FFCP PHASE1:Hg19::chr20:50179584..50179611,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4773 | |EntrezGene=4773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7776 | |HGNC=7776 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8G4 | |UniProt=F8W8G4 | ||
|association_with_transcript=-245bp_to_ENST00000371567_5end | |association_with_transcript=-245bp_to_ENST00000371567_5end | ||
|cluster_id=chr20:50179584..50179611,- | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_6_at_NFATC2_5end | |description=CAGE_peak_6_at_NFATC2_5end | ||
|id=chr20:50179584..50179611,- | |id=chr20:50179584..50179611,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;5.46e-60;3!CL:0000148;3.13e-32;10!CL:0000710;6.00e-25;20!CL:0000147;3.53e-23;14!CL:0000075;1.51e-18;27!CL:0002077;5.62e-13;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,5.46e-60,3;CL:0000148,3.13e-32,10;CL:0000541,3.13e-32,10;CL:0000710,5.70e-25,20;CL:0000147,3.53e-23,14;CL:0000075,1.46e-18,27;CL:0002077,8.79e-15,34;CL:0000133,2.74e-08,59;CL:0000333,8.44e-08,41;CL:0000221,7.72e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;1.82e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.82e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.45e-24!57;UBERON:0005068!3.45e-24!57;UBERON:0006241!3.45e-24!57;UBERON:0007135!3.45e-24!57;UBERON:0001017!3.47e-22!82;UBERON:0005743!6.46e-22!86;UBERON:0007023!5.96e-21!115;UBERON:0002616!6.23e-20!59;UBERON:0000955!8.18e-19!69;UBERON:0006238!8.18e-19!69;UBERON:0000073!1.46e-18!94;UBERON:0001016!1.46e-18!94;UBERON:0003075!1.78e-18!86;UBERON:0007284!1.78e-18!86;UBERON:0002346!4.32e-17!90;UBERON:0003076!1.27e-14!15;UBERON:0003057!1.27e-14!15;UBERON:0002020!2.80e-14!34;UBERON:0003528!2.80e-14!34;UBERON:0001893!4.59e-14!34;UBERON:0004733!1.49e-13!12;UBERON:0002028!1.49e-13!12;UBERON:0007277!1.49e-13!12;UBERON:0002791!2.71e-13!33;UBERON:0002780!3.60e-13!41;UBERON:0001890!3.60e-13!41;UBERON:0006240!3.60e-13!41;UBERON:0003080!1.06e-12!42;UBERON:0001869!2.20e-12!32;UBERON:0004732!2.83e-12!13;UBERON:0003056!2.45e-10!61;UBERON:0002420!6.84e-10!9;UBERON:0007245!6.84e-10!9;UBERON:0010009!6.84e-10!9;UBERON:0010011!6.84e-10!9;UBERON:0000454!6.84e-10!9;UBERON:0000033!6.85e-10!123;UBERON:0002308!7.10e-10!9;UBERON:0000125!7.10e-10!9;UBERON:0002680!9.80e-10!9;UBERON:0001895!9.80e-10!9;UBERON:0010092!9.80e-10!9;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0001950!1.03e-08!20;UBERON:0002298!2.52e-08!8;UBERON:0004121!3.30e-08!169;UBERON:0000924!9.74e-08!173;UBERON:0006601!9.74e-08!173;UBERON:0002619!1.15e-07!22;UBERON:0009663!1.43e-07!7;UBERON:0000956!1.89e-07!25;UBERON:0000203!1.89e-07!25;UBERON:0000369!9.07e-07!4;UBERON:0002435!9.07e-07!4;UBERON:0000204!9.07e-07!4;UBERON:0010082!9.07e-07!4 | |ontology_enrichment_uberon=UBERON:0001049!3.45e-24!57;UBERON:0005068!3.45e-24!57;UBERON:0006241!3.45e-24!57;UBERON:0007135!3.45e-24!57;UBERON:0001017!3.47e-22!82;UBERON:0005743!6.46e-22!86;UBERON:0007023!5.96e-21!115;UBERON:0002616!6.23e-20!59;UBERON:0000955!8.18e-19!69;UBERON:0006238!8.18e-19!69;UBERON:0000073!1.46e-18!94;UBERON:0001016!1.46e-18!94;UBERON:0003075!1.78e-18!86;UBERON:0007284!1.78e-18!86;UBERON:0002346!4.32e-17!90;UBERON:0003076!1.27e-14!15;UBERON:0003057!1.27e-14!15;UBERON:0002020!2.80e-14!34;UBERON:0003528!2.80e-14!34;UBERON:0001893!4.59e-14!34;UBERON:0004733!1.49e-13!12;UBERON:0002028!1.49e-13!12;UBERON:0007277!1.49e-13!12;UBERON:0002791!2.71e-13!33;UBERON:0002780!3.60e-13!41;UBERON:0001890!3.60e-13!41;UBERON:0006240!3.60e-13!41;UBERON:0003080!1.06e-12!42;UBERON:0001869!2.20e-12!32;UBERON:0004732!2.83e-12!13;UBERON:0003056!2.45e-10!61;UBERON:0002420!6.84e-10!9;UBERON:0007245!6.84e-10!9;UBERON:0010009!6.84e-10!9;UBERON:0010011!6.84e-10!9;UBERON:0000454!6.84e-10!9;UBERON:0000033!6.85e-10!123;UBERON:0002308!7.10e-10!9;UBERON:0000125!7.10e-10!9;UBERON:0002680!9.80e-10!9;UBERON:0001895!9.80e-10!9;UBERON:0010092!9.80e-10!9;UBERON:0000153!1.22e-09!129;UBERON:0007811!1.22e-09!129;UBERON:0001950!1.03e-08!20;UBERON:0002298!2.52e-08!8;UBERON:0004121!3.30e-08!169;UBERON:0000924!9.74e-08!173;UBERON:0006601!9.74e-08!173;UBERON:0002619!1.15e-07!22;UBERON:0009663!1.43e-07!7;UBERON:0000956!1.89e-07!25;UBERON:0000203!1.89e-07!25;UBERON:0000369!9.07e-07!4;UBERON:0002435!9.07e-07!4;UBERON:0000204!9.07e-07!4;UBERON:0010082!9.07e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;7.76e-08;3!UBERON:0005290;7.76e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,8.29e-08,3;UBERON:0005290,8.29e-08,3;UBERON:0010096,8.29e-08,3 | |||
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|short_description=p6@NFATC2 | |short_description=p6@NFATC2 | ||
}} | }} |
Latest revision as of 23:29, 16 September 2015
Short description: | p6@NFATC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NFATC2_5end |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | -245bp_to_ENST00000371567_5end |
EntrezGene: | NFATC2 |
HGNC: | 7776 |
UniProt: | F8W8G4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 5.46e-60 | 3 |
melanocyte | 3.13e-32 | 10 |
melanoblast | 3.13e-32 | 10 |
neurecto-epithelial cell | 5.70e-25 | 20 |
pigment cell | 3.53e-23 | 14 |
columnar/cuboidal epithelial cell | 1.46e-18 | 27 |
ecto-epithelial cell | 8.79e-15 | 34 |
neurectodermal cell | 2.74e-08 | 59 |
migratory neural crest cell | 8.44e-08 | 41 |
ectodermal cell | 7.72e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 8.29e-08 | 3 |
myelencephalon | 8.29e-08 | 3 |
future myelencephalon | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.82e-11 | 2 |