004733;4.67e-12;12!UBERON:0002028;4.67e-12;12!UBERON:0004732;3.30e-11;13!UBERON:0000013;6.78e-08;5!UBERON:0002410;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.34e-23,6;UBERON:0006215,4.34e-23,6;UBERON:0002680,9.04e-16,9;UBERON:0001895,9.04e-16,9;UBERON:0010092,9.04e-16,9;UBERON:0004733,4.30e-12,12;UBERON:0002028,4.30e-12,12;UBERON:0007277,4.30e-12,12;UBERON:0004732,3.05e-11,13;UBERON:0003076,7.09e-10,15;UBERON:0003057,7.09e-10,15;UBERON:0000013,7.49e-08,5;UBERON:0002410,7.49e-08,5 | |||
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| ||
|short_description=p11@ZIC2 | |||
}} | }} |
Latest revision as of 08:00, 16 September 2015
Short description: | p11@ZIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ZIC2_5end |
Coexpression cluster: | C1024_Pericytes_cerebellum_neuroblastoma_HES3GFP_iPS_extraskeletal_teratocarcinoma |
Association with transcript: | 490bp_to_AF104902, AF193855_5end |
EntrezGene: | ZIC2 |
HGNC: | 12873 |
UniProt: | O95409 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 9.07e-18 | 2 |
pericyte cell | 1.44e-09 | 4 |
embryonic stem cell | 5.73e-08 | 5 |
neuron | 8.97e-07 | 6 |
neuroblast | 8.97e-07 | 6 |
electrically signaling cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.34e-23 | 6 |
rhombic lip | 4.34e-23 | 6 |
regional part of metencephalon | 9.04e-16 | 9 |
metencephalon | 9.04e-16 | 9 |
future metencephalon | 9.04e-16 | 9 |
segmental subdivision of hindbrain | 4.30e-12 | 12 |
hindbrain | 4.30e-12 | 12 |
presumptive hindbrain | 4.30e-12 | 12 |
segmental subdivision of nervous system | 3.05e-11 | 13 |
posterior neural tube | 7.09e-10 | 15 |
chordal neural plate | 7.09e-10 | 15 |
sympathetic nervous system | 7.49e-08 | 5 |
autonomic nervous system | 7.49e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.49e-07 | 6 |