FFCP PHASE1:Hg19::chr6:30851167..30851195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=780 | |EntrezGene=780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2730 | |HGNC=2730 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000506573_5end | |association_with_transcript=0bp_to_ENST00000506573_5end | ||
|cluster_id=chr6:30851167..30851195,+ | |||
|description=CAGE_peak_10_at_DDR1_5end | |description=CAGE_peak_10_at_DDR1_5end | ||
|id=chr6:30851167..30851195,+ | |id=chr6:30851167..30851195,+ | ||
|ontology_enrichment_celltype=CL:0002076!5.93e-22!43;CL:0000066!1.45e-20!254;CL:0000223!1.08e-15!59;CL:0002368!1.80e-13!13;CL:1000507!1.67e-11!12;CL:1000494!1.67e-11!12;CL:0002159!5.05e-11!13;CL:1000497!1.11e-10!18;CL:0002518!1.11e-10!18;CL:1000449!2.31e-09!16;CL:0002202!5.41e-09!9;CL:0002632!5.41e-09!9;CL:0002251!5.40e-08!21;CL:0000240!1.53e-07!6;CL:0000311!1.53e-07!6;CL:0000079!1.53e-07!6;CL:0000237!1.53e-07!6;CL:0000036!1.53e-07!6;CL:0000357!1.53e-07!6;CL:0000114!1.53e-07!6 | |ontology_enrichment_celltype=CL:0002076!5.93e-22!43;CL:0000066!1.45e-20!254;CL:0000223!1.08e-15!59;CL:0002368!1.80e-13!13;CL:1000507!1.67e-11!12;CL:1000494!1.67e-11!12;CL:0002159!5.05e-11!13;CL:1000497!1.11e-10!18;CL:0002518!1.11e-10!18;CL:1000449!2.31e-09!16;CL:0002202!5.41e-09!9;CL:0002632!5.41e-09!9;CL:0002251!5.40e-08!21;CL:0000240!1.53e-07!6;CL:0000311!1.53e-07!6;CL:0000079!1.53e-07!6;CL:0000237!1.53e-07!6;CL:0000036!1.53e-07!6;CL:0000357!1.53e-07!6;CL:0000114!1.53e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.19e-23;13!CL:1000507;9.21e-21;10!CL:1000494;9.21e-21;10!CL:0002076;5.66e-20;42!CL:0002159;5.97e-18;14!CL:0002202;5.14e-14;9!CL:0002632;5.14e-14;9!CL:1000449;3.21e-13;15!CL:0000244;2.14e-12;4!CL:0000731;2.14e-12;4!CL:1000497;1.89e-11;17!CL:0002518;1.89e-11;17!CL:0002166;9.86e-10;3!CL:0002621;1.35e-09;3!CL:0000239;4.26e-09;3!CL:1000615;4.26e-09;3!CL:0002306;4.26e-09;3!CL:0000307;4.69e-09;3!CL:0000312;5.50e-09;5!CL:0002328;1.14e-08;3!CL:0002681;9.90e-08;12!CL:0002584;9.90e-08;12!CL:0000240;1.76e-07;6!CL:0000311;1.76e-07;6!CL:0000079;1.76e-07;6!CL:0000237;1.76e-07;6!CL:0000362;2.10e-07;9!CL:0002077;9.61e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.97e-26,42;CL:0002368,3.32e-23,13;CL:0000066,1.50e-21,253;CL:1000507,9.39e-21,10;CL:1000494,9.39e-21,10;CL:0002159,5.52e-18,14;CL:0000223,3.15e-17,58;CL:0002202,5.27e-14,9;CL:0002632,5.27e-14,9;CL:1000449,3.25e-13,15;CL:0000244,2.09e-12,4;CL:0000731,2.09e-12,4;CL:1000497,1.91e-11,17;CL:0002518,1.91e-11,17;CL:0002166,1.02e-09,3;CL:0002621,1.28e-09,3;CL:0000239,3.68e-09,3;CL:1000615,3.68e-09,3;CL:0002306,3.68e-09,3;CL:0000068,4.34e-09,3;CL:0000069,4.34e-09,3;CL:0000307,4.34e-09,3;CL:0000377,4.34e-09,3;CL:0000312,4.56e-09,5;CL:0002328,1.38e-08,3;CL:0002681,1.10e-07,12;CL:0002584,1.10e-07,12;CL:0000240,1.51e-07,6;CL:0000311,1.51e-07,6;CL:0000079,1.51e-07,6;CL:0000237,1.51e-07,6;CL:0000036,1.51e-07,6;CL:0000357,1.51e-07,6;CL:0000114,1.51e-07,6;CL:0000362,1.86e-07,9;CL:0002077,1.98e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;3.33e-09;58!CL:0000377;4.69e-09;3!CL:0000357;1.76e-07;6!CL:0000114;1.76e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!4.44e-12!14;DOID:305!1.13e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.61e-08;14!DOID:4468;6.02e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.49e-08,14;DOID:4468,6.67e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0006554!2.44e-17!44;UBERON:0001008!9.98e-17!45;UBERON:0003887!7.24e-13!21;UBERON:0004119!8.36e-13!169;UBERON:0000925!8.36e-13!169;UBERON:0006595!8.36e-13!169;UBERON:0002113!2.44e-12!27;UBERON:0003918!2.44e-12!27;UBERON:0005095!2.44e-12!27;UBERON:0007687!2.44e-12!27