FFCP PHASE1:Hg19::chr6:4773291..4773301,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9425 | |EntrezGene=9425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1811 | |HGNC=1811 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000483019_5end | |association_with_transcript=16bp_to_ENST00000483019_5end | ||
|cluster_id=chr6:4773291..4773301,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_8_at_CDYL_5end | |description=CAGE_peak_8_at_CDYL_5end | ||
|id=chr6:4773291..4773301,+ | |id=chr6:4773291..4773301,+ | ||
|ontology_enrichment_celltype=CL:0002322!4.76e-66!5;CL:0000039!3.83e-30!7;CL:0000586!3.83e-30!7;CL:0000540!1.02e-20!6;CL:0000031!1.02e-20!6;CL:0000404!1.02e-20!6;CL:0000047!1.05e-15!8;CL:0000148!1.82e-12!10;CL:0000541!1.82e-12!10;CL:0000147!4.55e-09!14;CL:0000133!1.54e-07!59 | |ontology_enrichment_celltype=CL:0002322!4.76e-66!5;CL:0000039!3.83e-30!7;CL:0000586!3.83e-30!7;CL:0000540!1.02e-20!6;CL:0000031!1.02e-20!6;CL:0000404!1.02e-20!6;CL:0000047!1.05e-15!8;CL:0000148!1.82e-12!10;CL:0000541!1.82e-12!10;CL:0000147!4.55e-09!14;CL:0000133!1.54e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.45e-66;5!CL:0000039;3.83e-30;7!CL:0000586;3.83e-30;7!CL:0002321;3.80e-22;15!CL:0000540;1.02e-20;6!CL:0000404;1.02e-20;6!CL:0000148;1.78e-12;10!CL:0000147;4.49e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.76e-66,5;CL:0000039,3.83e-30,7;CL:0000586,3.83e-30,7;CL:0000540,1.02e-20,6;CL:0000031,1.02e-20,6;CL:0000404,1.02e-20,6;CL:0000047,1.05e-15,8;CL:0000148,1.82e-12,10;CL:0000541,1.82e-12,10;CL:0000147,4.55e-09,14;CL:0000133,1.54e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.04e-32;10!UBERON:0005564;1.04e-32;10!CL:0000031;1.02e-20;6 | |||
|ontology_enrichment_disease=DOID:3095!3.60e-21!22;DOID:2994!3.60e-21!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.66e-21;22!DOID:2994;3.66e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.60e-21,22;DOID:2994,3.60e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.97e-26!8;UBERON:0003135!2.47e-19!11;UBERON:0000991!1.22e-15!21;UBERON:0009196!1.22e-15!21;UBERON:0009117!1.22e-15!21;UBERON:0005564!1.22e-15!21;UBERON:0004176!6.25e-15!22;UBERON:0003101!8.11e-10!22;UBERON:0000079!8.11e-10!22;UBERON:0002323!4.07e-07!46;UBERON:0003133!8.13e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.97e-26;8!UBERON:0003135;2.47e-19;11!UBERON:0000991;1.26e-15;21!UBERON:0000922;3.60e-13;49!UBERON:0003101;8.11e-10;22!UBERON:0000079;8.11e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.97e-26,8;UBERON:0003135,2.47e-19,11;UBERON:0000991,1.22e-15,21;UBERON:0009196,1.22e-15,21;UBERON:0009117,1.22e-15,21;UBERON:0005564,1.22e-15,21;UBERON:0004176,6.25e-15,22;UBERON:0003101,8.11e-10,22;UBERON:0000079,8.11e-10,22;UBERON:0002323,4.07e-07,46;UBERON:0003133,8.13e-07,48 | |||
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|short_description=p8@CDYL | |short_description=p8@CDYL | ||
}} | }} |
Latest revision as of 04:11, 19 September 2015
Short description: | p8@CDYL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDYL_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 16bp_to_ENST00000483019_5end |
EntrezGene: | CDYL |
HGNC: | 1811 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.76e-66 | 5 |
germ line cell | 3.83e-30 | 7 |
germ cell | 3.83e-30 | 7 |
neuron | 1.02e-20 | 6 |
neuroblast | 1.02e-20 | 6 |
electrically signaling cell | 1.02e-20 | 6 |
neuronal stem cell | 1.05e-15 | 8 |
melanocyte | 1.82e-12 | 10 |
melanoblast | 1.82e-12 | 10 |
pigment cell | 4.55e-09 | 14 |
neurectodermal cell | 1.54e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 1.97e-26 | 8 |
male reproductive organ | 2.47e-19 | 11 |
gonad | 1.22e-15 | 21 |
indifferent external genitalia | 1.22e-15 | 21 |
indifferent gonad | 1.22e-15 | 21 |
gonad primordium | 1.22e-15 | 21 |
external genitalia | 6.25e-15 | 22 |
male organism | 8.11e-10 | 22 |
male reproductive system | 8.11e-10 | 22 |
body cavity | 4.07e-07 | 46 |
reproductive organ | 8.13e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.60e-21 | 22 |
germ cell cancer | 3.60e-21 | 22 |