FFCP PHASE1:Hg19::chr6:73933968..73933992,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:73933968..73933992,- | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_at_chr6:73933968..73933992,- | |description=CAGE_peak_at_chr6:73933968..73933992,- | ||
|id=chr6:73933968..73933992,- | |id=chr6:73933968..73933992,- | ||
|ontology_enrichment_celltype=CL:0000039!9.31e-17!7;CL:0000586!9.31e-17!7 | |ontology_enrichment_celltype=CL:0000039!9.31e-17!7;CL:0000586!9.31e-17!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.27e-24;7!CL:0000586;3.27e-24;7!CL:0000047;2.60e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.27e-24,7;CL:0000586,3.27e-24,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.59e-17;10!UBERON:0005564;3.59e-17;10!UBERON:0010122;2.60e-10;2 | |||
|ontology_enrichment_disease=DOID:1749!2.14e-12!14;DOID:3151!2.02e-08!1;DOID:3149!2.02e-08!1;DOID:3112!4.11e-08!1;DOID:305!2.79e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.97e-19;1!DOID:3149;2.97e-19;1!DOID:3451;2.60e-10;2!DOID:4159;2.60e-10;2!DOID:0060122;2.60e-10;2!DOID:3095;3.84e-08;22!DOID:2994;3.84e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,5.62e-19,1;DOID:3149,5.62e-19,1;DOID:3451,3.58e-10,2;DOID:4159,3.58e-10,2;DOID:0060122,3.58e-10,2;DOID:3095,3.84e-08,22;DOID:2994,3.84e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0009663!4.39e-25!7;UBERON:0005383!6.21e-22!3;UBERON:0005382!6.21e-22!3;UBERON:0002308!1.74e-19!9;UBERON:0002420!1.74e-19!9;UBERON:0000125!1.74e-19!9;UBERON:0007245!1.74e-19!9;UBERON:0010009!1.74e-19!9;UBERON:0010011!1.74e-19!9;UBERON:0000454!1.74e-19!9;UBERON:0000369!1.34e-16!4;UBERON:0002435!1.34e-16!4;UBERON:0000204!1.34e-16!4;UBERON:0010082!1.34e-16!4;UBERON:0001873!3.61e-15!2;UBERON:0010122!3.61e-15!2;UBERON:0001875!5.15e-15!2;UBERON:0006514!5.15e-15!2;UBERON:0000473!1.67e-14!8;UBERON:0003135!1.38e-10!11;UBERON:0000997!1.41e-08!1;UBERON:0005056!1.41e-08!1;UBERON:0001874!1.63e-08!1;UBERON:0004176!5.96e-08!22;UBERON:0003343!9.14e-08!4;UBERON:0004785!9.14e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;7.92e-25;3!UBERON:0005382;7.92e-25;3!UBERON:0009663;1.19e-23;7!UBERON:0000473;2.78e-21;8!UBERON:0001874;2.97e-19;1!UBERON:0000997;2.97e-19;1!UBERON:0005056;2.97e-19;1!UBERON:0004176;2.97e-19;1!UBERON:0000369;6.76e-19;4!UBERON:0002435;6.76e-19;4!UBERON:0000204;6.76e-19;4!UBERON:0002420;1.45e-18;9!UBERON:0000125;1.45e-18;9!UBERON:0007245;1.45e-18;9!UBERON:0002308;1.45e-18;9!UBERON:0010009;1.45e-18;9!UBERON:0010011;1.45e-18;9!UBERON:0000454;1.45e-18;9!UBERON:0003135;1.13e-15;11!UBERON:0001873;2.60e-10;2!UBERON:0001875;2.60e-10;2!UBERON:0006514;2.60e-10;2!UBERON:0000991;1.67e-08;21!UBERON:0003101;3.84e-08;22!UBERON:0000079;3.84e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.01e-24,3;UBERON:0005382,1.01e-24,3;UBERON:0009663,1.06e-23,7;UBERON:0000473,2.79e-21,8;UBERON:0000997,2.25e-19,1;UBERON:0005056,2.25e-19,1;UBERON:0001874,3.25e-19,1;UBERON:0000369,8.11e-19,4;UBERON:0002435,8.11e-19,4;UBERON:0000204,8.11e-19,4;UBERON:0010082,8.11e-19,4;UBERON:0002420,1.32e-18,9;UBERON:0000125,1.32e-18,9;UBERON:0007245,1.32e-18,9;UBERON:0002308,1.32e-18,9;UBERON:0010009,1.32e-18,9;UBERON:0010011,1.32e-18,9;UBERON:0000454,1.32e-18,9;UBERON:0003135,1.13e-15,11;UBERON:0004176,1.18e-13,22;UBERON:0001875,1.89e-10,2;UBERON:0006514,1.89e-10,2;UBERON:0001873,2.99e-10,2;UBERON:0010122,2.99e-10,2;UBERON:0000991,1.67e-08,21;UBERON:0009196,1.67e-08,21;UBERON:0009117,1.67e-08,21;UBERON:0005564,1.67e-08,21;UBERON:0003101,3.84e-08,22;UBERON:0000079,3.84e-08,22 | |||
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|short_description=p@chr6:73933968..73933992,- | |short_description=p@chr6:73933968..73933992,- | ||
}} | }} |
Latest revision as of 03:04, 31 July 2015
Short description: | p@chr6:73933968..73933992, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:73933968..73933992, - |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.27e-24 | 7 |
germ cell | 3.27e-24 | 7 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 1.01e-24 | 3 |
dorsal striatum | 1.01e-24 | 3 |
telencephalic nucleus | 1.06e-23 | 7 |
testis | 2.79e-21 | 8 |
mammalian vulva | 2.25e-19 | 1 |
external female genitalia | 2.25e-19 | 1 |
putamen | 3.25e-19 | 1 |
corpus striatum | 8.11e-19 | 4 |
striatum | 8.11e-19 | 4 |
ventral part of telencephalon | 8.11e-19 | 4 |
future corpus striatum | 8.11e-19 | 4 |
basal ganglion | 1.32e-18 | 9 |
neural nucleus | 1.32e-18 | 9 |
nuclear complex of neuraxis | 1.32e-18 | 9 |
nucleus of brain | 1.32e-18 | 9 |
aggregate regional part of brain | 1.32e-18 | 9 |
collection of basal ganglia | 1.32e-18 | 9 |
cerebral subcortex | 1.32e-18 | 9 |
male reproductive organ | 1.13e-15 | 11 |
external genitalia | 1.18e-13 | 22 |
globus pallidus | 1.89e-10 | 2 |
pallidum | 1.89e-10 | 2 |
caudate nucleus | 2.99e-10 | 2 |
future caudate nucleus | 2.99e-10 | 2 |
gonad | 1.67e-08 | 21 |
indifferent external genitalia | 1.67e-08 | 21 |
indifferent gonad | 1.67e-08 | 21 |
gonad primordium | 1.67e-08 | 21 |
male organism | 3.84e-08 | 22 |
male reproductive system | 3.84e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 5.62e-19 | 1 |
keratoacanthoma | 5.62e-19 | 1 |
skin carcinoma | 3.58e-10 | 2 |
skin cancer | 3.58e-10 | 2 |
integumentary system cancer | 3.58e-10 | 2 |
germ cell and embryonal cancer | 3.84e-08 | 22 |
germ cell cancer | 3.84e-08 | 22 |