;UBERON:0000464!3.68e-12!104;UBERON:0000489!7.48e-12!32;UBERON:0009773!1.67e-11!12;UBERON:0001231!1.67e-11!12;UBERON:0004810!1.67e-11!12;UBERON:0000058!1.88e-11!26;UBERON:0000080!2.61e-11!18;UBERON:0002120!2.61e-11!18;UBERON:0004875!2.61e-11!18;UBERON:0005721!2.61e-11!18;UBERON:0005754!2.61e-11!18;UBERON:0007297!2.61e-11!18;UBERON:0005177!1.98e-10!107;UBERON:0006555!2.53e-10!17;UBERON:0005103!2.53e-10!17;UBERON:0000083!2.53e-10!17;UBERON:0009201!2.53e-10!17;UBERON:0004819!2.53e-10!17;UBERON:0006553!2.53e-10!17;UBERON:0003074!2.53e-10!17;UBERON:0003060!2.53e-10!17;UBERON:0000466!7.36e-10!126;UBERON:0004876!9.64e-10!20;UBERON:0004211!2.31e-09!16;UBERON:0001285!2.31e-09!16;UBERON:0007684!2.31e-09!16;UBERON:0003220!2.31e-09!16;UBERON:0004208!2.31e-09!16;UBERON:0001007!4.07e-09!155;UBERON:0001555!4.07e-09!155;UBERON:0007026!4.07e-09!155;UBERON:0003064!6.06e-09!37;UBERON:0001004!7.69e-09!72;UBERON:0009569!1.12e-08!113;UBERON:0007196!9.05e-08!14;UBERON:0001558!9.05e-08!14;UBERON:0000365!9.93e-08!5;UBERON:0005911!1.66e-07!82;UBERON:0005172!3.27e-07!55;UBERON:0005173!3.27e-07!55;UBERON:0005178!8.09e-07!34;UBERON:0002224!8.09e-07!34;UBERON:0004921!9.53e-07!129;UBERON:0004185!9.53e-07!129;UBERON:0002553!9.72e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.11e-22;30!UBERON:0001008;4.11e-22;30!UBERON:0004211;9.21e-21;10!UBERON:0009773;9.21e-21;10!UBERON:0001231;9.21e-21;10!UBERON:0004810;9.21e-21;10!UBERON:0000365;1.88e-14;5!UBERON:0000486;2.37e-14;12!UBERON:0002113;1.90e-13;24!UBERON:0011143;1.90e-13;24!UBERON:0006555;3.21e-13;15!UBERON:0004819;3.21e-13;15!UBERON:0001285;3.21e-13;15!UBERON:0007684;3.21e-13;15!UBERON:0000489;1.58e-12;29!UBERON:0005910;5.70e-12;6!UBERON:0007196;3.29e-10;15!UBERON:0001558;3.29e-10;15!UBERON:0001949;1.35e-09;3!UBERON:0006853;4.26e-09;3!UBERON:0007685;4.26e-09;3!UBERON:0004134;4.26e-09;3!UBERON:0004815;1.14e-08;3!UBERON:0002031;1.14e-08;3!UBERON:0004175;1.38e-08;21!UBERON:0006947;3.51e-08;3!UBERON:0004054;3.51e-08;3!UBERON:0001225;9.90e-08;12!UBERON:0008987;9.90e-08;12!UBERON:0001708;2.27e-07;4!UBERON:0008895;2.27e-07;4!UBERON:0005911;7.09e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,9.39e-21,10;UBERON:0006554,4.23e-18,47;UBERON:0001008,1.31e-17,48;UBERON:0002113,7.65e-17,26;UBERON:0003918,7.65e-17,26;UBERON:0011143,7.65e-17,26;UBERON:0005095,7.65e-17,26;UBERON:0007687,7.65e-17,26;UBERON:0000489,1.15e-15,31;UBERON:0006555,4.22e-15,16;UBERON:0004819,4.22e-15,16;UBERON:0000365,1.53e-14,5;UBERON:0004211,3.25e-13,15;UBERON:0009773,3.25e-13,15;UBERON:0001231,3.25e-13,15;UBERON:0001285,3.25e-13,15;UBERON:0007684,3.25e-13,15;UBERON:0004208,3.25e-13,15;UBERON:0005910,4.82e-12,6;UBERON:0007196,3.03e-10,15;UBERON:0001558,3.03e-10,15;UBERON:0005177,6.42e-10,101;UBERON:0001949,1.28e-09,3;UBERON:0003103,2.63e-09,68;UBERON:0006853,3.68e-09,3;UBERON:0007685,3.68e-09,3;UBERON:0004134,3.68e-09,3;UBERON:0004815,1.38e-08,3;UBERON:0002031,1.38e-08,3;UBERON:0006947,2.27e-08,3;UBERON:0004054,2.27e-08,3;UBERON:0001225,1.10e-07,12;UBERON:0008987,1.10e-07,12;UBERON:0009569,1.55e-07,112;UBERON:0005172,1.60e-07,54;UBERON:0005173,1.60e-07,54;UBERON:0001708,2.32e-07,4;UBERON:0008895,2.32e-07,4;UBERON:0004175,6.60e-07,25 | |||
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|short_description=p10@DDR1 | |short_description=p10@DDR1 | ||
}} | }} |
Latest revision as of 19:07, 17 September 2015
Short description: | p10@DDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_DDR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000506573_5end |
EntrezGene: | DDR1 |
HGNC: | 2730 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.49e-08 | 14 |
clear cell adenocarcinoma | 6.67e-07 | 2 |